Glycoside Hydrolase Family 28

Activities in Familypolygalacturonase (EC 3.2.1.15); exo-polygalacturonase (EC 3.2.1.67); exo-polygalacturonosidase (EC 3.2.1.82); rhamnogalacturonase (EC 3.2.1.171); rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173); xylogalacturonan hydrolase (EC 3.2.1.-)
Mechanism Inverting
ClanGH-N
3D Structure Status( β )-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (10140); Uniprot accession (1123); PDB accession (18); 3D entries (17); cryst (3)
All (8242) Archaea (14) Bacteria (4426) Eukaryota (3795) Viruses (1) unclassified (6) Structure (17 - 3 cryst) Characterized (215)
| 1 | ... | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | ... | 45 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 CEA_G3691   Clostridium acetobutylicum EA 2018 ADZ22728.1    
 DK921_11535   Clostridium acetobutylicum LJ4 AWV80720.1    
 DK921_08130   Clostridium acetobutylicum LJ4 AWV80060.1    
 CAETHG_0930   Clostridium autoethanogenum DSM 10061 AGY75155.1
ALU35327.1
   
 HLV60_09200   Clostridium butyricum 16-3 QJU44532.1    
 FBD76_15410   Clostridium butyricum 4-1 QCJ07683.1    
 NPD4_2318   Clostridium butyricum CDC_51208 APF22263.1    
 EBL75_12200   Clostridium butyricum CFSA3987 QGH22295.1    
 EBQ27_12205   Clostridium butyricum CFSA3989 QGH26334.1    
 ATD26_10365   Clostridium butyricum JKY6D1 ALS17253.1    
 ATN24_11420   Clostridium butyricum KNU-L09 ALP90718.1    
 Cbu04g_15460   Clostridium butyricum NBRC 13949 BBK76538.1    
 DRB99_09415   Clostridium butyricum S-45-5 AXB85178.1    
 BBB49_10050   Clostridium butyricum TK520 AOR94407.1    
 AZ909_09870   Clostridium butyricum TOA ANF14341.1    
 Ccar_10400   Clostridium carboxidivorans P7 AKN31240.1    
 endopolygalacturonase (Epg28A)   Clostridium cellulovorans BAV13170.1    
 Clocel_2254   Clostridium cellulovorans 743B ADL51993.1 D9SP28  
 A7L45_05315   Clostridium estertheticum subsp. estertheticum DSM 8809 APC39525.1    
 BJL90_09320   Clostridium formicaceticum ATCC 27076 AOY76083.1    
 CLFO_07670 (PgL)   Clostridium formicaceticum DSM 92 ARE86445.1    
 CLJU_c29360   Clostridium ljungdahlii DSM 13528 ADK15984.1 D8GPA6  
 CSACC_18970 (PehX)   Clostridium saccharobutylicum BAS/B3/SW/136 AQS00081.1    
 CLSA_c18950 (PehX)   Clostridium saccharobutylicum DSM 13864 AGX42880.1    
 CLOSACC_18970 (PehX)   Clostridium saccharobutylicum NCP 195 AQS14064.1    
 CLOSC_18900 (PehX)   Clostridium saccharobutylicum NCP 200 AQR90175.1    
 CLOBY_20070 (PehX)   Clostridium saccharobutylicum NCP 258 AQS09868.1    
 Cspa_c33380   Clostridium saccharoperbutylacetonicum N1-4(HMT) AGF57099.1    
 Cspa_c52840   Clostridium saccharoperbutylacetonicum N1-4(HMT) AGF59029.1    
 CLSAP_31050 (Pgl_2)   Clostridium saccharoperbutylacetonicum N1-504 AQR95789.1    
 SAMN02745906_0330   [Clostridium] sphenoides JCM 1415 ATCC 19403 SET55359.1    
 SAMN02745906_3046   [Clostridium] sphenoides JCM 1415 ATCC 19403 SET92437.1    
 HH215_27140   Cohnella sp. MFER-1 QJD86476.1    
 HH215_18205   Cohnella sp. MFER-1 QJD84920.1    
 HH215_32645   Cohnella sp. MFER-1 QJD87459.1    
 HH215_18200   Cohnella sp. MFER-1 QJD84919.1    
 CFU_0329 (PglA)   Collimonas fungivorans Ter331 AEK60167.1    
 GXM19_09515   Collinsella aerofaciens ATCC 25986 JCM 10188 QIA34431.1    
 CSV91_09370   Collinsella aerofaciens indica ATP54717.1    
 Caka_0458   Coraliomargarita akajimensis DSM 45221 ADE53483.1 D5EN48  
 Corgl_1672 (possible frameshift)   Coriobacterium glomerans PW2 AEB07770.1    
 FK523_01500   Curtobacterium flaccumfaciens pv. flaccumfaciens Cff1037 QKS86335.1    
 GA0004736_0874   Curtobacterium sp. 9128 SBN61977.1    
 SAMN06298216_3772   Cytophagales bacterium TFI 002 SOE23384.1    
 SAMN06298216_3906   Cytophagales bacterium TFI 002 SOE23521.1    
 SAMN06298216_3430   Cytophagales bacterium TFI 002 SOE23038.1    
 SAMN06298216_1614   Cytophagales bacterium TFI 002 SOE21142.1    
 AKL17_3864   Defluviimonas alba cai42 AMY71086.1    
 DAQ1742_04251 (PehX)   Dickeya aquatica 174/2 SLM65008.1    
 DAQ1742_03542 (PehK)   Dickeya aquatica 174/2 SLM64342.1    
 exo-polygalacturonosidase (PehX) 3.2.1.82 Dickeya chrysanthemi EC16 AAA24842.1 P15922  
 Dd1591_0152   Dickeya chrysanthemi Ech1591 ACT05045.1 C6CGH4  
 Dd1591_3030   Dickeya chrysanthemi Ech1591 ACT07852.1 C6CQQ8  
 Dd1591_0153   Dickeya chrysanthemi Ech1591 ACT05046.1 C6CGH5  
 Dd1591_0824   Dickeya chrysanthemi Ech1591 ACT05703.1 C6CLR6  
 polygalacturonase (PehN;Dda3937_04155) 3.2.1.15 Dickeya dadantii 3937 ADM97429.1
CAC83614.1
E0SDX9
Q8KKH7
 
