Glycoside Hydrolase Family 28

Activities in Familypolygalacturonase (EC 3.2.1.15); α-L-rhamnosidase (EC 3.2.1.40); exo-polygalacturonase (EC 3.2.1.67); exo-polygalacturonosidase (EC 3.2.1.82); rhamnogalacturonase (EC 3.2.1.171); rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173); xylogalacturonan hydrolase (EC 3.2.1.-)
Mechanism Inverting
ClanGH-N
3D Structure Status( β )-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (8667); Uniprot accession (1123); PDB accession (18); 3D entries (17); cryst (3)
All (6842) Archaea (11) Bacteria (3480) Eukaryota (3344) Viruses (1) unclassified (6) Structure (17 - 3 cryst) Characterized (219)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | ... | 35 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 BkAM31D_06485 (Pgl_1)   Bacillus krulwichiae AM31D ARK29533.1    
 BkAM31D_06535 (Pgl_2)   Bacillus krulwichiae AM31D ARK29543.1    
 Sequence 6 from patent US 6429000   Bacillus licheniformis AAN26178.1    
 BLDA23_19030   Bacillus licheniformis 0DA23-1 AXF90251.1    
 BL14DL4_01760   Bacillus licheniformis 14ADL4 AVI46989.1    
 EJ992_17600   Bacillus licheniformis ATCC 14580 QCY00721.1    
 CPQ91_18085   Bacillus licheniformis ATCC 9789 ATI77631.1    
 BL1202_03814   Bacillus licheniformis BL1202 AOP16735.1    
 CD200_17640   Bacillus licheniformis CBA7132 AWV42153.1    
 BLCSL_18200   Bacillus licheniformis CSL2 QDF80660.1    
 BLi03511 or BL00713   Bacillus licheniformis DSM 13 = ATCC 14580 AAU42338.1
AAU24968.1
ACP63057.1
Q65F26  
 AB684_17840   Bacillus licheniformis HRBL-15TDI7 AMR11935.1    
 C1T27_17950   Bacillus licheniformis MBGJa67 AUZ32122.1    
 EYQ98_18525   Bacillus licheniformis MCC 2514 QBR21558.1    
 NCTC10341_03701 (PehX)   Bacillus licheniformis NCTC10341 VEH81388.1    
 NCTC8721_03779 (PehX)   Bacillus licheniformis NCTC8721 VEB20687.1    
 CXG95_02690   Bacillus licheniformis PB3 AZN78067.1    
 B37_03162 (PehX)   Bacillus licheniformis SCCB 37 ARC75187.1    
 B14_00960 (PehX)   Bacillus licheniformis SCDB 14 ARC63985.1    
 B34_02137 (PehX)   Bacillus licheniformis SCDB 34 ARC69553.1    
 BaDB11_01695 (PehX)   Bacillus licheniformis SCK B11 ARC60337.1    
 S100141_03044   Bacillus licheniformis SRCM100141 ARW44339.1    
 EQY74_18990   Bacillus licheniformis SRCM103529 QAT54844.1    
 ETA57_18790   Bacillus licheniformis SRCM103583 QAW30486.1    
 ETK49_18135   Bacillus licheniformis SRCM103608 QAW39073.1    
 EQJ69_17745   Bacillus licheniformis SRCM103914 QAS17646.1    
 glycoside hydrolase (Gh28A)   Bacillus licheniformis SVD1 BAL45524.1    
 C7M53_18640   Bacillus licheniformis TAB7 AYC53231.1    
 D9Y32_10700   Bacillus licheniformis TCCC 11148 QDL77865.1    
 MUY_003641   Bacillus licheniformis WX-02 AKQ74773.1    
 D0440_16575   Bacillus megaterium Mn1-4 QDZ82824.1    
 AS52_01921 (PehX)   Bacillus megaterium Q3 AKP76886.1    
 C0569_20815   Bacillus megaterium STB1 AUO14598.1    
 BMWSH_3356   Bacillus megaterium WSH-002 AEN90238.1    
 C2I28_17455   Bacillus megaterium YC4-R4 AWD68486.1    
 FLQ07_01985   Bacillus paralicheniformis A4-3 QEO04461.1    
 BaLi_c35760   Bacillus paralicheniformis ATCC 9945a AGN37891.1    
 SC10_B2orf05382   Bacillus paralicheniformis BL-09 AJO19939.1    
 D5285_18775   Bacillus paralicheniformis CBMAI 1303 AYQ17958.1    
 BLMD_17820   Bacillus paralicheniformis MDJK30 ARA87184.1    
 C5695_16580   Bacillus pumilus 145 AVM25362.1    
 C5Y82_15425   Bacillus pumilus 150a AVI42322.1    
 VP59_14420   Bacillus pumilus C4 ANT57957.1    
 BS467_08505   Bacillus pumilus GLB197 APP15766.1    
