Glycoside Hydrolase Family 28

Activities in FamilyXylogalacturonan hydrolase (EC 3.2.1.-);
Endo-polygalacturonase (EC 3.2.1.15);
Rhamnogalacturonase (EC 3.2.1.171);
Rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173);
Galacturonan α-1,4-galacturonidase (EC 3.2.1.67);
Exo-poly-α-digalacturonosidase (EC 3.2.1.82);
Mechanism Inverting a
ClanGH-N
3D Structure Statusparallel β-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (18868); Uniprot accession (179); PDB accession (25); 3D entries (20); cryst (3)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | ... | 101 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 Aaci_2457   Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 ACV59463.1    
 TC41_2748   Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1 AEJ44642.1    
 JZ786_10145   Alicyclobacillus ferrooxydans S30H14 QSO49240.1    
 JZ786_10110   Alicyclobacillus ferrooxydans S30H14 QSO49234.1    
 polygalacturonase, partial (fragment)   Alicyclobacillus sp. CGMCC 3147 AFO38194.1    
 GI364_18700   Alicyclobacillus sp. SO9 QQE77922.1    
 CE91St15_21400   Alistipes finegoldii CE91-St15 BDF64654.1    
 CE91St15_21390   Alistipes finegoldii CE91-St15 BDF64653.1    
 Alfi_1087   Alistipes finegoldii DSM 17242 AFL77441.1    
 Alfi_1088   Alistipes finegoldii DSM 17242 AFL77442.1    
 AI2BBH_05140   Alistipes indistinctus 2BBH45 BCG53468.1    
 AI2BBH_05070   Alistipes indistinctus 2BBH45 BCG53461.1    
 AI2BBH_05120   Alistipes indistinctus 2BBH45 BCG53466.1    
 AI2BBH_05090 (fragment)   Alistipes indistinctus 2BBH45 BCG53463.1    
 AI2BBH_05080   Alistipes indistinctus 2BBH45 BCG53462.1    
 NQ495_09615   Alistipes indistinctus YIT 12060 UWN58974.1    
 NQ495_09620   Alistipes indistinctus YIT 12060 UWN58975.1    
 NQ495_09610 (fragment)   Alistipes indistinctus YIT 12060 UWN58973.1    
 NQ495_09595   Alistipes indistinctus YIT 12060 UWN60567.1    
 NQ495_09585   Alistipes indistinctus YIT 12060 UWN58969.1    
 CE91St18_21700   Alistipes onderdonkii CE91-St18 BDE91438.1    
 NQ559_11065   Alistipes onderdonkii DSM 19147 UWN61174.1    
 A3BBH6_22530   Alistipes onderdonkii subsp. vulgaris 3BBH6 BBL02017.1    
 NQ519_02650   Alistipes senegalensis JC50 UWN65758.1    
 NQ519_03520   Alistipes senegalensis JC50 UWN65922.1    
 NQ519_00760   Alistipes senegalensis JC50 UWN65396.1    
 NQ519_03550   Alistipes senegalensis JC50 UWN65928.1    
 NQ519_03525   Alistipes senegalensis JC50 UWN65923.1    
 NQ519_05175   Alistipes senegalensis JC50 UWN66227.1    
 NQ519_05180   Alistipes senegalensis JC50 UWN66228.1    
 AL1_11740   Alistipes shahii WAL 8301 CBK63669.1    
 AL1_13900   Alistipes shahii WAL 8301 CBK63844.1    
 NQ492_12400   Alistipes shahii WAL 8301 UWN67598.1    
 NQ492_00965   Alistipes shahii WAL 8301 UWN68481.1    
 MM271_17790   Alkalihalobacillus sp. LMS39 UOE93048.1    
 Amet_0899   Alkaliphilus metalliredigens QYMF ABR47121.1    
 CDL62_02045   Alkalitalea saponilacus DSM 24412 ASB48011.1    
 CDL62_02080   Alkalitalea saponilacus DSM 24412 ASB51018.1    
 CDL62_02290   Alkalitalea saponilacus DSM 24412 ASB51022.1    
 CDL62_11380   Alkalitalea saponilacus DSM 24412 ASB51139.1    
 H7849_01410   Alloacidobacterium dinghuense 4Y35 QNI32703.1    
 Avi_1489 (PeH)   Allorhizobium ampelinum S4 ACM36064.1    
 Avi_5759   Allorhizobium ampelinum S4 ACM38832.1    
 CEW88_05355   Alloyangia pacifica YSBP01 AWI83141.1    
 BN85405200   Alteracholeplasma palmae J233 CCV64097.1    
