Glycoside Hydrolase Family 28

Activities in Familypolygalacturonase (EC 3.2.1.15); α-L-rhamnosidase (EC 3.2.1.40); exo-polygalacturonase (EC 3.2.1.67); exo-polygalacturonosidase (EC 3.2.1.82); rhamnogalacturonase (EC 3.2.1.171); rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173); xylogalacturonan hydrolase (EC 3.2.1.-)
Mechanism Inverting
ClanGH-N
3D Structure Status( β )-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (8667); Uniprot accession (1123); PDB accession (18); 3D entries (17); cryst (3)
All (6842) Archaea (11) Bacteria (3480) Eukaryota (3344) Viruses (1) unclassified (6) Structure (17 - 3 cryst) Characterized (219)
| 1 | ... | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | ... | 35 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 Calow_2114   Caldicellulosiruptor owensensis OL ADQ05623.1 E4Q6L6  
 Csac_0361   Caldicellulosiruptor saccharolyticus DSM 8903 ABP66002.1 A4XGG7  
 Csac_0664   Caldicellulosiruptor saccharolyticus DSM 8903 ABP66284.1 A4XH99  
 Acid_0671   Candidatus Solibacter usitatus Ellin6076 ABJ81672.1 Q02B94  
 Acid_0672   Candidatus Solibacter usitatus Ellin6076 ABJ81673.1 Q02B93  
 Acid_0674   Candidatus Solibacter usitatus Ellin6076 ABJ81675.1 Q02B91  
 Acid_1250   Candidatus Solibacter usitatus Ellin6076 ABJ82244.1 Q029N2  
 Acid_2983   Candidatus Solibacter usitatus Ellin6076 ABJ83967.1 Q022X9  
 Acid_3985   Candidatus Solibacter usitatus Ellin6076 ABJ84952.1 Q01ZG3  
 Acid_4057   Candidatus Solibacter usitatus Ellin6076 ABJ85022.1 Q01Z93  
 Acid_4847   Candidatus Solibacter usitatus Ellin6076 ABJ85806.1 Q01X09  
 Acid_6868   Candidatus Solibacter usitatus Ellin6076 ABJ87782.1 Q01RD8  
 Acid_7770 (probable fragment)   Candidatus Solibacter usitatus Ellin6076 ABJ88668.1 Q01NV2  
 Acid_7773   Candidatus Solibacter usitatus Ellin6076 ABJ88671.1 Q01NU9  
 CGC48_06355   Capnocytophaga cynodegmi G7591 ATA68284.1    
 C2869_22345   Catenovulum sp. CCB-QB4 AWB69242.1    
 C2869_22120   Catenovulum sp. CCB-QB4 AWB69201.1    
 Caci_3629   Catenulispora acidiphila DSM 44928 ACU72532.1 C7QAN3  
 Caci_3630   Catenulispora acidiphila DSM 44928 ACU72533.1 C7QBR4  
 Caci_6877   Catenulispora acidiphila DSM 44928 ACU75715.1 C7Q3F0  
 Caci_3464   Catenulispora acidiphila DSM 44928 ACU72370.1 C7Q950  
 C1707_08995   Caulobacter flavus RHGG3 AYV46384.1    
 C1707_22005   Caulobacter flavus RHGG3 AYV48719.1    
 C1707_14100   Caulobacter flavus RHGG3 AYV47301.1    
 Cseg_2732   Caulobacter segnis ATCC 21756 ADG11181.1 D5VL08  
 B7G68_13970   Caulobacter segnis TK0059 AVQ04462.1    
 CA607_03060   Caulobacter vibrioides CB1 ATC27417.1    
 CC0572   Caulobacter vibrioides CB15 AAK22558.1
NP_419390.1
Q9AAM5  
 CA608_03005   Caulobacter vibrioides CB2 ATC23572.1    
 EIB18_03075   Caulobacter vibrioides CB2A AZH11796.1    
 CCNA_00608   Caulobacter vibrioides NA1000 ACL94073.1 B8H0H4  
 LH89_13825   Cedecea neteri ND14b AIR70226.1    
 LH89_17115   Cedecea neteri ND14b AIR70851.1    
 LH89_06495   Cedecea neteri ND14b AIR68876.1    
 IMCC12053_3089   Celeribacter marinus IMCC 12053 ALI57036.1    
 Celal_2476   Cellulophaga algicola DSM 14237 ADV49764.1    
 Celal_2479   Cellulophaga algicola DSM 14237 ADV49767.1    
 M666_09660   Cellulophaga baltica 18 AIZ41826.1    
 M666_09675   Cellulophaga baltica 18 AIZ41828.1    
 M667_09745   Cellulophaga baltica NN016038 AIY13475.1    
 M667_09730   Cellulophaga baltica NN016038 AIY15326.1    
 A5M85_02260   Cellulophaga lytica DAU203 APU09152.1    
 Celly_0434   Cellulophaga lytica DSM 7489 ADY28269.1    
 IX49_01870   Cellulophaga lytica HI1 AIM59338.1    
