Glycoside Hydrolase Family 28

Activities in Familypolygalacturonase (EC 3.2.1.15); exo-polygalacturonase (EC 3.2.1.67); exo-polygalacturonosidase (EC 3.2.1.82); rhamnogalacturonase (EC 3.2.1.171); rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173); xylogalacturonan hydrolase (EC 3.2.1.-)
Mechanism Inverting
ClanGH-N
3D Structure Status( β )-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (10140); Uniprot accession (1123); PDB accession (18); 3D entries (17); cryst (3)
All (8242) Archaea (14) Bacteria (4426) Eukaryota (3795) Viruses (1) unclassified (6) Structure (17 - 3 cryst) Characterized (215)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | ... | 45 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 A3BBH6_22530   Alistipes onderdonkii subsp. vulgaris 3BBH6 BBL02017.1    
 AL1_11740   Alistipes shahii WAL 8301 CBK63669.1 D4IL57  
 AL1_13900   Alistipes shahii WAL 8301 CBK63844.1 D4ILN2  
 BkAM31D_06485 (Pgl_1)   Alkalihalobacillus krulwichiae AM31D ARK29533.1    
 BkAM31D_06535 (Pgl_2)   Alkalihalobacillus krulwichiae AM31D ARK29543.1    
 Amet_0899   Alkaliphilus metalliredigens QYMF ABR47121.1 A6TLQ3  
 CDL62_02045   Alkalitalea saponilacus DSM 24412 ASB48011.1    
 CDL62_02080   Alkalitalea saponilacus DSM 24412 ASB51018.1    
 CDL62_02290   Alkalitalea saponilacus DSM 24412 ASB51022.1    
 CDL62_11380   Alkalitalea saponilacus DSM 24412 ASB51139.1    
 AVL56_12155   Alteromonas addita R10SW13 AMJ94975.1    
 EP12_12350   Alteromonas australica DE170 AJP44341.1    
 EP13_11670   Alteromonas australica H 17 AIF99288.1    
 MASE_13670   Alteromonas macleodii ATCC 27126 AFS38240.1    
 ACZ81_14290   Alteromonas macleodii HOT1A3 AMN12642.1    
 ACZ81_11905   Alteromonas macleodii HOT1A3 AMN12225.1    
 AMBAS45_14170   Alteromonas macleodii str. Balearic Sea AD45 AFT96297.1    
 AMBAS45_11955   Alteromonas macleodii str. Balearic Sea AD45 AFT95856.1    
 AMBLS11_13575   Alteromonas macleodii str. Black Sea 11 AFT79286.1    
 AMBLS11_11190   Alteromonas macleodii str. Black Sea 11 AFT78815.1    
 AMEC673_14000   Alteromonas macleodii str. English Channel 673 AFT75482.1    
 AMEC673_11695   Alteromonas macleodii str. English Channel 673 AFT75029.1    
 TE101_14300   Alteromonas macleodii Te101 AUI83382.1    
 TE101_11925   Alteromonas macleodii Te101 AUI82958.1    
 I633_12770   Alteromonas mediterranea 615 AGP78430.1    
 FJN15_10905   Alteromonas mediterranea AltCH17 QGX62240.1    
 BM523_10975   Alteromonas mediterranea AR43 APD94485.1    
 BM524_10995   Alteromonas mediterranea CP48 APD90280.1    
 BM525_11015   Alteromonas mediterranea CP49 APD98117.1    
 FJN14_10600   Alteromonas mediterranea PT15 QDG38875.1    
 BM526_11140   Alteromonas mediterranea RG65 APE02360.1    
 I607_11655   Alteromonas mediterranea U4 AGP86116.1    
 I876_12025   Alteromonas mediterranea U7 AGP90254.1    
 I634_11880   Alteromonas mediterranea U8 AGP94075.1    
 CA267_004880   Alteromonas pelagimontana 5.12 QJR80156.1    
 CA267_010125   Alteromonas pelagimontana 5.12 QJR81109.1    
 AltI4_42170   Alteromonas sp. I4 BBO29829.1    
 AltI4_29740   Alteromonas sp. I4 BBO28586.1    
 AV939_11870   Alteromonas sp. Mac1 AMJ87203.1    
 AV940_11635   Alteromonas sp. Mac2 AMJ91065.1    
 DS731_01775   Alteromonas sp. RKMC-009 AYA62835.1    
 DS731_08210   Alteromonas sp. RKMC-009 AYA63985.1    
 AOR13_1124   Alteromonas stellipolaris LMG 21856 ALM90167.1    
 AVL57_13030   Alteromonas stellipolaris LMG 21861 AMJ74803.1    
 AJAP_04570   Amycolatopsis japonica MG417-CF17 AIG73836.1    
 SAMN04489733_7545   Amycolatopsis keratiniphila FH 1893 SDU64257.1    
 BB31_02975   Amycolatopsis lurida NRRL 2430 AJK52457.1    
 B737_7960   Amycolatopsis mediterranei RB AGT88621.1    
 B737_7705   Amycolatopsis mediterranei RB AGT88366.1    
 B737_4167   Amycolatopsis mediterranei RB AGT84831.1    
 B737_1521   Amycolatopsis mediterranei RB AGT82185.1    
 RAM_40200   Amycolatopsis mediterranei S699 AEK46507.1
AFO81238.1
   
