Glycoside Hydrolase Family 28

Activities in Familypolygalacturonase (EC 3.2.1.15); α-L-rhamnosidase (EC 3.2.1.40); exo-polygalacturonase (EC 3.2.1.67); exo-polygalacturonosidase (EC 3.2.1.82); rhamnogalacturonase (EC 3.2.1.171); rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173); xylogalacturonan hydrolase (EC 3.2.1.-)
Mechanism Inverting
ClanGH-N
3D Structure Status( β )-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (9090); Uniprot accession (1123); PDB accession (18); 3D entries (17); cryst (3)
All (7267) Archaea (11) Bacteria (3719) Eukaryota (3530) Viruses (1) unclassified (6) Structure (17 - 3 cryst) Characterized (218)
| 1 | ... | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | ... | 38 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 LH89_06495   Cedecea neteri ND14b AIR68876.1    
 IMCC12053_3089   Celeribacter marinus IMCC 12053 ALI57036.1    
 Celal_2476   Cellulophaga algicola DSM 14237 ADV49764.1    
 Celal_2479   Cellulophaga algicola DSM 14237 ADV49767.1    
 M666_09660   Cellulophaga baltica 18 AIZ41826.1    
 M666_09675   Cellulophaga baltica 18 AIZ41828.1    
 M667_09745   Cellulophaga baltica NN016038 AIY13475.1    
 M667_09730   Cellulophaga baltica NN016038 AIY15326.1    
 A5M85_02260   Cellulophaga lytica DAU203 APU09152.1    
 Celly_0434   Cellulophaga lytica DSM 7489 ADY28269.1    
 IX49_01870   Cellulophaga lytica HI1 AIM59338.1    
 Clole_1226   Cellulosilyticum lentocellum DSM 5427 ADZ82954.1    
 ORF   Cellulosilyticum ruminicola CGMCC 1.5065 ACZ98650.1 D2KFP8  
 EKH84_08820   Cellulosilyticum sp. WCF-2 QEH68470.1    
 EKH84_06615   Cellulosilyticum sp. WCF-2 QEH68079.1    
 FY115_00845   Cellvibrio japonicus ADPT1-KOJIBIOSE QEI21171.1    
 FY116_00845   Cellvibrio japonicus ADPT2-NIGEROSE QEI17596.1    
 FY117_00845   Cellvibrio japonicus ADPT3-ISOMALTOSE QEI14022.1    
 CJA_0172 (Pga28A)   Cellvibrio japonicus Ueda107 ACE86080.1 B3PGB7  
 D0C16_18325   Cellvibrio sp. KY-GH-1 QEY19107.1    
 D0B88_04825   Cellvibrio sp. KY-YJ-3 QEY11651.1    
 D0B88_00045   Cellvibrio sp. KY-YJ-3 QEY10785.1    
 D0B88_10295   Cellvibrio sp. KY-YJ-3 QEY12607.1    
 CBR65_11470   Cellvibrio sp. PSBB006 ARU27996.1    
 CBR65_17330   Cellvibrio sp. PSBB006 ARU29059.1    
 B0D95_13025   Cellvibrio sp. PSBB023 AQT62443.1    
 B0D95_19360   Cellvibrio sp. PSBB023 AQT62542.1    
 Z042_11045   Chania multitudinisentens RB-25 AHG20102.1
AHG20102.2
   
