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Glycoside Hydrolase Family 28

Activities in FamilyXylogalacturonan hydrolase (EC 3.2.1.-);
Endo-polygalacturonase (EC 3.2.1.15);
Rhamnogalacturonase (EC 3.2.1.171);
Rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173);
Galacturonan α-1,4-galacturonidase (EC 3.2.1.67);
Exo-poly-α-digalacturonosidase (EC 3.2.1.82);
Mechanism Inverting a
ClanGH-N
3D Structure Statusparallel β-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (18584); Uniprot accession (178); PDB accession (25); 3D entries (20); cryst (3)
Summary
Download GH28 (22548) Taxonomic display Structure (20 - 3 cryst) Characterized (180)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | ... | 99 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 MLE07_23025   Agrobacterium tumefaciens LN-1 UNZ53617.1    
 MLE07_15005   Agrobacterium tumefaciens LN-1 UNZ52118.1    
 QYR00_15145   Agrobacterium tumefaciens MWF001 WKL21877.1    
 G6L90_15610   Agrobacterium tumefaciens O54/95 WHO23105.1    
 G6L90_24035   Agrobacterium tumefaciens O54/95 WHO24691.1    
 G6M86_16135   Agrobacterium tumefaciens Q15/94 QTG14828.1    
 G6M86_22915   Agrobacterium tumefaciens Q15/94 QTG16095.1    
 AWN88_02925   Agrobacterium tumefaciens S33 AMD58757.1    
 AWN88_10760   Agrobacterium tumefaciens S33 AMD58623.1    
 FY138_15585   Agrobacterium tumefaciens SJ001 UXT34899.1    
 FY138_23775   Agrobacterium tumefaciens SJ001 UXT36416.1    
 FY139_09150   Agrobacterium tumefaciens SJ002 UXT25713.1    
 FY139_00965   Agrobacterium tumefaciens SJ002 UXT24203.1    
 FY140_01030   Agrobacterium tumefaciens SJ003 UXT19376.1    
 FY140_09495   Agrobacterium tumefaciens SJ003 UXT20936.1    
 FY141_15620   Agrobacterium tumefaciens Sta002 UXT14202.1    
 FY141_23805   Agrobacterium tumefaciens Sta002 UXT15709.1    
 FY142_23350   Agrobacterium tumefaciens Sta003 UXT05107.1    
 FY142_15165   Agrobacterium tumefaciens Sta003 UXT03602.1    
 FY143_21800   Agrobacterium tumefaciens Sta004 UXS99415.1    
 FY143_15275   Agrobacterium tumefaciens Sta004 UXS98197.1    
 FY144_22515   Agrobacterium tumefaciens Sta005 UXS88979.1    
 FY144_15695   Agrobacterium tumefaciens Sta005 UXS87713.1    
 FY145_15425   Agrobacterium tumefaciens Sut001 UXS79640.1    
 FY145_23615   Agrobacterium tumefaciens Sut001 UXS81148.1    
 FY146_15605   Agrobacterium tumefaciens Sut002 UXS72015.1    
 FY146_23795   Agrobacterium tumefaciens Sut002 UXS73524.1    
 FY147_15490   Agrobacterium tumefaciens Teh001 UXS64374.1    
 FY147_23520   Agrobacterium tumefaciens Teh001 UXS65858.1    
 FY148_23700   Agrobacterium tumefaciens Teh002 UXS55657.1    
 FY148_15675   Agrobacterium tumefaciens Teh002 UXS54168.1    
 FY149_09320   Agrobacterium tumefaciens Tul001 UXS47405.1    
 FY149_00780   Agrobacterium tumefaciens Tul001 UXS45835.1    
 FY150_15595   Agrobacterium tumefaciens Tul002 UXS41217.1    
 FY150_23990   Agrobacterium tumefaciens Tul002 UXS42777.1    
 FY152_14960   Agrobacterium tumefaciens Tul003 UXS33474.1    
 FY153_15065   Agrobacterium tumefaciens Tul004 UXS25846.1    
 FY153_23095   Agrobacterium tumefaciens Tul004 UXS27333.1    
 FY154_22265   Agrobacterium tumefaciens Yol001 UXS19692.1    
 FY154_15030   Agrobacterium tumefaciens Yol001 UXS18351.1    
 FY155_15035   Agrobacterium tumefaciens Yol002 UXS10990.1    
 FY155_22275   Agrobacterium tumefaciens Yol002 UXS12326.1    
 FY156_17285   Agrobacterium tumefaciens Yub001 UXS03318.1    
 FY156_17945   Agrobacterium tumefaciens Yub001 UXS03442.1    
 FY157_22235   Agrobacterium tumefaciens Yub002 UXR94387.1    
 FY157_15640   Agrobacterium tumefaciens Yub002 UXR93153.1    
 HRR99_20105   Agrobacterium vaccinii B7.6 UHS63837.1    