 Dda3937_00206 (PehK)   Dickeya dadantii 3937 ADM99816.1 E0SDK6  
 exo-polygalacturonosidase (PehX;Dda3937_00261) 3.2.1.82 Dickeya dadantii 3937 ADN00467.1
CAB99320.1
E0SKR4
Q9K5A0
 
 exo-polygalacturonosidase (PehW;Dda3937_00262) 3.2.1.82 Dickeya dadantii 3937 ADN00466.1
CAB99319.1
E0SKR3
Q9K5A1
 
 exo-polygalacturonosidase (PehV;Dda3937_00263) 3.2.1.82 Dickeya dadantii 3937 ADN00465.1
CAB99318.1
E0SKR2
Q9K5A2
 
 DZA65_01201 (PehA)   Dickeya dianthicola ME23 AYC18103.1    
 DZA65_04140 (Pehx_1)   Dickeya dianthicola ME23 AYC20979.1    
 DZA65_04141 (Pehx_2)   Dickeya dianthicola ME23 AYC20980.1    
 DDI_0933   Dickeya dianthicola RNS04.9 ATO32101.1    
 DDI_4012   Dickeya dianthicola RNS04.9 ATO35180.1    
 DDI_4013   Dickeya dianthicola RNS04.9 ATO35181.1    
 CVE23_17710   Dickeya fangzhongdai DSM 101947 ATZ95640.1    
 CVE23_06210   Dickeya fangzhongdai DSM 101947 ATZ93609.1    
 CVE23_21045   Dickeya fangzhongdai DSM 101947 ATZ96242.1    
 B6N31_05855   Dickeya fangzhongdai PA1 AYH47252.1    
 B6N31_20700   Dickeya fangzhongdai PA1 AYH49895.1    
 B6N31_17445   Dickeya fangzhongdai PA1 AYH49298.1    
 Dd703_0200   Dickeya paradisiaca Ech703 ACS84017.1 C6C799  
 Dd703_0972   Dickeya paradisiaca Ech703 ACS84778.1 C6CBJ3  
 Dpoa569_000250   Dickeya poaceiphila NCPPB 569 QDX28614.1    
 BJD21_13360   Dickeya solani D s0432-1 AUH09361.1    
 BJD21_06305   Dickeya solani D s0432-1 AUH08109.1    
 BJD21_13375   Dickeya solani D s0432-1 AUH09364.1    
 BJD21_13365   Dickeya solani D s0432-1 AUH09362.1    
 DSOL99_04030 (Pehx_3)   Dickeya solani IFB 0099 AYQ53927.1    
 DSOL99_01151 (PehA)   Dickeya solani IFB 0099 AYQ51146.1    
 DSOL99_04028 (Pehx_1)   Dickeya solani IFB 0099 AYQ53925.1    
 DSOL99_04029 (Pehx_2)   Dickeya solani IFB 0099 AYQ53926.1    
 HAT87_01151 (PehA)   Dickeya solani IFB0167 QKO04510.1    
 HAT87_04011 (Pehx_2)   Dickeya solani IFB0167 QKO07272.1    
 HAT87_04012 (Pehx_3)   Dickeya solani IFB0167 QKO07273.1    
 HAT87_04010 (Pehx_1)   Dickeya solani IFB0167 QKO07271.1    
 CTB91_01145 (PehA)   Dickeya solani IFB0223 AYQ46974.1    
 CTB91_04032 (Pehx_3)   Dickeya solani IFB0223 AYQ49763.1    
 CTB91_04030 (Pehx_1)   Dickeya solani IFB0223 AYQ49761.1    
 CTB91_04031 (Pehx_2)   Dickeya solani IFB0223 AYQ49762.1    
 HAT89_01150 (PehA)   Dickeya solani IFB0231 QKO08655.1    
 HAT89_04017 (Pehx_3)   Dickeya solani IFB0231 QKO11424.1    
 HAT89_04015 (Pehx_1)   Dickeya solani IFB0231 QKO11422.1    
 HAT89_04016 (Pehx_2)   Dickeya solani IFB0231 QKO11423.1    
 HAT91_04296 (Pehx_1)   Dickeya solani IFB0417 QKO15854.1    
 HAT91_04297 (Pehx_2)   Dickeya solani IFB0417 QKO15855.1    
 HAT91_04298 (Pehx_3)   Dickeya solani IFB0417 QKO15856.1    
 HAT91_01223 (PehA)   Dickeya solani IFB0417 QKO12879.1    
 HAT92_01157 (PehA)   Dickeya solani IFB0421 QKO17259.1    
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