Glycoside Hydrolase Family 28

Activities in Familypolygalacturonase (EC 3.2.1.15); α-L-rhamnosidase (EC 3.2.1.40); exo-polygalacturonase (EC 3.2.1.67); exo-polygalacturonosidase (EC 3.2.1.82); rhamnogalacturonase (EC 3.2.1.171); rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173); endo-xylogalacturonan hydrolase (EC 3.2.1.-)
Mechanism Inverting
ClanGH-N
3D Structure Status( β )-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (6609); Uniprot accession (1123); PDB accession (18); 3D entries (17); cryst (3)
All (4868) Archaea (11) Bacteria (2233) Eukaryota (2618) unclassified (6) Structure (17 - 3 cryst) Characterized (213)
| 1 | ... | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | ... | 23 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 CSTERTH_04500   [Clostridium] stercorarium subsp. thermolacticum DSM 2910 ANW98351.1    
 CFU_0329 (PglA)   Collimonas fungivorans Ter331 AEK60167.1    
 CSV91_09370   Collinsella aerofaciens indica ATP54717.1    
 Caka_0458   Coraliomargarita akajimensis DSM 45221 ADE53483.1 D5EN48  
 Corgl_1672 (possible frameshift)   Coriobacterium glomerans PW2 AEB07770.1    
 GA0004736_0874   Curtobacterium sp. 9128 SBN61977.1    
 SAMN06298216_3772   Cytophagales bacterium TFI 002 SOE23384.1    
 SAMN06298216_3906   Cytophagales bacterium TFI 002 SOE23521.1    
 SAMN06298216_3430   Cytophagales bacterium TFI 002 SOE23038.1    
 SAMN06298216_1614   Cytophagales bacterium TFI 002 SOE21142.1    
 AKL17_3864   Defluviimonas alba cai42 AMY71086.1    
 exo-polygalacturonosidase (PehX) 3.2.1.82 Dickeya chrysanthemi EC16 AAA24842.1 P15922  
 Dd1591_0152   Dickeya chrysanthemi Ech1591 ACT05045.1 C6CGH4  
 Dd1591_3030   Dickeya chrysanthemi Ech1591 ACT07852.1 C6CQQ8  
 Dd1591_0153   Dickeya chrysanthemi Ech1591 ACT05046.1 C6CGH5  
 Dd1591_0824   Dickeya chrysanthemi Ech1591 ACT05703.1 C6CLR6  
 polygalacturonase (PehN;Dda3937_04155) 3.2.1.15 Dickeya dadantii 3937 ADM97429.1
CAC83614.1
E0SDX9
Q8KKH7
 
 Dda3937_00206 (PehK)   Dickeya dadantii 3937 ADM99816.1 E0SDK6  
 exo-polygalacturonosidase (PehX;Dda3937_00261) 3.2.1.82 Dickeya dadantii 3937 ADN00467.1
CAB99320.1
E0SKR4
Q9K5A0
 
 exo-polygalacturonosidase (PehW;Dda3937_00262) 3.2.1.82 Dickeya dadantii 3937 ADN00466.1
CAB99319.1
E0SKR3
Q9K5A1
 
 exo-polygalacturonosidase (PehV;Dda3937_00263) 3.2.1.82 Dickeya dadantii 3937 ADN00465.1
CAB99318.1
E0SKR2
Q9K5A2
 
