Glycoside Hydrolase Family 28

Activities in Familypolygalacturonase (EC 3.2.1.15); α-L-rhamnosidase (EC 3.2.1.40); exo-polygalacturonase (EC 3.2.1.67); exo-polygalacturonosidase (EC 3.2.1.82); rhamnogalacturonase (EC 3.2.1.171); rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173); endo-xylogalacturonan hydrolase (EC 3.2.1.-)
Mechanism Inverting
ClanGH-N
3D Structure Status( β )-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (6539); Uniprot accession (1123); PDB accession (17); 3D entries (16); cryst (3)
All (4798) Archaea (11) Bacteria (2167) Eukaryota (2614) unclassified (6) Structure (16 - 3 cryst) Characterized (213)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | ... | 22 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 APA386B_1663   Acetobacter pasteurianus 386B CCT59738.1    
 BN85308510   Acholeplasma brassicae O502 CCV65872.1    
 Aocu_11550   Acholeplasma oculi CDR31228.1    
 BN85405200   Acholeplasma palmae J233 CCV64097.1    
 BN85409040   Acholeplasma palmae J233 CCV64481.1    
 BN85413840   Acholeplasma palmae J233 CCV64961.1    
 ACP_0273   Acidobacterium capsulatum ATCC 51196 ACO31655.1 C1F9C0  
 ACP_0554   Acidobacterium capsulatum ATCC 51196 ACO32308.1 C1F150  
 ACP_2679   Acidobacterium capsulatum ATCC 51196 ACO31589.1 C1F2L9  
 ACP_2677   Acidobacterium capsulatum ATCC 51196 ACO32486.1 C1F2L7  
 AMIS_59830   Actinoplanes missouriensis 431 BAL91203.1    
 ADH66_08775   Acutalibacter muris KB18 ASB40742.1    
 Atu3129 (PicA;Pgu1)   Agrobacterium fabrum str. C58 AAL43945.1
AAK90257.1
NP_357472.1
NP_533629.1
A9CEQ2
A9CEQ2
 
