Glycoside Hydrolase Family 28

Activities in Familypolygalacturonase (EC 3.2.1.15); α-L-rhamnosidase (EC 3.2.1.40); exo-polygalacturonase (EC 3.2.1.67); exo-polygalacturonosidase (EC 3.2.1.82); rhamnogalacturonase (EC 3.2.1.171); rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173); xylogalacturonan hydrolase (EC 3.2.1.-)
Mechanism Inverting
ClanGH-N
3D Structure Status( β )-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (8855); Uniprot accession (1123); PDB accession (18); 3D entries (17); cryst (3)
All (7038) Archaea (11) Bacteria (3616) Eukaryota (3404) Viruses (1) unclassified (6) Structure (17 - 3 cryst) Characterized (219)
| 1 | ... | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | ... | 37 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 VIC01_02766 (Pgl_4)   Bacteroides vulgatus VIC01 QEW37188.1    
 VIC01_01102   Bacteroides vulgatus VIC01 QEW35608.1    
 VIC01_01075 (Pehx_4)   Bacteroides vulgatus VIC01 QEW35583.1    
 VIC01_01105 (fragment)   Bacteroides vulgatus VIC01 QEW35611.1    
 VIC01_03830 (Pgl_6)   Bacteroides vulgatus VIC01 QEW38208.1    
 VIC01_02781 (fragment)   Bacteroides vulgatus VIC01 QEW37203.1    
 FKZ68_10135   Bacteroides xylanisolvens H207 QDH54562.1    
 FKZ68_13035   Bacteroides xylanisolvens H207 QDH55088.1    
 FKZ68_10035   Bacteroides xylanisolvens H207 QDH54544.1    
 FKZ68_09790   Bacteroides xylanisolvens H207 QDH54501.1    
 FKZ68_08150   Bacteroides xylanisolvens H207 QDH57554.1    
 FKZ68_07965   Bacteroides xylanisolvens H207 QDH54171.1    
 FKZ68_16055   Bacteroides xylanisolvens H207 QDH55639.1    
 FKZ68_09890   Bacteroides xylanisolvens H207 QDH57575.1    
 FKZ68_09855   Bacteroides xylanisolvens H207 QDH54513.1    
 FKZ68_10100   Bacteroides xylanisolvens H207 QDH57578.1    
 FKZ68_13085   Bacteroides xylanisolvens H207 QDH55097.1    
 FKZ68_10015   Bacteroides xylanisolvens H207 QDH54540.1    
 FKZ68_09865   Bacteroides xylanisolvens H207 QDH54514.1    
 BXY_06410   Bacteroides xylanisolvens XB1A CBK65856.1 D6D761  
 BXY_32580   Bacteroides xylanisolvens XB1A CBK68264.1 D6D1G2  
 BXY_32720 (partial)   Bacteroides xylanisolvens XB1A CBK68277.1 D6D1H5  
 BXY_32130   Bacteroides xylanisolvens XB1A CBK68220.1 D6D1B8  
 BXY_32150   Bacteroides xylanisolvens XB1A CBK68222.1 D6D1C0  
 BXY_32210   Bacteroides xylanisolvens XB1A CBK68228.1 D6D1C6  
 BXY_32450   Bacteroides xylanisolvens XB1A CBK68251.1 D6D1E9  
 BXY_32940   Bacteroides xylanisolvens XB1A CBK68298.1 D6D1J6  
 BXY_41460   Bacteroides xylanisolvens XB1A CBK69057.1 D6D3Q5  
 C4H11_12710   Bacteroides zoogleoformans ATCC 33285 AVM53658.1    
 IX83_05860   Basilea psittacipulmonis DSM 24701 AIL32907.1    
 Belba_2495   Belliella baltica DSM 15883 AFL85050.1    
 BA20089_05160   Bifidobacterium asteroides DSM 20089 ATO41582.1    
 BA20089_06125   Bifidobacterium asteroides DSM 20089 ATO41749.1    
 BAST_1173   Bifidobacterium asteroides PRL2011 AFU71746.1    
 BAST_1365   Bifidobacterium asteroides PRL2011 AFU71934.1    
 BBSC_0930   Bifidobacterium scardovii JCM 12489 = DSM 13734 BAQ31010.1    
 BBSC_0945 (fragment)   Bifidobacterium scardovii JCM 12489 = DSM 13734 BAQ31025.1    
 B5J99_17895   Blastomonas fulva T2 ASR53096.1    
 BSY18_1703   Blastomonas sp. RAC04 AOG01170.1    
 B0B51_09105   blood disease bacterium A2-HR MARDI AQW30126.1    
 B0B51_16970   blood disease bacterium A2-HR MARDI AQW31670.1    
 BDB_mp40112 (Pgla2)   blood disease bacterium R229 CCA82827.1    
 BDB_mp80066 (PehC)   blood disease bacterium R229 CCA83875.1    
 BDB_110041   blood disease bacterium R229 CCA80612.1    
 Bfae_29200   Brachybacterium faecium DSM 4810 ACU86681.1 C7MA11  
