Glycoside Hydrolase Family 28

Activities in Familypolygalacturonase (EC 3.2.1.15); exo-polygalacturonase (EC 3.2.1.67); exo-polygalacturonosidase (EC 3.2.1.82); rhamnogalacturonase (EC 3.2.1.171); rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173); xylogalacturonan hydrolase (EC 3.2.1.-)
Mechanism Inverting
ClanGH-N
3D Structure Statusparallel β-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (10933); Uniprot accession (1123); PDB accession (20); 3D entries (18); cryst (3)
All (9025) Archaea (16) Bacteria (4951) Eukaryota (4050) Viruses (2) unclassified (6) Structure (18 - 3 cryst) Characterized (216)
| 1 | ... | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | ... | 50 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 H8796_11685   Bacteroides sp. M10 QNL41200.1    
 H8796_11555   Bacteroides sp. M10 QNL41176.1    
 H8796_11155   Bacteroides sp. M10 QNL41099.1    
 H8796_11495   Bacteroides sp. M10 QNL41164.1    
 H8796_11285   Bacteroides sp. M10 QNL41125.1    
 H8796_11295   Bacteroides sp. M10 QNL41127.1    
 H8796_09220   Bacteroides sp. M10 QNL40738.1    
 Btheta7330_03962 (Pehx_3)   Bacteroides thetaiotaomicron 7330 ALJ43490.1    
 Btheta7330_03957 (Pgl_4)   Bacteroides thetaiotaomicron 7330 ALJ43485.1    
 Btheta7330_03955 (Pehx_2)   Bacteroides thetaiotaomicron 7330 ALJ43483.1    
 Btheta7330_03237   Bacteroides thetaiotaomicron 7330 ALJ42773.1    
 Btheta7330_02633 (Pgl_1)   Bacteroides thetaiotaomicron 7330 ALJ42175.1    
 Btheta7330_03965 (Pehx_4)   Bacteroides thetaiotaomicron 7330 ALJ43493.1    
 Btheta7330_03920 (Pehx_1)   Bacteroides thetaiotaomicron 7330 ALJ43448.1    
 Btheta7330_04100 (Pgl_5)   Bacteroides thetaiotaomicron 7330 ALJ43628.1    
 FE838_01420   Bacteroides thetaiotaomicron DSM 2079 QMW84829.1    
 FE838_10680   Bacteroides thetaiotaomicron DSM 2079 QMW86496.1    
 FE838_19285   Bacteroides thetaiotaomicron DSM 2079 QMW88039.1    
 FE838_10725   Bacteroides thetaiotaomicron DSM 2079 QMW89214.1    
 FE838_14655   Bacteroides thetaiotaomicron DSM 2079 QMW87197.1    
 FE838_10715   Bacteroides thetaiotaomicron DSM 2079 QMW89212.1    
 FE838_10690   Bacteroides thetaiotaomicron DSM 2079 QMW86498.1    
 FE838_10565   Bacteroides thetaiotaomicron DSM 2079 QMW86475.1    
 FE838_10885   Bacteroides thetaiotaomicron DSM 2079 QMW86530.1    
 BatF92_36030   Bacteroides thetaiotaomicron F9-2 BCA51661.1    
 BatF92_35840   Bacteroides thetaiotaomicron F9-2 BCA51642.1    
 BatF92_06740   Bacteroides thetaiotaomicron F9-2 BCA48732.1    
 BatF92_13840   Bacteroides thetaiotaomicron F9-2 BCA49442.1    
 BatF92_06270   Bacteroides thetaiotaomicron F9-2 BCA48685.1    
