Glycoside Hydrolase Family 28

Activities in Familypolygalacturonase (EC 3.2.1.15); α-L-rhamnosidase (EC 3.2.1.40); exo-polygalacturonase (EC 3.2.1.67); exo-polygalacturonosidase (EC 3.2.1.82); rhamnogalacturonase (EC 3.2.1.171); rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173); endo-xylogalacturonan hydrolase (EC 3.2.1.-)
Mechanism Inverting
ClanGH-N
3D Structure Status( β )-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (6609); Uniprot accession (1123); PDB accession (18); 3D entries (17); cryst (3)
All (4868) Archaea (11) Bacteria (2233) Eukaryota (2618) unclassified (6) Structure (17 - 3 cryst) Characterized (213)
| 1 | ... | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | ... | 23 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 D770_01125   Flammeovirgaceae bacterium 311 AHM58499.1    
 D770_01150   Flammeovirgaceae bacterium 311 AHM58504.1    
 SY85_14200   Flavisolibacter tropicus LCS9 ANE51485.1    
 SY85_03575   Flavisolibacter tropicus LCS9 ANE49712.1    
 FIC_01881   Flavobacteriaceae bacterium 3519-10 ACU08324.1 C6X1L1  
 FBFL15_2667   Flavobacterium branchiophilum FL-15 CCB70659.1    
 BIW12_04730   Flavobacterium commune PK15 AOZ98792.1    
 BIW12_12180   Flavobacterium commune PK15 APA00997.1    
 BIW12_06220   Flavobacterium commune PK15 AOZ99062.1    
 BIW12_07130   Flavobacterium commune PK15 AOZ99232.1    
 BIW12_10195   Flavobacterium commune PK15 AOZ99779.1    
 BIW12_10165   Flavobacterium commune PK15 AOZ99775.1    
 BIW12_01710   Flavobacterium commune PK15 AOZ98256.1    
 BIW12_11685   Flavobacterium commune PK15 APA00987.1    
 BIW12_14140   Flavobacterium commune PK15 APA01032.1    
 BIW12_13240   Flavobacterium commune PK15 APA00311.1    
 BIW12_13175   Flavobacterium commune PK15 APA00298.1    
 BIW12_04645   Flavobacterium commune PK15 AOZ98780.1    
 BIW12_00145   Flavobacterium commune PK15 AOZ97978.1    
 BIW12_10065   Flavobacterium commune PK15 APA00953.1    
 EM308_09750   Flavobacterium gilvum EM1308 AOW09765.1    
 EM308_14815   Flavobacterium gilvum EM1308 AOW10659.1    
 EM308_15800   Flavobacterium gilvum EM1308 AOW10833.1    
 EM308_15720   Flavobacterium gilvum EM1308 AOW10820.1    
 EM308_09725   Flavobacterium gilvum EM1308 AOW09761.1    
 EM308_01395   Flavobacterium gilvum EM1308 AOW08273.1    
 EM308_07455   Flavobacterium gilvum EM1308 AOW09354.1    
 EM308_07445   Flavobacterium gilvum EM1308 AOW09352.1    
 BB050_03319 (Pgl_4)   Flavobacterium johnsoniae GSE09 AOC96408.1    
 BB050_03433 (Pehx_2)   Flavobacterium johnsoniae GSE09 AOC96522.1    
 BB050_03434 (Pehx_3)   Flavobacterium johnsoniae GSE09 AOC96523.1    
 BB050_03228 (Pehx_1)   Flavobacterium johnsoniae GSE09 AOC96317.1    
 BB050_03238 (Pgl_3)   Flavobacterium johnsoniae GSE09 AOC96327.1    
 BB050_03342 (Pgl_5)   Flavobacterium johnsoniae GSE09 AOC96431.1    
 Fjoh_3114   Flavobacterium johnsoniae UW101 ABQ06131.1 A5FF89  
 Fjoh_3115   Flavobacterium johnsoniae UW101 ABQ06132.1 A5FF90  
 Fjoh_4088   Flavobacterium johnsoniae UW101 ABQ07096.1 A5FCH6  
 Fjoh_4115   Flavobacterium johnsoniae UW101 ABQ07123.1 A5FCE9  
 Fjoh_4228   Flavobacterium johnsoniae UW101 ABQ07236.1 A5FC28  
 Fjoh_4247   Flavobacterium johnsoniae UW101 ABQ07255.1 A5FC11  
 Fjoh_4256   Flavobacterium johnsoniae UW101 ABQ07264.1 A5FC09  
 ALW18_05710   Flavobacterium psychrophilum Z1 AOE52059.1    
 AMR72_05715   Flavobacterium psychrophilum Z2 ALM48440.1    
 BN863_21300   Formosa agariphila KMM 3901 CDF79842.1    
