Glycoside Hydrolase Family 106

Activities in Familyα-L-rhamnosidase (EC 3.2.1.40); rhamnogalacturonan α-L-rhamnohydrolase (EC 3.2.1.174)
Mechanism inverting
3D Structure Status( β / α ) 8
Catalytic Nucleophile/BaseNot known
Catalytic Proton DonorNot known
NoteCreated after reading Miyata et al (2005) Curr Microbiol. 51:105-109
External resourcesCAZypedia;
Statistics GenBank accession (800); Uniprot accession (57); PDB accession (3); 3D entries (1); cryst (0)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 TQ38_028535   Novosphingobium sp. P6W AXB80495.1    
 TQ38_028660 (fragment)   Novosphingobium sp. P6W AXB80514.1    
 TQ38_027725   Novosphingobium sp. P6W AXB80360.1    
 α-L-rhamnosidase (PP1Y_RS05470; PP1Y_Mpl10172) 3.2.1.40 Novosphingobium sp. PP1Y CCA90848.1    
 C7W88_11455   Novosphingobium sp. THN1 AXU20654.1    
 glycoside hydrolase family protein   Ochrobactrum sp. PW1 BBA74477.1    
 FKG96_26010   Olivibacter sp. LS-1 QEL04137.1    
 FKG96_25745   Olivibacter sp. LS-1 QEL04088.1    
 FKG96_25860   Olivibacter sp. LS-1 QEL04108.1    
 FKG96_08735   Olivibacter sp. LS-1 QEL00891.1    
 OPIT5_10570 (probable fragment)   Opitutaceae bacterium TAV5 AHF90579.1    
 OPIT5_17755   Opitutaceae bacterium TAV5 AHF91789.1    
 OPIT5_28620 (fragment)   Opitutaceae bacterium TAV5 AHF94863.1    
 Oter_1346   Opitutus terrae PB90-1 ACB74631.1 B1ZRE4  
 glucuronoyl esterase (Oter_2278;OtCE15C) 3.1.1.- Opitutus terrae PB90-1 ACB75560.1 B1ZPV7  
 Oweho_2028   Owenweeksia hongkongensis DSM 17368 AEV33004.1    
 Back11_63670   Paenibacillus baekrokdamisoli KCTC 33723 BBH25022.1    
 Back11_63850 (fragment)   Paenibacillus baekrokdamisoli KCTC 33723 BBH25040.1    
 Back11_07780   Paenibacillus baekrokdamisoli KCTC 33723 BBH19433.1    
 VN24_06320   Paenibacillus beijingensis DSM 24997 AJY74264.1    
 PBOR_09520   Paenibacillus borealis DSM 13188 AIQ57144.1    
 AR543_15890   Paenibacillus bovis BD3526 ANF97336.1    
 A3958_23145   Paenibacillus glucanolyticus 5162 ANA82692.1    
 C7121_21830   Paenibacillus glucanolyticus W10507 AVV58567.1    
 PGRAT_09170   Paenibacillus graminis DSM 15220 AIQ67784.1    
 BBD41_00190   Paenibacillus ihbetae IHBB 9852 ANY71138.1    
 B4V02_13125   Paenibacillus kribbensis AM49 ASR47547.1    
 D5F53_14910   Paenibacillus lautus E7593-69 AYB44481.1    
 PM3016_2295   Paenibacillus mucilaginosus 3016 AFC29183.1    
 PM3016_2588   Paenibacillus mucilaginosus 3016 AFC29472.1    
 PM3016_4138   Paenibacillus mucilaginosus 3016 AFC30916.1    
 PM3016_4178 (fragment)   Paenibacillus mucilaginosus 3016 AFC30956.1    
 B2K_11595   Paenibacillus mucilaginosus K02 AFH61355.1
AFH61355.2
   
