Glycoside Hydrolase Family 28

Activities in FamilyXylogalacturonan hydrolase (EC 3.2.1.-);
Endo-polygalacturonase (EC 3.2.1.15);
Rhamnogalacturonase (EC 3.2.1.171);
Rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173);
Galacturonan α-1,4-galacturonidase (EC 3.2.1.67);
Exo-poly-α-digalacturonosidase (EC 3.2.1.82);
Mechanism Inverting a
ClanGH-N
3D Structure Statusparallel β-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (18868); Uniprot accession (179); PDB accession (25); 3D entries (20); cryst (3)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | ... | 101 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 AVL56_12155   Alteromonas addita R10SW13 AMJ94975.1    
 LWP59_08815   Amycolatopsis acidiphila KCTC 39523 UIJ61706.1    
 LCL61_13105   Amycolatopsis coloradensis BCA-696 WYW16486.1    
 AJAP_04570   Amycolatopsis japonica MG417-CF17 AIG73836.1    
 SAMN04489733_7545   Amycolatopsis keratiniphila FH 1893 SDU64257.1    
 BB31_02975   Amycolatopsis lurida NRRL 2430 AJK52457.1    
 ISP_008066   Amycolatopsis mediterranei ISP5501 UZF74542.1    
 ISP_008328   Amycolatopsis mediterranei ISP5501 UZF74789.1    
 ISP_001653   Amycolatopsis mediterranei ISP5501 UZF68569.1    
 ISP_004511   Amycolatopsis mediterranei ISP5501 UZF71257.1    
 B737_7960   Amycolatopsis mediterranei RB AGT88621.1    
 B737_7705   Amycolatopsis mediterranei RB AGT88366.1    
 B737_4167   Amycolatopsis mediterranei RB AGT84831.1    
 B737_1521   Amycolatopsis mediterranei RB AGT82185.1    
 RAM_40200   Amycolatopsis mediterranei S699 AEK46507.1
AFO81238.1
   
