Glycoside Hydrolase Family 28

Activities in Familypolygalacturonase (EC 3.2.1.15); α-L-rhamnosidase (EC 3.2.1.40); exo-polygalacturonase (EC 3.2.1.67); exo-polygalacturonosidase (EC 3.2.1.82); rhamnogalacturonase (EC 3.2.1.171); rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173); xylogalacturonan hydrolase (EC 3.2.1.-)
Mechanism Inverting
ClanGH-N
3D Structure Status( β )-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (8855); Uniprot accession (1123); PDB accession (18); 3D entries (17); cryst (3)
All (7038) Archaea (11) Bacteria (3616) Eukaryota (3404) Viruses (1) unclassified (6) Structure (17 - 3 cryst) Characterized (219)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | ... | 37 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 DYI28_25010   Bacteroides ovatus 3725 D1 iv QDM11701.1    
 DYI28_25020   Bacteroides ovatus 3725 D1 iv QDM11703.1    
 DYI28_07670   Bacteroides ovatus 3725 D1 iv QDM08610.1    
 DYI28_08555   Bacteroides ovatus 3725 D1 iv QDM08768.1    
 DYI28_07720   Bacteroides ovatus 3725 D1 iv QDM08620.1    
 DYI28_25050   Bacteroides ovatus 3725 D1 iv QDM12753.1    
 DYI28_08585   Bacteroides ovatus 3725 D1 iv QDM08773.1    
 DYI28_24930   Bacteroides ovatus 3725 D1 iv QDM11688.1    
 DYI28_22930   Bacteroides ovatus 3725 D1 iv QDM11326.1    
 DYI28_25325   Bacteroides ovatus 3725 D1 iv QDM11755.1    
 DYI28_25160   Bacteroides ovatus 3725 D1 iv QDM11725.1    
 Bovatus_04443 (Pgl_6)   Bacteroides ovatus ATCC 8483 ALJ49036.1    
 Bovatus_04404 (Pehx_3)   Bacteroides ovatus ATCC 8483 ALJ48997.1    
 Bovatus_04398 (Pehx_2)   Bacteroides ovatus ATCC 8483 ALJ48991.1    
 Bovatus_04396 (Pehx_1)   Bacteroides ovatus ATCC 8483 ALJ48989.1    
 Bovatus_04456 (Pgl_7)   Bacteroides ovatus ATCC 8483 ALJ49049.1    
 Bovatus_03869 (Pgl_4)   Bacteroides ovatus ATCC 8483 ALJ48472.1    
 Bovatus_04989   Bacteroides ovatus ATCC 8483 ALJ49574.1    
 Bovatus_03124 (Pgl_3)   Bacteroides ovatus ATCC 8483 ALJ47732.1    
 Bovatus_00596 (Pgl_2)   Bacteroides ovatus ATCC 8483 ALJ45262.1    
 Bovatus_04440 (Pehx_4)   Bacteroides ovatus ATCC 8483 ALJ49033.1    
 Bovatus_00002   Bacteroides ovatus ATCC 8483 ALJ44674.1    
 Bovatus_00022   Bacteroides ovatus ATCC 8483 ALJ44694.1    
 Bovatus_04380 (Pgl_5)   Bacteroides ovatus ATCC 8483 ALJ48973.1    
 Bovatus_04475 (Pehx_5)   Bacteroides ovatus ATCC 8483 ALJ49068.1    
 BACOV975_02240   Bacteroides ovatus V975 SCV08450.1    
 BACOV975_02204   Bacteroides ovatus V975 SCV08416.1    
 BACOV975_02177   Bacteroides ovatus V975 SCV08391.1    
 BACOV975_02196   Bacteroides ovatus V975 SCV08408.1    