 RAM_07770   Amycolatopsis mediterranei S699 AEK40044.1
AFO75056.1
   
 RAM_41515   Amycolatopsis mediterranei S699 AEK46770.1
AFO81492.1
   
 AMES_4167   Amycolatopsis mediterranei S699 AFO77703.1
AEK42776.1
   
 AMED_1530   Amycolatopsis mediterranei U32 ADJ43343.1 D8HM73  
 AMED_4217   Amycolatopsis mediterranei U32 ADJ45992.1 D8HR90  
 AMED_7821   Amycolatopsis mediterranei U32 ADJ49529.1 D8HQA5  
 AMED_8081   Amycolatopsis mediterranei U32 ADJ49784.1 D8HM21  
 SD37_06155   Amycolatopsis orientalis B-37 ANN15278.1    
 SD37_31825   Amycolatopsis orientalis B-37 ANN19759.1    
 SD37_33125   Amycolatopsis orientalis B-37 ANN19977.1    
 AORI_6908   Amycolatopsis orientalis HCCB10007 AGM09490.1    
 HUT10_04640   Amycolatopsis sp. Hca4 QKV81048.1    
 HUT10_34060   Amycolatopsis sp. Hca4 QKV78250.1    
 HUT10_19510   Amycolatopsis sp. Hca4 QKV75716.1    
 YIM_16230 (PehX)   Amycolatopsis sp. YIM 10 QFU88426.1    
 Ana3638_16490   Anaerocolumna sp. CBA3638 QHQ62181.1    
 FRZ59_16485   Anseongella ginsenosidimutans Gsoil 524 QEC53776.1    
 D1816_09240   Aquimarina sp. AD10 AXT63637.1    
 D1816_09245   Aquimarina sp. AD10 AXT60526.1    
 D1818_05055   Aquimarina sp. BL5 AXT50226.1    
 D1818_05065   Aquimarina sp. BL5 AXT50227.1    
 OJF2_33010 (PehX)   Aquisphaera giovannonii OJF2 QEH34759.1    
 FSB73_14410   Arachidicoccus ginsenosidivorans Gsoil 809 QEC74296.1    
 FSB73_14345   Arachidicoccus ginsenosidivorans Gsoil 809 QEC72685.1    
 FSB73_14370   Arachidicoccus ginsenosidivorans Gsoil 809 QEC72689.1    
 FSB73_09555 (fragment)   Arachidicoccus ginsenosidivorans Gsoil 809 QEC71873.1    
 FSB73_07725   Arachidicoccus ginsenosidivorans Gsoil 809 QEC71574.1    
 FSB73_06325 (fragment)   Arachidicoccus ginsenosidivorans Gsoil 809 QEC71344.1    
 FSB73_22715   Arachidicoccus ginsenosidivorans Gsoil 809 QEC74399.1    
 FSB73_14440   Arachidicoccus ginsenosidivorans Gsoil 809 QEC72698.1    
 FSB73_09510   Arachidicoccus ginsenosidivorans Gsoil 809 QEC74254.1    
 FSB73_09550 (fragment)   Arachidicoccus ginsenosidivorans Gsoil 809 QEC71872.1    
 E0W69_019750   Arachidicoccus sp. B3-10 QES90791.1    
 E0W69_009085   Arachidicoccus sp. B3-10 QES88799.1    
 E0W69_006945 (fragment)   Arachidicoccus sp. B3-10 QES88405.1    
 E0W69_007845   Arachidicoccus sp. B3-10 QES88576.1    
 E0W69_008090   Arachidicoccus sp. B3-10 QES88617.1    
 E0W69_009125   Arachidicoccus sp. B3-10 QES88807.1    
 A9P82_10245   Arachidicoccus sp. BS20 ANI89634.1    
 D6B99_08900   Arachidicoccus sp. KIS59-12 AYD49369.1    
 D6B99_03870   Arachidicoccus sp. KIS59-12 AYD46826.1    
 D6B99_12125   Arachidicoccus sp. KIS59-12 AYD48282.1    
 D6B99_06550   Arachidicoccus sp. KIS59-12 AYD47300.1    
 D6B99_09050   Arachidicoccus sp. KIS59-12 AYD47728.1    
 D6B99_09890   Arachidicoccus sp. KIS59-12 AYD47873.1    
 D6B99_06365   Arachidicoccus sp. KIS59-12 AYD47266.1    
 D6B99_08910   Arachidicoccus sp. KIS59-12 AYD47708.1    
 D6B99_09885   Arachidicoccus sp. KIS59-12 AYD47872.1    
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