 Clole_1226   Cellulosilyticum lentocellum DSM 5427 ADZ82954.1    
 ORF   Cellulosilyticum ruminicola CGMCC 1.5065 ACZ98650.1 D2KFP8  
 EKH84_08820   Cellulosilyticum sp. WCF-2 QEH68470.1    
 EKH84_06615   Cellulosilyticum sp. WCF-2 QEH68079.1    
 FY115_00845   Cellvibrio japonicus ADPT1-KOJIBIOSE QEI21171.1    
 FY116_00845   Cellvibrio japonicus ADPT2-NIGEROSE QEI17596.1    
 FY117_00845   Cellvibrio japonicus ADPT3-ISOMALTOSE QEI14022.1    
 CJA_0172 (Pga28A)   Cellvibrio japonicus Ueda107 ACE86080.1 B3PGB7  
 CBR65_11470   Cellvibrio sp. PSBB006 ARU27996.1    
 CBR65_17330   Cellvibrio sp. PSBB006 ARU29059.1    
 B0D95_13025   Cellvibrio sp. PSBB023 AQT62443.1    
 B0D95_19360   Cellvibrio sp. PSBB023 AQT62542.1    
 Z042_11045   Chania multitudinisentens RB-25 AHG20102.1
AHG20102.2
   
 Z042_19390   Chania multitudinisentens RB-25 AHG21527.1    
 Z042_26490   Chania multitudinisentens RB-25 AJW29005.1    
 Cpin_5506   Chitinophaga pinensis DSM 2588 ACU62935.1 C7PV26  
 Cpin_5903   Chitinophaga pinensis DSM 2588 ACU63321.1 C7PEB2  
 CK934_01170   Chitinophaga sp. MD30 ASZ09680.1    
 CK934_01175   Chitinophaga sp. MD30 ASZ09681.1    
 DLD77_09855   Chitinophaga sp. T22 AWO01979.1    
 EB354_16845   Chryseobacterium balustinum KC_1863 AZB30781.1    
 EB354_10250   Chryseobacterium balustinum KC_1863 AZB29605.1    
 EB354_10355   Chryseobacterium balustinum KC_1863 AZB29623.1    
 EG345_05170   Chryseobacterium carnipullorum F9942 AZA64156.1    
 EG346_14235   Chryseobacterium carnipullorum G0188 AZA49262.1    
 A0O34_05050   Chryseobacterium glaciei IHBB 10212 ANF49936.1    
 A0O34_16000   Chryseobacterium glaciei IHBB 10212 ANF53202.1    
 A0O34_16090   Chryseobacterium glaciei IHBB 10212 ANF51938.1    
 EG358_10235   Chryseobacterium indoltheticum ATCC 27950 AZA74106.1    
 EG358_04635   Chryseobacterium indoltheticum ATCC 27950 AZA73098.1    
 EG358_10140   Chryseobacterium indoltheticum ATCC 27950 AZA74088.1    
 EG340_04815   Chryseobacterium indoltheticum G0211 AZA60399.1    
 EG340_09465   Chryseobacterium indoltheticum G0211 AZA61245.1    
 EG340_04910   Chryseobacterium indoltheticum G0211 AZA60417.1    
 EG349_04550   Chryseobacterium shandongense G0207 AZA88905.1    
 EG349_04645   Chryseobacterium shandongense G0207 AZA86121.1    
 EG349_16305   Chryseobacterium shandongense G0207 AZA88236.1    
 EG350_12015   Chryseobacterium shandongense G0239 AZA59443.1    
 EG350_03965   Chryseobacterium shandongense G0239 AZA56395.1    
 EG350_12110   Chryseobacterium shandongense G0239 AZA57881.1    
 EG353_02670   Chryseobacterium shandongense H5143 AZA94532.1    
 EG353_15095   Chryseobacterium shandongense H5143 AZA96798.1    
 EG353_02575   Chryseobacterium shandongense H5143 AZA97846.1    
 EAG08_18955   Chryseobacterium sp. 3008163 AYN02097.1    
 EAG08_06810   Chryseobacterium sp. 3008163 AYN00077.1    
 EAG08_18840   Chryseobacterium sp. 3008163 AYN02077.1    
 EG348_00110   Chryseobacterium sp. G0201 AZA51516.1    
 EG348_10445   Chryseobacterium sp. G0201 AZA53397.1    
 EG348_00205   Chryseobacterium sp. G0201 AZA51534.1    
 ATE47_05900   Chryseobacterium sp. IHB B 17019 ALR30083.1    
 ATE47_05980   Chryseobacterium sp. IHB B 17019 ALR32508.1    
 ATE47_05805   Chryseobacterium sp. IHB B 17019 ALR30065.1    
 CCALI_02545   Chthonomonas calidirosea T49 CCW36339.1    
 AL479_13075   Citrobacter amalonaticus FDAARGOS_122 AMG93353.1    
 F384_00700   Citrobacter amalonaticus Y19 AKE57765.1    
 CI104_05095   Citrobacter farmeri AUSMDU00008141 AST78508.1    
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