 BN85409040   Alteracholeplasma palmae J233 CCV64481.1    
 BN85413840   Alteracholeplasma palmae J233 CCV64961.1    
 LBX01_05210   Altererythrobacter sp. N1 UBS34020.1    
 LBX01_05230   Altererythrobacter sp. N1 UBS34024.1    
 EP12_12350   Alteromonas australica DE170 AJP44341.1    
 EP13_11670   Alteromonas australica H 17 AIF99288.1    
 ALT831_02431   Alteromonas macleodii CAI2390460.1    
 ALT831_02924   Alteromonas macleodii CAI2390938.1    
 ALTBGP14_02924   Alteromonas macleodii isolate BGP14 CAI3964498.1    
 EZ55_02443   Alteromonas macleodii isolate EZ55 CAI3962015.1    
 EZ55_02934   Alteromonas macleodii isolate EZ55 CAI3964511.1    
 ALTBGP14_02431   Alteromonas macleodii isolate BGP14 CAI3961978.1    
 ALTBGP6_02431   Alteromonas macleodii isolate BGP6 CAI3961986.1    
 ALTBGP6_02925   Alteromonas macleodii isolate BGP6 CAI3964502.1    
 ALTBGP9_02841   Alteromonas macleodii isolate BGP9 CAI3964121.1    
 ALTBGP9_02361   Alteromonas macleodii isolate BGP9 CAI3961451.1    
 MIT1002_02448   Alteromonas macleodii isolate MIT1002 CAI3962109.1    
 MIT1002_02945   Alteromonas macleodii isolate MIT1002 CAI3964615.1    
 MASE_13670   Alteromonas macleodii ATCC 27126 AFS38240.1    
 ACZ81_14290   Alteromonas macleodii HOT1A3 AMN12642.1    
 ACZ81_11905   Alteromonas macleodii HOT1A3 AMN12225.1    
 WE348_14175   Alteromonas macleodii KD01 WXJ68538.1    
 WE348_11780   Alteromonas macleodii KD01 WXJ71557.1    
 NFG60_18070   Alteromonas macleodii QZ9-9 USI27590.1    
 NFG60_15475   Alteromonas macleodii QZ9-9 USI30172.1    
 AMBAS45_14170   Alteromonas macleodii str. Balearic Sea AD45 AFT96297.1    
 AMBAS45_11955   Alteromonas macleodii str. Balearic Sea AD45 AFT95856.1    
 AMBLS11_13575   Alteromonas macleodii str. Black Sea 11 AFT79286.1    
 AMBLS11_11190   Alteromonas macleodii str. Black Sea 11 AFT78815.1    
 AMEC673_14000   Alteromonas macleodii str. English Channel 673 AFT75482.1    
 AMEC673_11695   Alteromonas macleodii str. English Channel 673 AFT75029.1    
 TE101_14300   Alteromonas macleodii Te101 AUI83382.1    
 TE101_11925   Alteromonas macleodii Te101 AUI82958.1    
 I633_12770   Alteromonas mediterranea 615 AGP78430.1    
 FJN15_10905   Alteromonas mediterranea AltCH17 QGX62240.1    
 BM523_10975   Alteromonas mediterranea AR43 APD94485.1    
 BM524_10995   Alteromonas mediterranea CP48 APD90280.1    
 BM525_11015   Alteromonas mediterranea CP49 APD98117.1    
 FJN14_10600   Alteromonas mediterranea PT15 QDG38875.1    
 BM526_11140   Alteromonas mediterranea RG65 APE02360.1    
 I607_11655   Alteromonas mediterranea U4 AGP86116.1    
 I876_12025   Alteromonas mediterranea U7 AGP90254.1    
 I634_11880   Alteromonas mediterranea U8 AGP94075.1    
 CA267_004880   Alteromonas pelagimontana 5.12 QJR80156.1    
 CA267_010125   Alteromonas pelagimontana 5.12 QJR81109.1    
 IUA53_07500   Alteromonas sp. B31-7 QPL51945.1    
 R1T43_08760   Alteromonas sp. CI.11.F.A3 WOI39097.1    
 AltI4_42170   Alteromonas sp. I4 BBO29829.1    
 AltI4_29740   Alteromonas sp. I4 BBO28586.1    
 AV939_11870   Alteromonas sp. Mac1 AMJ87203.1    
 AV940_11635   Alteromonas sp. Mac2 AMJ91065.1    
 DS731_01775   Alteromonas sp. RKMC-009 AYA62835.1    
 DS731_08210   Alteromonas sp. RKMC-009 AYA63985.1    
 AOR13_1124   Alteromonas stellipolaris LMG 21856 ALM90167.1    
 AVL57_13030   Alteromonas stellipolaris LMG 21861 AMJ74803.1    
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