 RAM_07770   Amycolatopsis mediterranei S699 AEK40044.1
AFO75056.1
   
 RAM_41515   Amycolatopsis mediterranei S699 AEK46770.1
AFO81492.1
   
 AMES_4167   Amycolatopsis mediterranei S699 AFO77703.1
AEK42776.1
   
 AMED_1530   Amycolatopsis mediterranei U32 ADJ43343.1    
 AMED_4217   Amycolatopsis mediterranei U32 ADJ45992.1    
 AMED_7821   Amycolatopsis mediterranei U32 ADJ49529.1    
 AMED_8081   Amycolatopsis mediterranei U32 ADJ49784.1    
 QRX60_35130   Amycolatopsis mongoliensis 4-36 WIX99258.1    
 QRX60_03160   Amycolatopsis mongoliensis 4-36 WIY02890.1    
 QRX60_18950   Amycolatopsis mongoliensis 4-36 WIY05815.1    
 SD37_06155   Amycolatopsis orientalis B-37 ANN15278.1    
 SD37_31825   Amycolatopsis orientalis B-37 ANN19759.1    
 SD37_33125   Amycolatopsis orientalis B-37 ANN19977.1    
 AORI_6908   Amycolatopsis orientalis HCCB10007 AGM09490.1    
 MUY14_28905   Amycolatopsis pretoriensis FBCC-B4732 UOX85787.1    
 NQK81_31500   Amycolatopsis roodepoortensis ZEL-1 UUV29279.1    
 QP939_03285   Amycolatopsis sp. 2-2 WIV57725.1    
 HUW46_05239   Amycolatopsis sp. CA-230715 QWF81806.1    
 QRY02_45415   Amycolatopsis sp. DG1A-15b WIX88286.1    
 QRY02_29900   Amycolatopsis sp. DG1A-15b WIX85435.1    
 QRY02_10360   Amycolatopsis sp. DG1A-15b WIX90803.1    
 MJQ72_15100   Amycolatopsis sp. EV170708-02-1 UMP06056.1    
 HUT10_04640   Amycolatopsis sp. Hca4 QKV81048.1    
 HUT10_34060   Amycolatopsis sp. Hca4 QKV78250.1    
 HUT10_19510   Amycolatopsis sp. Hca4 QKV75716.1    
 CVV72_35120   Amycolatopsis sp. TNS106 QXV61714.1    
 YIM_16230 (PehX)   Amycolatopsis sp. YIM 10 QFU88426.1    
 acsn021_43270   Anaerocolumna cellulosilytica SN021 BCJ96758.1    
 acsn021_01380   Anaerocolumna cellulosilytica SN021 BCJ92569.1    
 acsn021_39780   Anaerocolumna cellulosilytica SN021 BCJ96409.1    
 acsn021_14350   Anaerocolumna cellulosilytica SN021 BCJ93866.1    
 acsn021_14830   Anaerocolumna cellulosilytica SN021 BCJ93914.1    
 acsn021_12180   Anaerocolumna cellulosilytica SN021 BCJ93649.1    
 Ana3638_16490   Anaerocolumna sedimenticola CBA3638 QHQ62181.1    
 R2R35_04350   Anaerocolumna sp. AGMB13020 WOO37735.1    
 R2R35_21070   Anaerocolumna sp. AGMB13020 WOO36260.1    
 R2R35_01060   Anaerocolumna sp. AGMB13020 WOO37113.1    
 R2R35_04630   Anaerocolumna sp. AGMB13020 WOO37788.1    
 QA584_11790   Anaerocolumna sp. AGMB13025 WFR59733.1    
 bsdcttw_34710   Anaerocolumna sp. CTTW BCK00431.1    
 bsdcttw_14020   Anaerocolumna sp. CTTW BCJ98361.1    
 FRZ59_16485   Anseongella ginsenosidimutans Gsoil 524 QEC53776.1    
 D1816_09240   Aquimarina sp. AD10 AXT63637.1    
 D1816_09245   Aquimarina sp. AD10 AXT60526.1    
 D1818_05055   Aquimarina sp. BL5 AXT50226.1    
 D1818_05065   Aquimarina sp. BL5 AXT50227.1    
 NBT05_07420   Aquimarina sp. ERC-38 UZO82297.1    
 NBT05_07430   Aquimarina sp. ERC-38 UZO82299.1    
 AQPE_4673   Aquipluma nitroreducens MeG22 BBE20480.1    
 AQPE_4143   Aquipluma nitroreducens MeG22 BBE19954.1    
 AQPE_3780   Aquipluma nitroreducens MeG22 BBE19594.1    
 AQPE_4139   Aquipluma nitroreducens MeG22 BBE19950.1    
 AQPE_1113   Aquipluma nitroreducens MeG22 BBE16966.1    
 G9X63_06860   Aquirufa antheringensis 44A-TON USQ03839.1    
 G9X62_06885   Aquirufa lenticrescens 9H-EGSE UAJ14298.1    
 FSB73_14410   Arachidicoccus ginsenosidivorans Gsoil 809 QEC74296.1    
 FSB73_14345   Arachidicoccus ginsenosidivorans Gsoil 809 QEC72685.1    
 FSB73_14370   Arachidicoccus ginsenosidivorans Gsoil 809 QEC72689.1    
 FSB73_09555 (fragment)   Arachidicoccus ginsenosidivorans Gsoil 809 QEC71873.1    
 FSB73_07725   Arachidicoccus ginsenosidivorans Gsoil 809 QEC71574.1    
 FSB73_06325 (fragment)   Arachidicoccus ginsenosidivorans Gsoil 809 QEC71344.1    
 FSB73_22715   Arachidicoccus ginsenosidivorans Gsoil 809 QEC74399.1    
 FSB73_14440   Arachidicoccus ginsenosidivorans Gsoil 809 QEC72698.1    
 FSB73_09510   Arachidicoccus ginsenosidivorans Gsoil 809 QEC74254.1    
 FSB73_09550 (fragment)   Arachidicoccus ginsenosidivorans Gsoil 809 QEC71872.1    
 D6B99_08900   Arachidicoccus soli KIS59-12 AYD49369.1    
 D6B99_03870   Arachidicoccus soli KIS59-12 AYD46826.1    
 D6B99_12125   Arachidicoccus soli KIS59-12 AYD48282.1    
 D6B99_06550   Arachidicoccus soli KIS59-12 AYD47300.1    
 D6B99_09050   Arachidicoccus soli KIS59-12 AYD47728.1    
 D6B99_09890   Arachidicoccus soli KIS59-12 AYD47873.1    
 D6B99_06365   Arachidicoccus soli KIS59-12 AYD47266.1    
 D6B99_08910   Arachidicoccus soli KIS59-12 AYD47708.1    
 D6B99_09885   Arachidicoccus soli KIS59-12 AYD47872.1    
 A9P82_10245   Arachidicoccus sp. BS20 ANI89634.1    
 K9M52_09870   Arachidicoccus terrestris 5GH13-10 UAY57355.1    
 K9M52_13915   Arachidicoccus terrestris 5GH13-10 UAY57403.1    
 K9M52_03130   Arachidicoccus terrestris 5GH13-10 UAY56037.1    
 K9M52_04135   Arachidicoccus terrestris 5GH13-10 UAY56214.1    
 K9M52_13845   Arachidicoccus terrestris 5GH13-10 UAY54527.1    
 K9M52_11950   Arachidicoccus terrestris 5GH13-10 UAY54168.1    
 K9M52_13890   Arachidicoccus terrestris 5GH13-10 UAY54535.1    
 K9M52_09895   Arachidicoccus terrestris 5GH13-10 UAY53797.1    
 JQX13_13030 (fragment)   Archangium violaceum SDU34 QRK10907.1    
 DJ013_19505   Arcticibacterium luteifluviistationis SM1504 AWW00239.1    
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