 ID12_01275   Bacillus pumilus GR-8 AKU30129.1    
 ASM07_14475   Bacillus pumilus ku-bf1 AMB91055.1    
 BW16_16085   Bacillus pumilus MTCC B6033 AHL72818.1    
 SAMEA4076707_03348 (PehX)   Bacillus pumilus NCTC10337 SNV13748.1    
 AKO65_08015   Bacillus pumilus NJ-M2 ALM27962.1    
 AKO66_04330   Bacillus pumilus NJ-V ANY95978.1    
 AMR71_04325   Bacillus pumilus NJ-V2 ALM44502.1    
 BEN31_01180   Bacillus pumilus PDSLzg-1 AOC55490.1    
 BPUM_2983   Bacillus pumilus SAFR-032 ABV63637.1 A8FHC0  
 UP15_15755   Bacillus pumilus SH-B11 AMM90351.1    
 UP12_15590   Bacillus pumilus SH-B9 AMM98684.1    
 BTUAT1_30590   Bacillus pumilus TUAT1 BAT50193.1    
 VT48_15405   Bacillus pumilus W3 AKC67356.1    
 DKE43_11385   Bacillus pumilus ZB201701 AZV53668.1    
 BRL64_15580   Bacillus safensis BRM1 ARD57511.1    
 RS87_15600   Bacillus safensis FO-36b AWI38151.1    
 BSL056_16710   Bacillus safensis KCTC 12796BP APJ12493.1    
 FX981_02294 (PehX)   Bacillus safensis PgKB20 QEK64051.1    
 CS953_03315   Bacillus safensis sami AYJ88785.1    
 BSA145_04835   Bacillus safensis U14-5 APT45308.1    
 BSA171_04210   Bacillus safensis U17-1 APT52836.1    
 BSA41_13500   Bacillus safensis U41 APT50888.1    
 S101395_04240   Bacillus sonorensis SRCM101395 ASB90742.1    
 CJO35_17440   Bacillus sp. 1s-1 ASV16837.1    
 BSZ43_17325   Bacillus sp. H15-1 APJ28402.1    
 exo-polygalacturonosidase (Peh358) 3.2.1.82 Bacillus sp. KSM-P358 / P-358 BAB85762.1 Q8RR74  
 QR42_15055   Bacillus sp. WP8 AIZ61496.1    
 BK049_12125   Bacillus xiamenensis VV3 AOZ89370.1    
 CGC64_07245   Bacteroides caccae ATCC 43185 ASM65773.1    
 CGC64_17395   Bacteroides caccae ATCC 43185 ASW16392.1    
 CGC64_17405   Bacteroides caccae ATCC 43185 ASW16403.1    
 A4V03_02495   Bacteroides caecimuris I48 ANU56571.1    
 A4V03_02250   Bacteroides caecimuris I48 ANU56533.1    
 A4V03_14180   Bacteroides caecimuris I48 ANU58578.1
ANU58578.2
   
 A4V03_10600   Bacteroides caecimuris I48 ANU59785.1    
 A4V03_02260   Bacteroides caecimuris I48 ANU56535.1    
 BcellWH2_02310 (Pgl_4)   Bacteroides cellulosilyticus WH2 ALJ59550.1    
 BcellWH2_03153 (Pehx_7)   Bacteroides cellulosilyticus WH2 ALJ60390.1    
 BcellWH2_01210 (Pehx_1)   Bacteroides cellulosilyticus WH2 ALJ58472.1    
 BcellWH2_04838 (CatD)   Bacteroides cellulosilyticus WH2 ALJ62047.1    
 BcellWH2_03515 (Pgl_7)   Bacteroides cellulosilyticus WH2 ALJ60738.1    
 BcellWH2_02277 (Pehx_4)   Bacteroides cellulosilyticus WH2 ALJ59517.1    
 BcellWH2_04219 (Pgl_8)   Bacteroides cellulosilyticus WH2 ALJ61436.1    
 BcellWH2_01213   Bacteroides cellulosilyticus WH2 ALJ58475.1    
 BcellWH2_01858 (PehA)   Bacteroides cellulosilyticus WH2 ALJ59111.1    
 BcellWH2_02081 (Pehx_2)   Bacteroides cellulosilyticus WH2 ALJ59324.1    
 BcellWH2_00939 (Pgl_2)   Bacteroides cellulosilyticus WH2 ALJ58201.1    
 BcellWH2_03125 (Pgl_6)   Bacteroides cellulosilyticus WH2 ALJ60362.1    
 BcellWH2_04062 (Pehx_10)   Bacteroides cellulosilyticus WH2 ALJ61282.1    
 BcellWH2_04835   Bacteroides cellulosilyticus WH2 ALJ62044.1    
 BcellWH2_02325 (Pgl_5)   Bacteroides cellulosilyticus WH2 ALJ59565.1    
 BcellWH2_02088 (Pehx_3)   Bacteroides cellulosilyticus WH2 ALJ59331.1    
 BcellWH2_03074 (Pehx_6)   Bacteroides cellulosilyticus WH2 ALJ60312.1    
 BcellWH2_02323 (Pehx_5)   Bacteroides cellulosilyticus WH2 ALJ59563.1    
 BcellWH2_01637 (Pgl_3)   Bacteroides cellulosilyticus WH2 ALJ58890.1    
 BcellWH2_04851   Bacteroides cellulosilyticus WH2 ALJ62060.1    
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