Glycoside Hydrolase Family 28

Activities in Familypolygalacturonase (EC 3.2.1.15); exo-polygalacturonase (EC 3.2.1.67); exo-polygalacturonosidase (EC 3.2.1.82); rhamnogalacturonase (EC 3.2.1.171); rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173); xylogalacturonan hydrolase (EC 3.2.1.-)
Mechanism Inverting
ClanGH-N
3D Structure Statusparallel β-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (11232); Uniprot accession (1123); PDB accession (20); 3D entries (18); cryst (3)
All (9316) Archaea (16) Bacteria (5082) Eukaryota (4212) unclassified (6) Structure (18 - 3 cryst) Characterized (216)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | ... | 51 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 APA386B_1663   Acetobacter pasteurianus 386B CCT59738.1    
 BN85308510   Acholeplasma brassicae O502 CCV65872.1    
 Aocu_11550   Acholeplasma oculi CDR31228.1    
 BN85405200   Acholeplasma palmae J233 CCV64097.1    
 BN85409040   Acholeplasma palmae J233 CCV64481.1    
 BN85413840   Acholeplasma palmae J233 CCV64961.1    
 ACPOL_6834 (fragment)   Acidisarcina polymorpha SBC82 AXC16044.1    
 ACPOL_2192 (fragment)   Acidisarcina polymorpha SBC82 AXC11516.1    
 ACPOL_5187 (fragment)   Acidisarcina polymorpha SBC82 AXC14441.1    
 ACPOL_2506   Acidisarcina polymorpha SBC82 AXC11828.1    
 ACPOL_0385   Acidisarcina polymorpha SBC82 AXC09764.1    
 ACP_0273   Acidobacterium capsulatum ATCC 51196 ACO31655.1 C1F9C0  
 ACP_0554   Acidobacterium capsulatum ATCC 51196 ACO32308.1 C1F150  
 ACP_2679   Acidobacterium capsulatum ATCC 51196 ACO31589.1 C1F2L9  
 ACP_2677   Acidobacterium capsulatum ATCC 51196 ACO32486.1 C1F2L7  
 H7849_01410   Acidobacterium sp. 4Y35 QNI32703.1    
 C1701_02775   Actinoalloteichus sp. AHMU CJ021 AUS77472.1    
 AMIS_59830   Actinoplanes missouriensis 431 BAL91203.1    
 ACTI_84700   Actinoplanes sp. OR16 BBH71785.1    
 ADH66_08775   Acutalibacter muris KB18 ASB40742.1
QIG70418.1
QQR30023.1
   
 HUW48_03195   Adhaeribacter radiodurans KUDC8001 QMU27096.1    
 HUW48_03085   Adhaeribacter radiodurans KUDC8001 QMU27075.1    
 Pan181_16960 (PehX)   Aeoliella mucimassa Pan181 QDU55506.1    
 Pan181_27560 (PemA)   Aeoliella mucimassa Pan181 QDU56546.1    
 JDW14_09370 (fragment)   Aerococcaceae bacterium zg-252 QQD65467.1    
 At12D13_41850   Agrobacterium fabrum 12D13 AYM65337.1    
 At12D13_28460 (PicA)   Agrobacterium fabrum 12D13 AYM64005.1    
 At1D132_29400 (PicA)   Agrobacterium fabrum 1D132 AYM58952.1    
 At1D132_42550   Agrobacterium fabrum 1D132 AYM60262.1    
 F3P66_15170   Agrobacterium fabrum BG5 QRM60829.1    
 F3P66_22410   Agrobacterium fabrum BG5 QRM62097.1    
 EML540_14430   Agrobacterium fabrum EHA105 QQN12370.1    
 EML540_21375   Agrobacterium fabrum EHA105 QQN13664.1    
 EML4058_14420   Agrobacterium fabrum GV2260 QQN07303.1    
 EML4058_21375   Agrobacterium fabrum GV2260 QQN08599.1    
 EML485_21355   Agrobacterium fabrum GV3101::pMP90 QQN18841.1    
 EML485_14410   Agrobacterium fabrum GV3101::pMP90 QQN17551.1    
 Atu3129 (PicA;Pgu1)   Agrobacterium fabrum str. C58 AAL43945.1
AAK90257.1
NP_357472.1
NP_533629.1
A9CEQ2
A9CEQ2
 