 Atu4560   Agrobacterium fabrum str. C58 AAL45354.1
NP_535038.1
   
 AGR_L_619p   Agrobacterium fabrum str. C58 AAK88883.1
NP_356098.1
Q7CV96  
 B0909_22935   Agrobacterium rhizogenes K599 AQS65377.1    
 B0909_14725   Agrobacterium rhizogenes K599 AQS63636.1    
 AGROH133_10592   Agrobacterium sp. H13-3 ADY66273.1    
 AGROH133_13954   Agrobacterium sp. H13-3 ADY67596.1    
 BSY240_3741   Agrobacterium sp. RAC06 AOG11240.1    
 Pgl (fragment)   Agrobacterium tumefaciens A136 AAA22102.1 P27644  
 Ach5_29840 (PicA)   Agrobacterium tumefaciens Ach5 AKC08757.1    
 Ach5_42560   Agrobacterium tumefaciens Ach5 AKC10029.1    
 X971_4445   Agrobacterium tumefaciens LBA4213 (Ach5) AHK04289.1    
 X971_3103   Agrobacterium tumefaciens LBA4213 (Ach5) AHK02964.1    
 AWN88_02925   Agrobacterium tumefaciens S33 AMD58757.1    
 AWN88_10760   Agrobacterium tumefaciens S33 AMD58623.1    
 polygalacturonase (PehA) 3.2.1.15 Agrobacterium vitis CG49 AAB51699.1 P77818 1ZFW[nd]
 Avi_1489 (PeH)   Agrobacterium vitis S4 ACM36064.1 B9JUR9  
 Avi_5759   Agrobacterium vitis S4 ACM38832.1 B9K1T4  
 endo-polygalacturonase precursor, partial (PehA) (fragment)   Agrobacterium vitis TUNAv1 AGG39777.1    
 endo-polygalacturonase precursor, partial (PehA) (fragment)   Agrobacterium vitis TUNAv13 AGG39780.1    
 endo-polygalacturonase precursor, partial (PehA) (fragment)   Agrobacterium vitis TUNAv14 AGG39781.1    
 endo-polygalacturonase precursor, partial (PehA) (fragment)   Agrobacterium vitis TUNAv30 AGG39782.1    
 endo-polygalacturonase precursor, partial (PehA) (fragment)   Agrobacterium vitis TUNAv34 AGG39783.1    
 endo-polygalacturonase precursor, partial (PehA) (fragment)   Agrobacterium vitis TUNAv36 AGG39784.1    
 endo-polygalacturonase precursor, partial (PehA) (fragment)   Agrobacterium vitis TUNAv39 AGG39785.1    
 endo-polygalacturonase precursor, partial (PehA) (fragment)   Agrobacterium vitis TUNAv40 AGG39786.1    
 endo-polygalacturonase precursor, partial (PehA) (fragment)   Agrobacterium vitis TUNAv6 AGG39778.1    
 endo-polygalacturonase precursor, partial (PehA) (fragment)   Agrobacterium vitis TUNAv7 AGG39779.1    
 APS56_05975   Algibacter alginicilyticus HZ22 ALJ04708.1    
 APS56_12660   Algibacter alginicilyticus HZ22 ALJ05930.1    
 APS56_12675   Algibacter alginicilyticus HZ22 ALJ05933.1    
 Aaci_2457   Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 ACV59463.1 C8WSH8  
 TC41_2748   Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1 AEJ44642.1    
 polygalacturonase, partial (fragment)   Alicyclobacillus sp. CGMCC 3147 AFO38194.1    
 Alfi_1087   Alistipes finegoldii DSM 17242 AFL77441.1    
 Alfi_1088   Alistipes finegoldii DSM 17242 AFL77442.1    
 AL1_11740   Alistipes shahii WAL 8301 CBK63669.1 D4IL57  
 AL1_13900   Alistipes shahii WAL 8301 CBK63844.1 D4ILN2  
 Amet_0899   Alkaliphilus metalliredigens QYMF ABR47121.1 A6TLQ3  
 CDL62_02045   Alkalitalea saponilacus DSM 24412 ASB48011.1    
 CDL62_02080   Alkalitalea saponilacus DSM 24412 ASB51018.1    
 CDL62_02290   Alkalitalea saponilacus DSM 24412 ASB51022.1    
 CDL62_11380   Alkalitalea saponilacus DSM 24412 ASB51139.1    
 AVL56_12155   Alteromonas addita R10SW13 AMJ94975.1    
 EP12_12350   Alteromonas australica DE170 AJP44341.1    
 EP13_11670   Alteromonas australica H 17 AIF99288.1    
 MASE_13670   Alteromonas macleodii ATCC 27126 AFS38240.1    
 ACZ81_14290   Alteromonas macleodii HOT1A3 AMN12642.1    
 ACZ81_11905   Alteromonas macleodii HOT1A3 AMN12225.1    
 AMBAS45_14170   Alteromonas macleodii str. Balearic Sea AD45 AFT96297.1    
 AMBAS45_11955   Alteromonas macleodii str. Balearic Sea AD45 AFT95856.1    
 AMBLS11_13575   Alteromonas macleodii str. Black Sea 11 AFT79286.1    
 AMBLS11_11190   Alteromonas macleodii str. Black Sea 11 AFT78815.1    
 AMEC673_14000   Alteromonas macleodii str. English Channel 673 AFT75482.1    
 AMEC673_11695   Alteromonas macleodii str. English Channel 673 AFT75029.1    
 I633_12770   Alteromonas mediterranea 615 AGP78430.1    
 BM523_10975   Alteromonas mediterranea AR43 APD94485.1    
 BM524_10995   Alteromonas mediterranea CP48 APD90280.1    
 BM525_11015   Alteromonas mediterranea CP49 APD98117.1    
 BM526_11140   Alteromonas mediterranea RG65 APE02360.1    
 I607_11655   Alteromonas mediterranea U4 AGP86116.1    
 I876_12025   Alteromonas mediterranea U7 AGP90254.1    
 I634_11880   Alteromonas mediterranea U8 AGP94075.1    
 AV939_11870   Alteromonas sp. Mac1 AMJ87203.1    
 AV940_11635   Alteromonas sp. Mac2 AMJ91065.1    
 AOR13_1124   Alteromonas stellipolaris LMG 21856 ALM90167.1    
 AVL57_13030   Alteromonas stellipolaris LMG 21861 AMJ74803.1    
 AJAP_04570   Amycolatopsis japonica MG417-CF17 AIG73836.1    
 SAMN04489733_7545   Amycolatopsis keratiniphila FH 1893 SDU64257.1    
 BB31_02975   Amycolatopsis lurida NRRL 2430 AJK52457.1    
 B737_7960   Amycolatopsis mediterranei RB AGT88621.1    
 B737_7705   Amycolatopsis mediterranei RB AGT88366.1    
 B737_4167   Amycolatopsis mediterranei RB AGT84831.1    
 B737_1521   Amycolatopsis mediterranei RB AGT82185.1    
 RAM_40200   Amycolatopsis mediterranei S699 AEK46507.1
AFO81238.1
   
 RAM_07770   Amycolatopsis mediterranei S699 AEK40044.1
AFO75056.1
   
 RAM_41515   Amycolatopsis mediterranei S699 AEK46770.1
AFO81492.1
   
 AMES_4167   Amycolatopsis mediterranei S699 AFO77703.1
AEK42776.1
   
 AMED_1530   Amycolatopsis mediterranei U32 ADJ43343.1 D8HM73  
 AMED_4217   Amycolatopsis mediterranei U32 ADJ45992.1 D8HR90  
 AMED_7821   Amycolatopsis mediterranei U32 ADJ49529.1 D8HQA5  
 AMED_8081   Amycolatopsis mediterranei U32 ADJ49784.1 D8HM21  
 SD37_06155   Amycolatopsis orientalis B-37 ANN15278.1    
 SD37_31825   Amycolatopsis orientalis B-37 ANN19759.1    
 SD37_33125   Amycolatopsis orientalis B-37 ANN19977.1    
 AORI_6908   Amycolatopsis orientalis HCCB10007 AGM09490.1    
 A9P82_10245   Arachidicoccus sp. BS20 ANI89634.1    
 AREALGSMS7_01658 (PehX)   Arenibacter algicola SMS7 ASO05125.1    
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