 BN863_21330   Formosa agariphila KMM 3901 CDF79845.1    
 Fraau_0270   Frateuria aurantia DSM 6220 AFC84763.1    
 Fraau_1110   Frateuria aurantia DSM 6220 AFC85570.1    
 NIES3275_23180   Fremyella diplosiphon NIES-3275 BAY90306.1    
 J421_0373   Gemmatirosa kalamazoonesis KBS708 AHG87910.1    
 J421_5618   Gemmatirosa kalamazoonesis KBS708 AHG93153.1    
 J421_5619   Gemmatirosa kalamazoonesis KBS708 AHG93154.1    
 J421_5649   Gemmatirosa kalamazoonesis KBS708 AHG93184.1    
 J421_0350   Gemmatirosa kalamazoonesis KBS708 AHG87887.1    
 J421_0372   Gemmatirosa kalamazoonesis KBS708 AHG87909.1    
 AWC35_04705   Gibbsiella quercinecans FRB97 ATA18701.1    
 GAPWK_2257   Gilliamella apicola wkB1 AHN26830.1    
 GAPWK_0302   Gilliamella apicola wkB1 AHN24879.1    
 A0U94_14160   Gluconobacter albidus TMW2.1191 AQS92328.1    
 B932_3724   Gluconobacter oxydans H24 AFW03263.1    
 GRFL_2178   Gramella flava JLT2011 APU68902.1    
 GRFL_2174   Gramella flava JLT2011 APU68898.1    
 GRFL_1437   Gramella flava JLT2011 APU68161.1    
 GRFL_1446   Gramella flava JLT2011 APU68170.1    
 SAMN04488553_2774   Gramella sp. MAR_2010_147 SDS65678.1    
 SAMN04488553_2783   Gramella sp. MAR_2010_147 SDS66052.1    
 SAMN04488553_2741   Gramella sp. MAR_2010_147 SDS64335.1    
 AciX8_0078   Granulicella mallensis MP5ACTX8 AEU34436.1    
 AciX8_2328   Granulicella mallensis MP5ACTX8 AEU36645.1    
 AciX8_2331   Granulicella mallensis MP5ACTX8 AEU36648.1    
 AciX8_3792   Granulicella mallensis MP5ACTX8 AEU38076.1    
 AciX8_4125   Granulicella mallensis MP5ACTX8 AEU38406.1    
 AciX8_4151   Granulicella mallensis MP5ACTX8 AEU38432.1    
 AciX8_1977   Granulicella mallensis MP5ACTX8 AEU36307.1    
 AciX8_3429   Granulicella mallensis MP5ACTX8 AEU37727.1    
 AciX9_0451   Granulicella tundricola MP5ACTX9 ADW67523.1    
 AciX9_0528   Granulicella tundricola MP5ACTX9 ADW67600.1    
 AciX9_1126   Granulicella tundricola MP5ACTX9 ADW68189.1    
 AciX9_1211   Granulicella tundricola MP5ACTX9 ADW68274.1    
 AciX9_1745   Granulicella tundricola MP5ACTX9 ADW68793.1    
 AciX9_3277   Granulicella tundricola MP5ACTX9 ADW70288.1    
 AciX9_3992   Granulicella tundricola MP5ACTX9 ADW71266.1    
 AciX9_4016   Granulicella tundricola MP5ACTX9 ADW70812.1    
 AciX9_3837   Granulicella tundricola MP5ACTX9 ADW71123.1    
 AciX9_3991 (fragment)   Granulicella tundricola MP5ACTX9 ADW71265.1    
 YC6258_02742 (fragment)   Gynuella sunshinyii YC6258 AJQ94780.1    
 YC6258_03209   Gynuella sunshinyii YC6258 AJQ95245.1    
 AL518_00410   Hafnia alvei FDAARGOS_158 AMH16650.1    
 HCH_03104   Hahella chejuensis KCTC 2396 ABC29870.1 Q2SHK4  
 Halhy_3139   Haliscomenobacter hydrossis DSM 1100 AEE51001.1    
 Halhy_4385   Haliscomenobacter hydrossis DSM 1100 AEE52229.1    
 Halhy_6803   Haliscomenobacter hydrossis DSM 1100 AEE54616.1    
 Hrubri_3502   Herbaspirillum rubrisubalbicans M1 ALU90659.1    
 Hbal_2762   Hirschia baltica ATCC 49814 ATCC 59814 ACT60435.1 C6XQD6  
 Hbal_2763   Hirschia baltica ATCC 49814 ATCC 59814 ACT60436.1 C6XQD7  
 AUC43_09265   Hymenobacter sedentarius DG5B ALW85269.1    
 AUC43_01985   Hymenobacter sedentarius DG5B ALW83974.1    
 A0257_09950   Hymenobacter sp. PAMC 26554 AMR27387.1    
 A0257_06185   Hymenobacter sp. PAMC 26554 AMR29643.1    
 A0257_06915   Hymenobacter sp. PAMC 26554 AMR29654.1    
 A0257_01755   Hymenobacter sp. PAMC 26554 AMR25945.1    
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