 BatF92_06430   Bacteroides thetaiotaomicron F9-2 BCA48701.1    
 BatF92_06350   Bacteroides thetaiotaomicron F9-2 BCA48693.1    
 BatF92_20140   Bacteroides thetaiotaomicron F9-2 BCA50072.1    
 BatF92_06290   Bacteroides thetaiotaomicron F9-2 BCA48687.1    
 BatF92_06330   Bacteroides thetaiotaomicron F9-2 BCA48691.1    
 I6G92_20100   Bacteroides thetaiotaomicron FDAARGOS_935 QQA07713.1    
 I6G92_14165   Bacteroides thetaiotaomicron FDAARGOS_935 QQA06616.1    
 I6G92_05535   Bacteroides thetaiotaomicron FDAARGOS_935 QQA09361.1    
 I6G92_20090   Bacteroides thetaiotaomicron FDAARGOS_935 QQA07711.1    
 I6G92_20620   Bacteroides thetaiotaomicron FDAARGOS_935 QQA07805.1    
 I6G92_20070   Bacteroides thetaiotaomicron FDAARGOS_935 QQA10748.1    
 I6G92_20060   Bacteroides thetaiotaomicron FDAARGOS_935 QQA07707.1    
 I6G92_07570   Bacteroides thetaiotaomicron FDAARGOS_935 QQA09745.1    
 I6G92_16950   Bacteroides thetaiotaomicron FDAARGOS_935 QQA07135.1    
 I6G92_07580   Bacteroides thetaiotaomicron FDAARGOS_935 QQA09746.1    
 I6G92_19890   Bacteroides thetaiotaomicron FDAARGOS_935 QQA07676.1    
 BT_4148; BT4148 (fragment)   Bacteroides thetaiotaomicron VPI-5482 AAO79253.1    
 BT2378   Bacteroides thetaiotaomicron VPI-5482 AAO77485.1
NP_811291.1
Q8A564  
 BT0127   Bacteroides thetaiotaomicron VPI-5482 AAO75234.1
NP_809040.1
Q8ABI3  
 homogalacturonanan specific α-galacturonidase / exo-polygalacturonase (BT4155;BT_4155) 3.2.1.67
3.2.1.-
Bacteroides thetaiotaomicron VPI-5482 AAO79260.1
NP_813066.1
Q8A066 5OLP[A,B]
 α-galacturonidase (BT4123;BT_4123) 3.2.1.- Bacteroides thetaiotaomicron VPI-5482 AAO79228.1
NP_813034.1
Q8A098  
 RGI specific α-galacturonidase (BT4149;BT_4149) (fragment) 3.2.1.- Bacteroides thetaiotaomicron VPI-5482 AAO79254.1
NP_813060.1
Q8A072  
 RGI-disaccharide specific α-galacturonidase (BT4146;BT_4146) 3.2.1.- Bacteroides thetaiotaomicron VPI-5482 AAO79251.1
NP_813057.1
Q8A075  
 α-galacturonidase (cleaves D-GalpA-α-1,4-D-GalpA; BT1018) 3.2.1.67 Bacteroides thetaiotaomicron VPI-5482 AAO76125.1
NP_809931.1
Q8A8Z9  
 BT4187   Bacteroides thetaiotaomicron VPI-5482 AAO79292.1
NP_813098.1
Q8A034  
 RGI-specific α-galacturonidase (BT4153;BT_4153) 3.2.1.- Bacteroides thetaiotaomicron VPI-5482 AAO79258.1
NP_813064.1
Q8A068  
 I6G58_06530   Bacteroides uniformis FDAARGOS_901 QQA31241.1    
 I6G58_06555   Bacteroides uniformis FDAARGOS_901 QQA31245.1    
 BVU_0121   Bacteroides vulgatus ATCC 8482 ABR37851.1 A6KWN7  
 BVU_0124   Bacteroides vulgatus ATCC 8482 ABR37854.1 A6KWP0  
 BVU_0153   Bacteroides vulgatus ATCC 8482 ABR37881.1 A6KWR7  
