Glycoside Hydrolase Family 28

Activities in Familypolygalacturonase (EC 3.2.1.15); α-L-rhamnosidase (EC 3.2.1.40); exo-polygalacturonase (EC 3.2.1.67); exo-polygalacturonosidase (EC 3.2.1.82); rhamnogalacturonase (EC 3.2.1.171); rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173); endo-xylogalacturonan hydrolase (EC 3.2.1.-)
Mechanism Inverting
ClanGH-N
3D Structure Status( β )-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (7016); Uniprot accession (1123); PDB accession (18); 3D entries (17); cryst (3)
All (5235) Archaea (11) Bacteria (2536) Eukaryota (2682) unclassified (6) Structure (17 - 3 cryst) Characterized (219)
| 1 | ... | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | ... | 26 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 WS87_00875   Burkholderia sp. MSMB0856 AOJ85321.1    
 WS87_00475   Burkholderia sp. MSMB0856 AOJ85264.1    
 WS54_30235   Burkholderia sp. NRF60-BP8 AOI80642.1    
 WS54_11950   Burkholderia sp. NRF60-BP8 AOI76932.1    
 BSFP_033790   Burkholderia stabilis FERMP-21014 BAX60518.1    
 BSFP_067790   Burkholderia stabilis FERMP-21014 BAX63906.1    
 A8H33_07480   Burkholderia vietnamiensis FDAARGOS_239 AVR13275.1    
 Bcep1808_3851   Burkholderia vietnamiensis G4 ABO56834.1 A4JKN1  
 AK36_4860   Burkholderia vietnamiensis LMG 10929 AJY03121.1    
 bhn_I1952   Butyrivibrio hungatei MB2003 AOZ96985.1    
 bhn_I2679   Butyrivibrio hungatei MB2003 AOZ97711.1    
 bpr_I2505   Butyrivibrio proteoclasticus B316 ADL35238.1 E0RVT0  
 bpr_I2854   Butyrivibrio proteoclasticus B316 ADL35584.1 E0S097  
 Athe_2380 / Cbes2380   Caldicellulosiruptor bescii DSM 6725 ACM61449.1 B9MNB8  
 Athe_1569   Caldicellulosiruptor bescii DSM 6725 ACM60667.1 B9MK09  
 Calhy_0137   Caldicellulosiruptor hydrothermalis 108 ADQ05898.1 E4QA23  
 Calhy_1166   Caldicellulosiruptor hydrothermalis 108 ADQ06886.1 E4Q8W7  
 Calkr_1976   Caldicellulosiruptor kristjanssonii I77R1B ADQ41451.1 E4S4V1  
 Calkr_2305   Caldicellulosiruptor kristjanssonii I77R1B ADQ41758.1 E4S6X5  
 Calkro_0152   Caldicellulosiruptor kronotskyensis 2002 ADQ45068.1 E4SCT5  
 Calkro_0342   Caldicellulosiruptor kronotskyensis 2002 ADQ45245.1 E4SDV8  
 Calla_0050   Caldicellulosiruptor lactoaceticus 6A AEM72745.1    
 Calla_0145   Caldicellulosiruptor lactoaceticus 6A AEM72830.1    
 Calla_0381   Caldicellulosiruptor lactoaceticus 6A AEM73047.1    
 COB47_2144   Caldicellulosiruptor obsidiansis OB47 ADL43391.1 D9TGZ4  
 COB47_0984   Caldicellulosiruptor obsidiansis OB47 ADL42285.1 D9TJV3  
 Calow_2114   Caldicellulosiruptor owensensis OL ADQ05623.1 E4Q6L6  
 Csac_0361   Caldicellulosiruptor saccharolyticus DSM 8903 ABP66002.1 A4XGG7  
 Csac_0664   Caldicellulosiruptor saccharolyticus DSM 8903 ABP66284.1 A4XH99  
 Acid_0671   Candidatus Solibacter usitatus Ellin6076 ABJ81672.1 Q02B94  
 Acid_0672   Candidatus Solibacter usitatus Ellin6076 ABJ81673.1 Q02B93  
 Acid_0674   Candidatus Solibacter usitatus Ellin6076 ABJ81675.1 Q02B91  
 Acid_1250   Candidatus Solibacter usitatus Ellin6076 ABJ82244.1 Q029N2  
 Acid_2983   Candidatus Solibacter usitatus Ellin6076 ABJ83967.1 Q022X9  
 Acid_3985   Candidatus Solibacter usitatus Ellin6076 ABJ84952.1 Q01ZG3  
 Acid_4057   Candidatus Solibacter usitatus Ellin6076 ABJ85022.1 Q01Z93  
 Acid_4847   Candidatus Solibacter usitatus Ellin6076 ABJ85806.1 Q01X09  
 Acid_6868   Candidatus Solibacter usitatus Ellin6076 ABJ87782.1 Q01RD8  
 Acid_7770 (probable fragment)   Candidatus Solibacter usitatus Ellin6076 ABJ88668.1 Q01NV2  
 Acid_7773   Candidatus Solibacter usitatus Ellin6076 ABJ88671.1 Q01NU9  
 CGC48_06355   Capnocytophaga cynodegmi G7591 ATA68284.1    