 CFK41_01740   Brachybacterium ginsengisoli DCY80 ATG56427.1    
 Bdiaspc4_10105   Bradyrhizobium diazoefficiens 110spc4 QBP20831.1    
 NK6_4782 (fragment)   Bradyrhizobium diazoefficiens NK6 BAR57948.1    
 AAV28_06820   Bradyrhizobium diazoefficiens USDA 110 AND87550.1    
 blr1993   Bradyrhizobium diazoefficiens USDA 110 AAG60962.1
BAC47258.1
NP_768633.1
H7C6S1
Q9AN16
 
 BD122_10225   Bradyrhizobium diazoefficiens USDA 122 APO50623.1    
 DI395_11670   Bradyrhizobium diazoefficiens XF7 AWO89067.1    
 X265_37235   Bradyrhizobium guangdongense CCBAU 51649 QAU43303.1    
 XH91_36435   Bradyrhizobium guangzhouense CCBAU 51670 QAU50796.1    
 RN69_38125   Bradyrhizobium japonicum E109 AJA65458.1    
 BKD09_RS41310   Bradyrhizobium japonicum J5 APG14810.1    
 BJS_07656 (PehA) (fragment)   Bradyrhizobium japonicum SEMIA 5079 AHY48631.1    
 BJ6T_78570   Bradyrhizobium japonicum USDA 6 BAL13103.1    
 type III effector NopAC   Bradyrhizobium japonicum USDA 6 AGH09962.1    
 type III effector NopAC   Bradyrhizobium japonicum USDA122 AGH09994.1    
 type III effector NopAC   Bradyrhizobium japonicum USDA123 AGH10024.1    
 type III effector NopAC   Bradyrhizobium japonicum USDA124 AGH10057.1    
 CIT37_03075   Bradyrhizobium ottawaense OO99 AWL91385.1    
 BCCGELA001_29025   Bradyrhizobium sp. CCGE-LA001 AMA59896.1    
 BRAD3257_7191 (PeH)   Bradyrhizobium sp. ORS 3257 SPP97981.1    
 SG09_74020   Bradyrhizobium sp. SG09 BBO08052.1    
 DAA51_38180   Bradyrhizobium sp. WBAH10 QCJ79712.1    
 DAA53_38470   Bradyrhizobium sp. WBAH23 QCJ86250.1    
 DAA61_38525   Bradyrhizobium sp. WBAH33 QCK01028.1    
 DAB18_38460   Bradyrhizobium sp. WBAH41 QCK08383.1    
 DAA57_38545   Bradyrhizobium yuanmingense WBAH30 QCJ93623.1    
 AWC36_19995   Brenneria goodwinii FRB141 ATA26209.1    
 EH206_01265   Brenneria nigrifluens ATCC 13028 QCR02964.1    
 EH207_12225   Brenneria rubrifaciens 6D370 QCR09223.1    
 JL11_06940   Brevundimonas sp. DS20 ALJ08099.1    
 A4249_03555   Brevundimonas sp. GW460-12-10-14-LB2 ANC55115.1    
 E7T10_11720   Brevundimonas sp. SGAir0440 QCQ99291.1    
 Bresu_2865   Brevundimonas subvibrioides ATCC 15264 ADL02172.1 D9QN16  
 CH72_4945   Burkholderia ambifaria AMMD AJY25870.1    
 BamMC406_5453   Burkholderia ambifaria MC40-6 ACB67897.1 B1Z2D5  
 A2T82_21130   Burkholderia cenocepacia 842 AMU08781.1    
 A2T82_33425   Burkholderia cenocepacia 842 AMU11202.1    
 A2T82_31925   Burkholderia cenocepacia 842 AMU11571.1    
 A3203_34100   Burkholderia cenocepacia 895 AMU18264.1    
 A3203_04790   Burkholderia cenocepacia 895 AMU12485.1    
 Bcen_4887 3.2.1.15 Burkholderia cenocepacia AU 1054 ABF79763.1 Q1BKU2  
 Bcen_5664   Burkholderia cenocepacia AU 1054 ABF80533.1 Q1BIM2  
 BHQ31_29060 (fragment)   Burkholderia cenocepacia CR318 AQT53982.1    
 BHQ31_33415   Burkholderia cenocepacia CR318 AQT55008.1    
 BCN122_II3220   Burkholderia cenocepacia GIMC4560:Bcn122 ARF89963.1    
 BCN122_III0212 (PglA)   Burkholderia cenocepacia GIMC4560:Bcn122 ARF90243.1    
 I35_6662 (PehC)   Burkholderia cenocepacia H111 CDN64498.1    
 I35_7207   Burkholderia cenocepacia H111 CDN64764.1    
 Bcen2424_3277   Burkholderia cenocepacia HI2424 ABK10021.1 A0AX95  
 Bcen2424_6029   Burkholderia cenocepacia HI2424 ABK12761.1 A0KC48  
 Bcen2424_6920   Burkholderia cenocepacia HI2424 ABK13648.1 A0B504  
 BCAS0196   Burkholderia cenocepacia J2315 CAR57129.1 B4EPW3  
 BCAM2783 (PehC)   Burkholderia cenocepacia J2315 CAR56646.1 B4ELI1  
 Bcenmc03_4603   Burkholderia cenocepacia MC0-3 ACA93741.1    
 B9Z07_09850   Burkholderia cenocepacia PC184 Mulks AWG29129.1    
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