 Z042_19390   Chania multitudinisentens RB-25 AHG21527.1    
 Z042_26490   Chania multitudinisentens RB-25 AJW29005.1    
 Cpin_5506   Chitinophaga pinensis DSM 2588 ACU62935.1 C7PV26  
 Cpin_5903   Chitinophaga pinensis DSM 2588 ACU63321.1 C7PEB2  
 CK934_01170   Chitinophaga sp. MD30 ASZ09680.1    
 CK934_01175   Chitinophaga sp. MD30 ASZ09681.1    
 DLD77_09855   Chitinophaga sp. T22 AWO01979.1    
 EB354_16845   Chryseobacterium balustinum KC_1863 AZB30781.1    
 EB354_10250   Chryseobacterium balustinum KC_1863 AZB29605.1    
 EB354_10355   Chryseobacterium balustinum KC_1863 AZB29623.1    
 EG345_05170   Chryseobacterium carnipullorum F9942 AZA64156.1    
 EG346_14235   Chryseobacterium carnipullorum G0188 AZA49262.1    
 A0O34_05050   Chryseobacterium glaciei IHBB 10212 ANF49936.1    
 A0O34_16000   Chryseobacterium glaciei IHBB 10212 ANF53202.1    
 A0O34_16090   Chryseobacterium glaciei IHBB 10212 ANF51938.1    
 EG358_10235   Chryseobacterium indoltheticum ATCC 27950 AZA74106.1    
 EG358_04635   Chryseobacterium indoltheticum ATCC 27950 AZA73098.1    
 EG358_10140   Chryseobacterium indoltheticum ATCC 27950 AZA74088.1    
 EG340_04815   Chryseobacterium indoltheticum G0211 AZA60399.1    
 EG340_09465   Chryseobacterium indoltheticum G0211 AZA61245.1    
 EG340_04910   Chryseobacterium indoltheticum G0211 AZA60417.1    
 EG349_04550   Chryseobacterium shandongense G0207 AZA88905.1    
 EG349_04645   Chryseobacterium shandongense G0207 AZA86121.1    
 EG349_16305   Chryseobacterium shandongense G0207 AZA88236.1    
 EG350_12015   Chryseobacterium shandongense G0239 AZA59443.1    
 EG350_03965   Chryseobacterium shandongense G0239 AZA56395.1    
 EG350_12110   Chryseobacterium shandongense G0239 AZA57881.1    
 EG353_02670   Chryseobacterium shandongense H5143 AZA94532.1    
 EG353_15095   Chryseobacterium shandongense H5143 AZA96798.1    
 EG353_02575   Chryseobacterium shandongense H5143 AZA97846.1    
 EAG08_18955   Chryseobacterium sp. 3008163 AYN02097.1    
 EAG08_06810   Chryseobacterium sp. 3008163 AYN00077.1    
 EAG08_18840   Chryseobacterium sp. 3008163 AYN02077.1    
 EG348_00110   Chryseobacterium sp. G0201 AZA51516.1    
 EG348_10445   Chryseobacterium sp. G0201 AZA53397.1    
 EG348_00205   Chryseobacterium sp. G0201 AZA51534.1    
 ATE47_05900   Chryseobacterium sp. IHB B 17019 ALR30083.1    
 ATE47_05980   Chryseobacterium sp. IHB B 17019 ALR32508.1    
 ATE47_05805   Chryseobacterium sp. IHB B 17019 ALR30065.1    
 CCALI_02545   Chthonomonas calidirosea T49 CCW36339.1    
 AL479_13075   Citrobacter amalonaticus FDAARGOS_122 AMG93353.1    
 F384_00700   Citrobacter amalonaticus Y19 AKE57765.1    
 CI104_05095   Citrobacter farmeri AUSMDU00008141 AST78508.1    
 WM46_14050   Citrobacter freundii complex sp. CFNIH2 AUO65784.1    
 GBC03_25160   Citrobacter sp. NMI7904_11 QFS73260.1    
 AES38_02890   Clavibacter michiganensis subsp. capsici PF008 ALD14064.1    
 BEH62_14510   Clavibacter michiganensis subsp. insidiosus ATCC 10253 AWG02804.1    
 VO01_14785   Clavibacter michiganensis subsp. insidiosus R1-1 AJW80211.1    
 BEH61_14430   Clavibacter michiganensis subsp. insidiosus R1-3 AWF99701.1    
 CMM_2871   Clavibacter michiganensis subsp. michiganensis NCPPB 382 CAN02957.1 A5CV18  
 EFE39_14835   Clavibacter michiganensis subsp. michiganensis UF1 QGV76405.1    
 EGX35_14095   Clavibacter michiganensis subsp. nebraskensis 61-1 QGV73445.1    
 EGX37_14095   Clavibacter michiganensis subsp. nebraskensis 7580 QGV70654.1    
 EGX36_14140   Clavibacter michiganensis subsp. nebraskensis HF4 QGV67854.1    
 CMN_02839 (PgaA)   Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 CCE76765.1    
 CMS2178   Clavibacter michiganensis subsp. sepedonicus ATCC33113 CAQ02272.1 B0RFQ2  
 CAC0355   Clostridium acetobutylicum ATCC 824 AAK78335.1
NP_346995.1
Q97M45  
 CAC3684   Clostridium acetobutylicum ATCC 824 AAK81605.1
NP_350265.1
Q97D05  
 SMB_G3725 (PehX)   Clostridium acetobutylicum DSM 1731 AEI34072.1    
 SMB_G0363 (PgL)   Clostridium acetobutylicum DSM 1731 AEI33761.1    
 CEA_G0365   Clostridium acetobutylicum EA 2018 ADZ19404.1    
 CEA_G3691   Clostridium acetobutylicum EA 2018 ADZ22728.1    
 DK921_11535   Clostridium acetobutylicum LJ4 AWV80720.1    
 DK921_08130   Clostridium acetobutylicum LJ4 AWV80060.1    
 CAETHG_0930   Clostridium autoethanogenum DSM 10061 AGY75155.1
ALU35327.1
   
 CGC65_28945   [Clostridium] bolteae ATCC BAA-613 ASN98356.1    
 FBD76_15410   Clostridium butyricum 4-1 QCJ07683.1    
 NPD4_2318   Clostridium butyricum CDC_51208 APF22263.1    
 EBL75_12200   Clostridium butyricum CFSA3987 QGH22295.1    
 EBQ27_12205   Clostridium butyricum CFSA3989 QGH26334.1    
 ATD26_10365   Clostridium butyricum JKY6D1 ALS17253.1    
 ATN24_11420   Clostridium butyricum KNU-L09 ALP90718.1    
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