 DDI_0933   Dickeya dianthicola RNS04.9 ATO32101.1    
 DDI_4012   Dickeya dianthicola RNS04.9 ATO35180.1    
 DDI_4013   Dickeya dianthicola RNS04.9 ATO35181.1    
 Dd703_0200   Dickeya paradisiaca Ech703 ACS84017.1 C6C799  
 Dd703_0972   Dickeya paradisiaca Ech703 ACS84778.1 C6CBJ3  
 A4U42_07660   Dickeya solani IPO 2222 ANE75222.1    
 A4U42_07670   Dickeya solani IPO 2222 ANE75224.1    
 A4U42_07675   Dickeya solani IPO 2222 ANE75225.1    
 A4U42_14730   Dickeya solani IPO 2222 ANE76479.1    
 W909_15935   Dickeya zeae EC1 AJC67475.1    
 W909_19025   Dickeya zeae EC1 AJC68058.1    
 Dd586_3319   Dickeya zeae Ech586 ACZ78152.1 D2BV84  
 Dd586_3904   Dickeya zeae Ech586 ACZ78734.1 D2BYS7  
 DICTH_1900   Dictyoglomus thermophilum H-6-12 ACI19833.1 B5YBU0  
 Dtur_0172   Dictyoglomus turgidum DSM 6724 ACK41503.1 B8E1H8  
 FH5T_00825   Draconibacterium orientale FH5 AHW58602.1    
 FH5T_00855   Draconibacterium orientale FH5 AHW58606.1    
 Dfer_1529   Dyadobacter fermentans DSM 18053 ACT92774.1 C6VRS1  
 Dfer_2300   Dyadobacter fermentans DSM 18053 ACT93521.1 C6VZP3  
 Dfer_0610   Dyadobacter fermentans DSM 18053 ACT91874.1 C6W0E0  
 Echvi_0930   Echinicola vietnamensis DSM 17526 AGA77203.1    
 Echvi_1320   Echinicola vietnamensis DSM 17526 AGA77591.1    
 Echvi_1639   Echinicola vietnamensis DSM 17526 AGA77904.1    
 Echvi_1644   Echinicola vietnamensis DSM 17526 AGA77909.1    
 Echvi_3079   Echinicola vietnamensis DSM 17526 AGA79317.1    
 Echvi_3123   Echinicola vietnamensis DSM 17526 AGA79361.1    
 Echvi_3400   Echinicola vietnamensis DSM 17526 AGA79620.1    
 Echvi_3089   Echinicola vietnamensis DSM 17526 AGA79327.1    
 Emtol_1101   Emticicia oligotrophica DSM 17448 AFK02251.1    
 FA04_30555   Ensifer adhaerens Casida A ANK77029.1    
 OV14_b0350 (fragment)   Ensifer adhaerens OV14 AHK46913.1    
 SJ05684_b42240   Ensifer sojae CCBAU 05684 ASY65206.1    
 Entas_2175   Enterobacter asburiae LF7a AEN64909.1    
 Entas_2893   Enterobacter asburiae LF7a AEN65618.1    
 Entas_4481   Enterobacter asburiae LF7a AEN67177.1    
 Sequence 9108 from patent US 7041814   Enterobacter cloacae 15842 ABH79265.1    
 AM329_06045   Enterobacter cloacae AR_0002 APR41620.1    
 AM429_14855   Enterobacter cloacae AR_0050 ASB75115.1    
 AM432_04220   Enterobacter cloacae AR_0053 ASA03096.1    
 AM444_00305   Enterobacter cloacae AR_0065 ARA25012.1    
 AM383_03940   Enterobacter cloacae AR_0136 ASB82602.1    
 BFV65_10265   Enterobacter cloacae complex Hoffmann cluster III DSM 14563 AOP99975.1    
 SAMN04487932_4176   Enterobacter cloacae DG6 SMF92575.1    
 ECNIH3_10655   Enterobacter cloacae ECNIH3 AIN22756.1    
 ECNIH5_11130   Enterobacter cloacae ECNIH5 AIX59290.1    
 ECR091_10625   Enterobacter cloacae ECR091 AIN28099.1    
 B1023_13035   Enterobacter cloacae FRM ASQ77306.1    
 MS7884_4059   Enterobacter cloacae MS7884A ASP02278.1    
 LI64_11435   Enterobacter hormaechei subsp. hormaechei 34983 AJB71121.1    
 LI66_10820   Enterobacter hormaechei subsp. oharae 34399 AJB81829.1    
 LI63_013160   Enterobacter hormaechei subsp. oharae 34978 ALA02232.1    
 BFV66_14895   Enterobacter hormaechei subsp. oharae DSM 16687 AOP83250.1    
 LI62_11620   Enterobacter hormaechei subsp. steigerwaltii 34977 AJB62682.1    
 LI65_012170   Enterobacter hormaechei subsp. steigerwaltii 34998 AKZ84334.1    
 BFV68_10830   Enterobacter hormaechei subsp. steigerwaltii DSM 16691 AOP78104.1    
 Ent638_2115   Enterobacter sp. 638 ABP60790.1 A4WAR0  
 CU081_16445   Enterobacter sp. CRENT-193 ATW93162.1    
 AKI40_0883 (AdhA)   Enterobacter sp. FY-07 AMO47306.1    
 H650_23890   Enterobacter sp. R4-368 AGN88055.1    
 BFV63_11005   Enterobacter xiangfangensis LMG27195 AOP91406.1    
 F652_26   Enterobacteriaceae bacterium bta3-1 AJQ98016.1    
 D782_1496   Enterobacteriaceae bacterium strain FGI 57 AGB77506.1    
 ECBG_02107   Enterococcus casseliflavus EC20 EEV39838.1    
 CJZ72_06930   Enterococcus durans BDGP3 ASV95310.1    
 EFE1002_2261   Enterococcus faecium CUX99739.1    
 EFE1165_2680   Enterococcus faecium CVH53832.1    
 EFE1002_2267   Enterococcus faecium CUX99745.1    
 B4W81_06250   Enterococcus faecium AQY31609.1    
 B4W81_06285   Enterococcus faecium AQY31615.1    
 B4W80_12040   Enterococcus faecium AQY29602.1    
 B4W80_12075   Enterococcus faecium AQY29608.1    
 Sequence 6254 from patent US 6583275   Enterococcus faecium AAQ45696.1    
 Sequence 6652 from patent US 6583275   Enterococcus faecium AAQ46094.1
CVH53838.1
   
 CDL00_13330   Enterococcus faecium 16-346 ATU31165.1    
 CDL00_13295   Enterococcus faecium 16-346 ATU31159.1    
 AMR85_05925   Enterococcus faecium 64/3 ALF49577.1    
 AWJ25_13020   Enterococcus faecium 6E6 ALZ53102.1    
 AWJ25_13050   Enterococcus faecium 6E6 ALZ53107.1    
 AX771_12580   Enterococcus faecium ATCC 700221 AMQ98220.1    
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