 Atu4560   Agrobacterium fabrum str. C58 AAL45354.1
NP_535038.1
   
 AGR_L_619p   Agrobacterium fabrum str. C58 AAK88883.1
NP_356098.1
Q7CV96  
 CFBP5473_22620   Agrobacterium larrymoorei CFBP5473 QCJ00780.1    
 CFBP5473_16235   Agrobacterium larrymoorei CFBP5473 QCI99547.1    
 B0909_22935   Agrobacterium rhizogenes K599 AQS65377.1    
 B0909_14725   Agrobacterium rhizogenes K599 AQS63636.1    
 EYD00_21780   Agrobacterium sp. 33MFTa1.1 QBJ16022.1    
 EYD00_14390   Agrobacterium sp. 33MFTa1.1 QBJ14699.1    
 GSF67_23480   Agrobacterium sp. CGMCC 11546 QKX00045.1    
 GSF67_16685   Agrobacterium sp. CGMCC 11546 QKW98826.1    
 AGROH133_10592   Agrobacterium sp. H13-3 ADY66273.1    
 AGROH133_13954   Agrobacterium sp. H13-3 ADY67596.1    
 GH983_15475   Agrobacterium sp. MA01 QGG91791.1    
 BSY240_3741   Agrobacterium sp. RAC06 AOG11240.1    
 At12D1_30510 (PicA)   Agrobacterium tumefaciens 12D1 AYM82936.1    
 At12D1_46790   Agrobacterium tumefaciens 12D1 AYM84561.1    
 At15955_41880   Agrobacterium tumefaciens 15955 AYM19173.1    
 At15955_29140   Agrobacterium tumefaciens 15955 AYM17899.1    
 DC439_23035   Agrobacterium tumefaciens 183 QAB00545.1    
 DC439_15050   Agrobacterium tumefaciens 183 QAA99151.1    
 CG010_015705   Agrobacterium tumefaciens 186 QDY95661.1    
 CG010_024075   Agrobacterium tumefaciens 186 QDY97155.1    
 At1D1108_29110 (PicA)   Agrobacterium tumefaciens 1D1108 AYM12537.1    
 At1D1108_42470   Agrobacterium tumefaciens 1D1108 AYM13873.1    
 At1D1460_29760 (PicA)   Agrobacterium tumefaciens 1D1460 AYM07218.1    
 At1D1460_43300   Agrobacterium tumefaciens 1D1460 AYM08571.1    
 At1D1609_46870   Agrobacterium tumefaciens 1D1609 AVH44728.1    
 At1D1609_30910 (PicA)   Agrobacterium tumefaciens 1D1609 AVH43144.1    
 Pgl (fragment)   Agrobacterium tumefaciens A136 AAA22102.1 P27644  
 AtA6_42560   Agrobacterium tumefaciens A6 AYM70472.1    
 AtA6_29820 (PicA)   Agrobacterium tumefaciens A6 AYM69198.1    
 Ach5_29840 (PicA)   Agrobacterium tumefaciens Ach5 AKC08757.1    
 Ach5_42560   Agrobacterium tumefaciens Ach5 AKC10029.1    
 IAI05_23030   Agrobacterium tumefaciens BIM B-1315G QNP82781.1    
 IAI05_15195   Agrobacterium tumefaciens BIM B-1315G QNP81329.1    
 CFBP5499_16350   Agrobacterium tumefaciens CFBP5499 QCL75093.1    
 CFBP5499_24500   Agrobacterium tumefaciens CFBP5499 QCL76552.1    
 CFBP5877_15885   Agrobacterium tumefaciens CFBP5877 QCL80653.1    
 CFBP5877_23755   Agrobacterium tumefaciens CFBP5877 QCL82071.1    
 CFBP6624_23260   Agrobacterium tumefaciens CFBP6624 QCM03051.1    
 CFBP6625_23135   Agrobacterium tumefaciens CFBP6625 QCM13231.1    
 CFBP6626_22310   Agrobacterium tumefaciens CFBP6626 QCM08008.1    
 CFBP7129_26165   Agrobacterium tumefaciens CFBP7129 QCL97713.1    
 CFBP7129_15165   Agrobacterium tumefaciens CFBP7129 QCL95631.1    
 CFBP7129_23960   Agrobacterium tumefaciens CFBP7129 QCL97192.1    
 EML4_14995   Agrobacterium tumefaciens EML4 QLG23713.1    
 EML4_21825   Agrobacterium tumefaciens EML4 QLG24996.1    
 I6I05_26325   Agrobacterium tumefaciens FDAARGOS_1048 QQE36714.1    
 I6I05_19875   Agrobacterium tumefaciens FDAARGOS_1048 QQE35514.1    
 X971_4445   Agrobacterium tumefaciens LBA4213 (Ach5) AHK04289.1    
 X971_3103   Agrobacterium tumefaciens LBA4213 (Ach5) AHK02964.1    
 AWN88_02925   Agrobacterium tumefaciens S33 AMD58757.1    
 AWN88_10760   Agrobacterium tumefaciens S33 AMD58623.1    
 polygalacturonase (PehA) 3.2.1.15 Agrobacterium vitis CG49 AAB51699.1 P77818 1ZFW[nd]
 Avi_1489 (PeH)   Agrobacterium vitis S4 ACM36064.1 B9JUR9  
 Avi_5759   Agrobacterium vitis S4 ACM38832.1 B9K1T4  
 endo-polygalacturonase precursor, partial (PehA) (fragment)   Agrobacterium vitis TUNAv1 AGG39777.1    
 endo-polygalacturonase precursor, partial (PehA) (fragment)   Agrobacterium vitis TUNAv13 AGG39780.1    
 endo-polygalacturonase precursor, partial (PehA) (fragment)   Agrobacterium vitis TUNAv14 AGG39781.1    
 endo-polygalacturonase precursor, partial (PehA) (fragment)   Agrobacterium vitis TUNAv30 AGG39782.1    
 endo-polygalacturonase precursor, partial (PehA) (fragment)   Agrobacterium vitis TUNAv34 AGG39783.1    
 endo-polygalacturonase precursor, partial (PehA) (fragment)   Agrobacterium vitis TUNAv36 AGG39784.1    
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