 BACOV975_02198   Bacteroides ovatus V975 SCV08410.1    
 BACOV975_02791   Bacteroides ovatus V975 SCV08997.1    
 BACOV975_00887   Bacteroides ovatus V975 SCV07130.1    
 BACOV975_01657   Bacteroides ovatus V975 SCV07882.1    
 BACOV975_02821   Bacteroides ovatus V975 SCV09027.1    
 BACOV975_03392   Bacteroides ovatus V975 SCV09598.1    
 BACOV975_02243   Bacteroides ovatus V975 SCV08453.1    
 BACOV975_02277   Bacteroides ovatus V975 SCV08484.1    
 BACOV975_02255   Bacteroides ovatus V975 SCV08465.1    
 BACOV975_02802   Bacteroides ovatus V975 SCV09008.1    
 Bacsa_0912   Bacteroides salanitronis DSM 18170 ADY35504.1    
 Bacsa_1661   Bacteroides salanitronis DSM 18170 ADY36226.1    
 Bacsa_2618   Bacteroides salanitronis DSM 18170 ADY37152.1    
 Bacsa_2691   Bacteroides salanitronis DSM 18170 ADY37224.1    
 Bacsa_2988   Bacteroides salanitronis DSM 18170 ADY37517.1    
 Bacsa_3001   Bacteroides salanitronis DSM 18170 ADY37530.1    
 Bacsa_3007   Bacteroides salanitronis DSM 18170 ADY37536.1    
 Bacsa_3303   Bacteroides salanitronis DSM 18170 ADY37829.1    
 Bacsa_3398   Bacteroides salanitronis DSM 18170 ADY37923.1    
 Bacsa_1483   Bacteroides salanitronis DSM 18170 ADY36055.1    
 Bacsa_2391   Bacteroides salanitronis DSM 18170 ADY36938.1    
 Btheta7330_03962 (Pehx_3)   Bacteroides thetaiotaomicron 7330 ALJ43490.1    
 Btheta7330_03957 (Pgl_4)   Bacteroides thetaiotaomicron 7330 ALJ43485.1    
 Btheta7330_03955 (Pehx_2)   Bacteroides thetaiotaomicron 7330 ALJ43483.1    
 Btheta7330_03237   Bacteroides thetaiotaomicron 7330 ALJ42773.1    
 Btheta7330_02633 (Pgl_1)   Bacteroides thetaiotaomicron 7330 ALJ42175.1    
 Btheta7330_03965 (Pehx_4)   Bacteroides thetaiotaomicron 7330 ALJ43493.1    
 Btheta7330_03920 (Pehx_1)   Bacteroides thetaiotaomicron 7330 ALJ43448.1    
 Btheta7330_04100 (Pgl_5)   Bacteroides thetaiotaomicron 7330 ALJ43628.1    
 BT_4148; BT4148 (fragment)   Bacteroides thetaiotaomicron VPI-5482 AAO79253.1    
 BT2378   Bacteroides thetaiotaomicron VPI-5482 AAO77485.1
NP_811291.1
Q8A564  
 BT0127   Bacteroides thetaiotaomicron VPI-5482 AAO75234.1
NP_809040.1
Q8ABI3  
 homogalacturonanan specific α-galacturonidase / exo-polygalacturonase (BT4155;BT_4155) 3.2.1.67
3.2.1.-
Bacteroides thetaiotaomicron VPI-5482 AAO79260.1
NP_813066.1
Q8A066 5OLP[A,B]
 α-galacturonidase (BT4123;BT_4123) 3.2.1.- Bacteroides thetaiotaomicron VPI-5482 AAO79228.1
NP_813034.1
Q8A098  
 RGI specific α-galacturonidase (BT4149;BT_4149) (fragment) 3.2.1.- Bacteroides thetaiotaomicron VPI-5482 AAO79254.1
NP_813060.1
Q8A072  