 B2K_13125   Paenibacillus mucilaginosus K02 AFH61649.2    
 B2K_39690   Paenibacillus mucilaginosus K02 AGN70731.1    
 B2K_39700 (fragment)   Paenibacillus mucilaginosus K02 AGN70732.1    
 KNP414_02321   Paenibacillus mucilaginosus KNP414 AEI40882.1    
 KNP414_01994   Paenibacillus mucilaginosus KNP414 AEI40555.1    
 KNP414_04730   Paenibacillus mucilaginosus KNP414 AEI43260.1    
 KNP414_04765 (fragment)   Paenibacillus mucilaginosus KNP414 AEI43295.1    
 VK72_25715   Paenibacillus polymyxa ATCC 15970 APQ61832.1    
 LK13_00050   Paenibacillus polymyxa CF05 AIY07063.1    
 PPSQR21_024620   Paenibacillus polymyxa SQR-21 SQR21 AHM66104.1    
 PRIO_1914   Paenibacillus riograndensis SBR5 CQR54324.1    
 PRIO_5426   Paenibacillus riograndensis SBR5 CQR57815.1    
 BBD42_04125   Paenibacillus sp. BIHB4019 ANY65741.1    
 BBD42_16165   Paenibacillus sp. BIHB4019 ANY67834.1    
 B9D94_14500   Paenibacillus sp. Cedars AWP27754.1    
 H70357_04065   Paenibacillus sp. FSL H7-0357 AIQ15960.1    
 H70357_08210   Paenibacillus sp. FSL H7-0357 AIQ16646.1    
 H70357_18760   Paenibacillus sp. FSL H7-0357 AIQ18513.1    
 H70357_09110   Paenibacillus sp. FSL H7-0357 AIQ16803.1    
 P40081_27720   Paenibacillus sp. FSL P4-0081 AIQ31518.1    
 P40081_26930   Paenibacillus sp. FSL P4-0081 AIQ31392.1    
 P40081_28150   Paenibacillus sp. FSL P4-0081 AIQ31585.1    
 R50912_08660   Paenibacillus sp. FSL R5-0912 AIQ40096.1    
 R70723_23295   Paenibacillus sp. FSL R7-0273 AIQ48514.1    
 R70723_08710   Paenibacillus sp. FSL R7-0273 AIQ45953.1    
 R70331_07585   Paenibacillus sp. FSL R7-0331 AIQ51388.1    
 R70331_22285   Paenibacillus sp. FSL R7-0331 AIQ53992.1    
 E6C60_3336   Paenibacillus sp. HB172198 QCT04047.1    
 α-L-rhamnosidase (Pjdr2_3683) 3.2.1.40 Paenibacillus sp. JDR-2 ACT02314.1 C6D486  
 EI981_07480   Paenibacillus sp. MBLB1234 AZS14314.1    
 GYMC10_3008   Paenibacillus sp. Y412MC10 ACX65274.1    
 GYMC10_2732   Paenibacillus sp. Y412MC10 ACX65003.1    
 GYMC10_2965   Paenibacillus sp. Y412MC10 ACX65235.1    
 HPL003_21870   Paenibacillus terrae HPL-003 AET61102.1    
 BS614_27620   Paenibacillus xylanexedens PAMC 22703 APO47442.1    
 FRZ67_21930   Panacibacter ginsenosidivorans Gsoil1550 QEC70323.1    
 DN0286_27500   Parabacteroides distasonis NBRC 113806 BBK92464.1    
 DN0286_27520   Parabacteroides distasonis NBRC 113806 BBK92466.1    
 AY601_1069   Pedobacter cryoconitis PAMC 27485 AMP97998.1    
 CPT03_14420   Pedobacter ginsengisoli T01R-27 ATP59259.1    
 CPT03_05970   Pedobacter ginsengisoli T01R-27 ATP56036.1    
 Phep_2304   Pedobacter heparinus DSM 2366 ACU04508.1 C6XYM6  
 Phep_3973   Pedobacter heparinus DSM 2366 ACU06164.1 C6XVT9  
 Phep_0942   Pedobacter heparinus DSM 2366 ACU03164.1 C6Y2V1  
 Phep_1578   Pedobacter heparinus DSM 2366 ACU03791.1 C6XU05  
 Phep_2749   Pedobacter heparinus DSM 2366 ACU04950.1 C6Y123  
 Phep_3492   Pedobacter heparinus DSM 2366 ACU05683.1 C6XTA5  
 Phep_3886   Pedobacter heparinus DSM 2366 ACU06077.1 C6XVK2  
 Phep_4096 (fragment)   Pedobacter heparinus DSM 2366 ACU06287.1 C6XWJ8  
 ACU04759.1   Pedobacter heparinus DSM 2366 ACU04759.1    
 FYC62_06655   Pedobacter sp. CJ43 QEK51383.1    
 FYC62_03800   Pedobacter sp. CJ43 QEK53222.1    
 EA772_11735   Pedobacter sp. G11 AZI25980.1    
 EA772_16875   Pedobacter sp. G11 AZI26924.1    
 FFJ24_014045   Pedobacter sp. KBS0701 QDW25882.1    
 FFJ24_008290   Pedobacter sp. KBS0701 QDW24811.1    
 AQ505_21995   Pedobacter sp. PACM 27299 ALL07925.1    
 ING2E5A_2237   Petrimonas mucosa DSM 28695 SCM59048.1    
 ING2E5A_0993   Petrimonas mucosa DSM 28695 SCM56672.1    
 ING2E5A_1841   Petrimonas mucosa DSM 28695 SCM58509.1    
 ING2E5A_1863   Petrimonas mucosa DSM 28695 SCM58561.1    
 ING2E5A_3054   Petrimonas mucosa DSM 28695 SCM59845.1    
 ING2E5A_2061   Petrimonas mucosa DSM 28695 SCM58877.1    
 ING2E5A_2390 (fragment)   Petrimonas mucosa DSM 28695 SCM59192.1    
 ING2E5A_2266   Petrimonas mucosa DSM 28695 SCM59077.1    
 ING2E5A_0912   Petrimonas mucosa DSM 28695 SCM56507.1    
 PEIBARAKI_2122   Petrimonas sp. IBARAKI BBA15995.1
BBD46131.1
   
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