| Activities in Family | Xylogalacturonan hydrolase (EC 3.2.1.-); Endo-polygalacturonase (EC 3.2.1.15); Rhamnogalacturonase (EC 3.2.1.171); Rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173); Galacturonan α-1,4-galacturonidase (EC 3.2.1.67); Exo-poly-α-digalacturonosidase (EC 3.2.1.82); |
|---|---|
| Mechanism | Inverting a |
| Clan | GH-N |
| 3D Structure Status | parallel β-helix |
| Catalytic Nucleophile/Base | Asp |
| Catalytic Proton Donor | Asp |
| External resources | CAZypedia; HOMSTRAD; PROSITE; |
| Commercial Enzyme Provider(s) | MEGAZYME; |
| Statistics | GenBank accession (18868); Uniprot accession (179); PDB accession (25); 3D entries (20); cryst (3) |
| Bacteria | |||||||||||||||
| Protein Name | EC# | Organism | GenBank | Uniprot |
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| polygalacturonase (PehA) | 3.2.1.15 | Agrobacterium vitis CG49 | AAB51699.1 | P77818 |
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| homogalacturonan specific α-galacturonidase / exo-polygalacturonase (BT4155;BT_4155) | 3.2.1.67 | Bacteroides thetaiotaomicron VPI-5482 | AAO79260.1 NP_813066.1 |
Q8A066 |
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| PARMER_00599 (fragment) | Parabacteroides merdae ATCC 43184 | EDN88021.1 |
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| polygalacturonase-2 (PehA) | 3.2.1.15 | Pectobacterium carotovorum SCC3193 | CAA35998.1 | P26509 |
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| exo-polygalacturonase (GalU; PelB; ExoPG; TM0437; TM_0437; Tmari_0434) | 3.2.1.67 | Thermotoga maritima MSB8 | AAD35522.1 AGL49359.1 AHD17805.1 AKE28230.1 NP_228247.1 |
G4FE33 Q9WYR8 |
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| exo-polygalacturonosidase (PehX) (YeGH28) | 3.2.1.82 | Yersinia enterocolitica ATCC 9610D | AAC15064.1 | O68975 |
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| Eukaryota | |||||||||||||||
| Protein Name | EC# | Organism | GenBank | Uniprot |
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| endo-polygalacturonase (ADPG2; At2g41850) | 3.2.1.15 | Arabidopsis thaliana | AAL84942.1 AAC02763.1 AAN60351.1 AEC10040.1 |
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| endo-polygalacturonase (PGLR; At5g14650) | 3.2.1.15 | Arabidopsis thaliana | CAB87632.1 AED92058.1 ANM69799.1 NP_196969.1 |
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| polygalacturonase (Pga1) | 3.2.1.15 | Aspergillus aculeatus KSM 510 | AAC23565.1 | O74213 |
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| rhamnogalacturonase A (RhgA) | 3.2.1.171 | Aspergillus aculeatus KSM 510 / CBS 115.80 | AAA64367.1 AAB35485.1 CAA58507.2 CAB58937.1 CAB58938.1 |
Q00001 |
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| endopolygalacturonase-1 / I (PgaI;PgaA;AnPGI) | 3.2.1.15 | Aspergillus niger CBS 120.49 / N400 | CAA41693.1 | P26213 |
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| endopolygalacturonase-2 / II (PgaII;PgaB;AnPGII) | 3.2.1.15 | Aspergillus niger CBS 120.49 / N400 | CAA41694.1 | P26214 |
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| xylogalacturonan hydrolase (XghA) | 3.2.1.- | Aspergillus tubingensis | CAB65657.1 CAC07733.1 |
Q9UUZ2 |
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| endopolygalacturonase I (Pg1;endoPG I) | 3.2.1.15 | Chondrostereum purpureum | BAA08102.1 BAA96351.1 |
P79074 |
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| endopolygalacturonase (Pg1) | 3.2.1.15 | Colletotrichum lupini var. setosum (nom. inval.) SHK788 | ABL01533.1 | A1E266 |
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| endopolygalacturonase (PPSX1;SX1) | 3.2.1.15 | Dipodascus klebahnii ATCC 42397 | AAE82584.1 |
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| polygalacturonase (PSE3;SE3) | 3.2.1.15 | Dipodascus klebahnii B2 | BAA20427.1 AAB46926.1 |
P87217 |
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| endo-polygalacturonase (TlpgA) | Evansstolkia leycettana JCM 12802 | QKK82827.1 |
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| polygalacturonase (PgA;PgI;FmPG) | 3.2.1.15 | Fusarium verticillioides FC-10 | AAA74586.1 | Q07181 |
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| polygalacturonase 2 | 3.2.1.15 | Solanum lycopersicum | AAB09575.1 AAC28904.1 CAX05861.1 CBD29102.1 |
Q96487 |
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