 RGI-disaccharide specific α-galacturonidase (BT4146;BT_4146) 3.2.1.- Bacteroides thetaiotaomicron VPI-5482 AAO79251.1
NP_813057.1
Q8A075  
 α-galacturonidase (cleaves D-GalpA-α-1,4-D-GalpA; BT1018) 3.2.1.67 Bacteroides thetaiotaomicron VPI-5482 AAO76125.1
NP_809931.1
Q8A8Z9  
 BT4187   Bacteroides thetaiotaomicron VPI-5482 AAO79292.1
NP_813098.1
Q8A034  
 RGI-specific α-galacturonidase (BT4153;BT_4153) 3.2.1.- Bacteroides thetaiotaomicron VPI-5482 AAO79258.1
NP_813064.1
Q8A068  
 BVU_0121   Bacteroides vulgatus ATCC 8482 ABR37851.1 A6KWN7  
 BVU_0124   Bacteroides vulgatus ATCC 8482 ABR37854.1 A6KWP0  
 BVU_0153   Bacteroides vulgatus ATCC 8482 ABR37881.1 A6KWR7  
 BVU_0177   Bacteroides vulgatus ATCC 8482 ABR37905.1 A6KWU1  
 BVU_0183   Bacteroides vulgatus ATCC 8482 ABR37911.1 A6KWU7  
 BVU_0186   Bacteroides vulgatus ATCC 8482 ABR37914.1 A6KWV0  
 BVU_1747   Bacteroides vulgatus ATCC 8482 ABR39423.1 A6L159  
 BVU_1767   Bacteroides vulgatus ATCC 8482 ABR39443.1 A6L179  
 BVU_1769   Bacteroides vulgatus ATCC 8482 ABR39445.1 A6L181  
 BVU_1985   Bacteroides vulgatus ATCC 8482 ABR39657.1 A6L1U3  
 BVU_2163   Bacteroides vulgatus ATCC 8482 ABR39824.1 A6L2B0  
 BVU_2168 (fragment)   Bacteroides vulgatus ATCC 8482 ABR39829.1 A6L2B5  
 BVU_2732   Bacteroides vulgatus ATCC 8482 ABR40382.1 A6L3W8  
 BvMPK_0293   Bacteroides vulgatus mpk ALK82932.1    
 BvMPK_3849   Bacteroides vulgatus mpk ALK86407.1    
 BvMPK_2427   Bacteroides vulgatus mpk ALK85022.1    
 BvMPK_0613   Bacteroides vulgatus mpk ALK83234.1    
 BvMPK_3888   Bacteroides vulgatus mpk ALK86446.1    
 BvMPK_0271   Bacteroides vulgatus mpk ALK82910.1    
 BvMPK_2411 (fragment)   Bacteroides vulgatus mpk ALK85006.1    
 BvMPK_3880 (fragment)   Bacteroides vulgatus mpk ALK86438.1    
 BvMPK_1216   Bacteroides vulgatus mpk ALK83830.1    
 BvMPK_0273   Bacteroides vulgatus mpk ALK82912.1    
 BvMPK_3886 (fragment)   Bacteroides vulgatus mpk ALK86444.1    
 VIC01_01045 (Pehx_2)   Bacteroides vulgatus VIC01 QEW35553.1    
 VIC01_01120 (fragment)   Bacteroides vulgatus VIC01 QEW35626.1    
 VIC01_01048 (Pehx_3)   Bacteroides vulgatus VIC01 QEW35556.1    
 VIC01_03809 (PehA)   Bacteroides vulgatus VIC01 QEW38187.1    
 VIC01_03807 (Pgl_5)   Bacteroides vulgatus VIC01 QEW38185.1    
 VIC01_01054 (Pgl_2) (fragment)   Bacteroides vulgatus VIC01 QEW35562.1    
 VIC01_03601 (Pehx_5)   Bacteroides vulgatus VIC01 QEW37987.1    
 VIC01_00414 (Pehx_1)   Bacteroides vulgatus VIC01 QEW34965.1    
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Last update: 2019-11-09 © Copyright 1998-2019
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