 HRR99_20155   Agrobacterium vaccinii B7.6 UHS64300.1    
 HRR99_12945   Agrobacterium vaccinii B7.6 UHS62368.1    
 AVCG412_04205   Agrobacterium vitis CG412 UJL72092.1    
 AVCG412_21355   Agrobacterium vitis CG412 UJL75453.1    
 polygalacturonase (PehA) 3.2.1.15 Agrobacterium vitis CG49 AAB51699.1 P77818 1ZFW[nd]
 AVCG678_20510   Agrobacterium vitis CG678 UJL79968.1    
 AVCG678_03730   Agrobacterium vitis CG678 UJL76692.1    
 AVCG78_20515   Agrobacterium vitis CG78 UJL85180.1    
 AVCG78_03725   Agrobacterium vitis CG78 UJL81903.1    
 V6582_04430   Agrobacterium vitis CG957 WWS80270.1    
 K4831_05505   Agrobacterium vitis F2/5 QZO04989.1    
 K4831_20080   Agrobacterium vitis F2/5 QZO05974.1    
 AVF2S5_20115   Agrobacterium vitis F2/5 UJL90296.1    
 AVF2S5_03845   Agrobacterium vitis F2/5 UJL87136.1    
 G6L01_004055   Agrobacterium vitis T60/94 WEO72523.1    
 G6L01_021405   Agrobacterium vitis T60/94 WEO73891.1    
 endo-polygalacturonase precursor, partial (PehA) (fragment)   Agrobacterium vitis TUNAv1 AGG39777.1    
 endo-polygalacturonase precursor, partial (PehA) (fragment)   Agrobacterium vitis TUNAv13 AGG39780.1    
 endo-polygalacturonase precursor, partial (PehA) (fragment)   Agrobacterium vitis TUNAv14 AGG39781.1    
 endo-polygalacturonase precursor, partial (PehA) (fragment)   Agrobacterium vitis TUNAv30 AGG39782.1    
 endo-polygalacturonase precursor, partial (PehA) (fragment)   Agrobacterium vitis TUNAv34 AGG39783.1    
 endo-polygalacturonase precursor, partial (PehA) (fragment)   Agrobacterium vitis TUNAv36 AGG39784.1    
 endo-polygalacturonase precursor, partial (PehA) (fragment)   Agrobacterium vitis TUNAv39 AGG39785.1    
 endo-polygalacturonase precursor, partial (PehA) (fragment)   Agrobacterium vitis TUNAv40 AGG39786.1    
 endo-polygalacturonase precursor, partial (PehA) (fragment)   Agrobacterium vitis TUNAv6 AGG39778.1    
 endo-polygalacturonase precursor, partial (PehA) (fragment)   Agrobacterium vitis TUNAv7 AGG39779.1    
 RvVAR031_33430   Agrobacterium vitis VAR03-1 BCH55733.1    
 RvVAR031_14460 (PglA)   Agrobacterium vitis VAR03-1 BCH53836.1    
 RvVAR0630_44760   Agrobacterium vitis VAR06-30 BCH61852.1    
 RvVAR0630_27570 (PglA)   Agrobacterium vitis VAR06-30 BCH60133.1    
 RvVAT039_27260 (PglA)   Agrobacterium vitis VAT03-9 BCH65510.1    
 RvVAT039_40880   Agrobacterium vitis VAT03-9 BCH66872.1    
 GCM10025877_13710   Agromyces mangrovi NBRC 112812 BDZ64433.1    
 GO499_03675   Algicella marina 9Alg 56 QHQ37278.1    
 SLW71_08915   Algoriphagus sp. NG3 WPR77467.1    
 SLW71_07355   Algoriphagus sp. NG3 WPR77157.1    
 SLW71_08870   Algoriphagus sp. NG3 WPR77458.1    
 SLW71_18780   Algoriphagus sp. NG3 WPR74713.1    
 SLW71_15270   Algoriphagus sp. NG3 WPR78004.1    
 OM944_13170   Algoriphagus sp. TR-M5 UZD21611.1    
 OM944_08480   Algoriphagus sp. TR-M5 UZD24744.1    
 PBT90_14125   Algoriphagus sp. TR-M9 WBL45138.1    
 PBT90_19040   Algoriphagus sp. TR-M9 WBL42823.1    
 Aaci_2457   Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 ACV59463.1    
 TC41_2748   Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1 AEJ44642.1    
 JZ786_10145   Alicyclobacillus ferrooxydans S30H14 QSO49240.1    
 JZ786_10110   Alicyclobacillus ferrooxydans S30H14 QSO49234.1    
 polygalacturonase, partial (fragment)   Alicyclobacillus sp. CGMCC 3147 AFO38194.1    
 GI364_18700   Alicyclobacillus sp. SO9 QQE77922.1    
 CE91St15_21400   Alistipes finegoldii CE91-St15 BDF64654.1    
 CE91St15_21390   Alistipes finegoldii CE91-St15 BDF64653.1    
 Alfi_1087   Alistipes finegoldii DSM 17242 AFL77441.1    
 Alfi_1088   Alistipes finegoldii DSM 17242 AFL77442.1    
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