 BVU_0177   Bacteroides vulgatus ATCC 8482 ABR37905.1 A6KWU1  
 BVU_0183   Bacteroides vulgatus ATCC 8482 ABR37911.1 A6KWU7  
 BVU_0186   Bacteroides vulgatus ATCC 8482 ABR37914.1 A6KWV0  
 BVU_1747   Bacteroides vulgatus ATCC 8482 ABR39423.1 A6L159  
 BVU_1767   Bacteroides vulgatus ATCC 8482 ABR39443.1 A6L179  
 BVU_1769   Bacteroides vulgatus ATCC 8482 ABR39445.1 A6L181  
 BVU_1985   Bacteroides vulgatus ATCC 8482 ABR39657.1 A6L1U3  
 BVU_2163   Bacteroides vulgatus ATCC 8482 ABR39824.1 A6L2B0  
 BVU_2168 (fragment)   Bacteroides vulgatus ATCC 8482 ABR39829.1 A6L2B5  
 BVU_2732   Bacteroides vulgatus ATCC 8482 ABR40382.1 A6L3W8  
 FKZ68_10135   Bacteroides xylanisolvens H207 QDH54562.1    
 FKZ68_13035   Bacteroides xylanisolvens H207 QDH55088.1    
 FKZ68_10035   Bacteroides xylanisolvens H207 QDH54544.1    
 FKZ68_09790   Bacteroides xylanisolvens H207 QDH54501.1    
 FKZ68_08150   Bacteroides xylanisolvens H207 QDH57554.1    
 FKZ68_07965   Bacteroides xylanisolvens H207 QDH54171.1    
 FKZ68_16055   Bacteroides xylanisolvens H207 QDH55639.1    
 FKZ68_09890   Bacteroides xylanisolvens H207 QDH57575.1    
 FKZ68_09855   Bacteroides xylanisolvens H207 QDH54513.1    
 FKZ68_10100   Bacteroides xylanisolvens H207 QDH57578.1    
 FKZ68_13085   Bacteroides xylanisolvens H207 QDH55097.1    
 FKZ68_10015   Bacteroides xylanisolvens H207 QDH54540.1    
 FKZ68_09865   Bacteroides xylanisolvens H207 QDH54514.1    
 BXY_06410   Bacteroides xylanisolvens XB1A CBK65856.1 D6D761  
 BXY_32580   Bacteroides xylanisolvens XB1A CBK68264.1 D6D1G2  
 BXY_32720 (partial)   Bacteroides xylanisolvens XB1A CBK68277.1 D6D1H5  
 BXY_32130   Bacteroides xylanisolvens XB1A CBK68220.1 D6D1B8  
 BXY_32150   Bacteroides xylanisolvens XB1A CBK68222.1 D6D1C0  
 BXY_32210   Bacteroides xylanisolvens XB1A CBK68228.1 D6D1C6  
 BXY_32450   Bacteroides xylanisolvens XB1A CBK68251.1 D6D1E9  
 BXY_32940   Bacteroides xylanisolvens XB1A CBK68298.1 D6D1J6  
 BXY_41460   Bacteroides xylanisolvens XB1A CBK69057.1 D6D3Q5  
 C4H11_12710   Bacteroides zoogleoformans ATCC 33285 AVM53658.1    
 IX83_05860   Basilea psittacipulmonis DSM 24701 AIL32907.1    
 Belba_2495   Belliella baltica DSM 15883 AFL85050.1    
 BA20089_05160   Bifidobacterium asteroides DSM 20089 ATO41582.1    
 BA20089_06125   Bifidobacterium asteroides DSM 20089 ATO41749.1    
 BAST_1173   Bifidobacterium asteroides PRL2011 AFU71746.1    
 BAST_1365   Bifidobacterium asteroides PRL2011 AFU71934.1    
 BE0216_00030   Bifidobacterium eulemuris DSM 100216 QOL31033.1    
Top


Last update: 2021-01-11 © Copyright 1998-2021
AFMB - CNRS - Université d'Aix-Marseille