 C2869_22345   Catenovulum sp. CCB-QB4 AWB69242.1    
 C2869_22120   Catenovulum sp. CCB-QB4 AWB69201.1    
 Caci_3629   Catenulispora acidiphila DSM 44928 ACU72532.1 C7QAN3  
 Caci_3630   Catenulispora acidiphila DSM 44928 ACU72533.1 C7QBR4  
 Caci_6877   Catenulispora acidiphila DSM 44928 ACU75715.1 C7Q3F0  
 Caci_3464   Catenulispora acidiphila DSM 44928 ACU72370.1 C7Q950  
 Cseg_2732   Caulobacter segnis ATCC 21756 ADG11181.1 D5VL08  
 B7G68_13970   Caulobacter segnis TK0059 AVQ04462.1    
 CA607_03060   Caulobacter vibrioides CB1 ATC27417.1    
 CC0572   Caulobacter vibrioides CB15 AAK22558.1
NP_419390.1
Q9AAM5  
 CA608_03005   Caulobacter vibrioides CB2 ATC23572.1    
 CCNA_00608   Caulobacter vibrioides NA1000 ACL94073.1 B8H0H4  
 LH89_13825   Cedecea neteri ND14b AIR70226.1    
 LH89_17115   Cedecea neteri ND14b AIR70851.1    
 LH89_06495   Cedecea neteri ND14b AIR68876.1    
 IMCC12053_3089   Celeribacter marinus IMCC 12053 ALI57036.1    
 Celal_2476   Cellulophaga algicola DSM 14237 ADV49764.1    
 Celal_2479   Cellulophaga algicola DSM 14237 ADV49767.1    
 M666_09660   Cellulophaga baltica 18 AIZ41826.1    
 M666_09675   Cellulophaga baltica 18 AIZ41828.1    
 M667_09745   Cellulophaga baltica NN016038 AIY13475.1    
 M667_09730   Cellulophaga baltica NN016038 AIY15326.1    
 A5M85_02260   Cellulophaga lytica DAU203 APU09152.1    
 Celly_0434   Cellulophaga lytica DSM 7489 ADY28269.1    
 IX49_01870   Cellulophaga lytica HI1 AIM59338.1    
 ORF   Cellulosilyticum ruminicola CGMCC 1.5065 ACZ98650.1 D2KFP8  
 CJA_0172 (Pga28A)   Cellvibrio japonicus Ueda107 ACE86080.1 B3PGB7  
 CBR65_11470   Cellvibrio sp. PSBB006 ARU27996.1    
 CBR65_17330   Cellvibrio sp. PSBB006 ARU29059.1    
 B0D95_13025   Cellvibrio sp. PSBB023 AQT62443.1    
 B0D95_19360   Cellvibrio sp. PSBB023 AQT62542.1    
 Z042_11045   Chania multitudinisentens RB-25 AHG20102.1
AHG20102.2
   
 Z042_19390   Chania multitudinisentens RB-25 AHG21527.1    
 Z042_26490   Chania multitudinisentens RB-25 AJW29005.1    
 Cpin_5506   Chitinophaga pinensis DSM 2588 ACU62935.1 C7PV26  
 Cpin_5903   Chitinophaga pinensis DSM 2588 ACU63321.1 C7PEB2  
 CK934_01170   Chitinophaga sp. MD30 ASZ09680.1    
 CK934_01175   Chitinophaga sp. MD30 ASZ09681.1    
 DLD77_09855   Chitinophaga sp. T22 AWO01979.1    
 A0O34_05050   Chryseobacterium glaciei IHBB 10212 ANF49936.1    
 A0O34_16000   Chryseobacterium glaciei IHBB 10212 ANF53202.1    
 A0O34_16090   Chryseobacterium glaciei IHBB 10212 ANF51938.1    
 ATE47_05900   Chryseobacterium sp. IHB B 17019 ALR30083.1    
 ATE47_05980   Chryseobacterium sp. IHB B 17019 ALR32508.1    
 ATE47_05805   Chryseobacterium sp. IHB B 17019 ALR30065.1    
 CCALI_02545   Chthonomonas calidirosea T49 CCW36339.1    
 AL479_13075   Citrobacter amalonaticus FDAARGOS_122 AMG93353.1    
 F384_00700   Citrobacter amalonaticus Y19 AKE57765.1    
 CI104_05095   Citrobacter farmeri AUSMDU00008141 AST78508.1    
 WM46_14050   Citrobacter freundii complex sp. CFNIH2 AUO65784.1    
 AES38_02890   Clavibacter capsici PF008 ALD14064.1    
 BEH62_14510   Clavibacter insidiosus ATCC 10253 AWG02804.1    
 VO01_14785   Clavibacter insidiosus R1-1 AJW80211.1    
 BEH61_14430   Clavibacter insidiosus R1-3 AWF99701.1    
 CMM_2871   Clavibacter michiganensis subsp. michiganensis NCPPB 382 CAN02957.1 A5CV18  
 CMN_02839 (PgaA)   Clavibacter nebraskensis NCPPB 2581 CCE76765.1    
 CMS2178   Clavibacter sepedonicus ATCC33113 CAQ02272.1 B0RFQ2  
 CAC0355   Clostridium acetobutylicum ATCC 824 AAK78335.1
NP_346995.1
Q97M45  
 CAC3684   Clostridium acetobutylicum ATCC 824 AAK81605.1
NP_350265.1
Q97D05  
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