Glycoside Hydrolase Family 106

Activities in Familyα-L-rhamnosidase (EC 3.2.1.40); rhamnogalacturonan α-L-rhamnohydrolase (EC 3.2.1.174)
Mechanism inverting
3D Structure Status( β / α ) 8
Catalytic Nucleophile/BaseNot known
Catalytic Proton DonorNot known
NoteCreated after reading Miyata et al (2005) Curr Microbiol. 51:105-109
External resourcesCAZypedia;
Statistics GenBank accession (989); Uniprot accession (56); PDB accession (4); 3D entries (2); cryst (0)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 DN0286_27520   Parabacteroides distasonis NBRC 113806 BBK92466.1    
 D3H65_18995   Paraflavitalea soli 5GH32-13 AXY75940.1    
 D3H65_00280   Paraflavitalea soli 5GH32-13 AXY72507.1    
 AY601_1069   Pedobacter cryoconitis PAMC 27485 AMP97998.1    
 CPT03_14420   Pedobacter ginsengisoli T01R-27 ATP59259.1    
 CPT03_05970   Pedobacter ginsengisoli T01R-27 ATP56036.1    
 Phep_2304   Pedobacter heparinus DSM 2366 ACU04508.1 C6XYM6  
 Phep_3973   Pedobacter heparinus DSM 2366 ACU06164.1 C6XVT9  
 Phep_0942   Pedobacter heparinus DSM 2366 ACU03164.1 C6Y2V1  
 Phep_1578   Pedobacter heparinus DSM 2366 ACU03791.1 C6XU05  
 Phep_2749   Pedobacter heparinus DSM 2366 ACU04950.1 C6Y123  
 Phep_3492   Pedobacter heparinus DSM 2366 ACU05683.1 C6XTA5  
 Phep_3886   Pedobacter heparinus DSM 2366 ACU06077.1 C6XVK2  
 Phep_4096 (fragment)   Pedobacter heparinus DSM 2366 ACU06287.1 C6XWJ8  
 ACU04759.1   Pedobacter heparinus DSM 2366 ACU04759.1    
 FYC62_06655   Pedobacter sp. CJ43 QEK51383.1    
 FYC62_03800   Pedobacter sp. CJ43 QEK53222.1    
 EA772_11735   Pedobacter sp. G11 AZI25980.1    
 EA772_16875   Pedobacter sp. G11 AZI26924.1    
 G7074_23295   Pedobacter sp. HDW13 QIL41932.1    
 G7074_02605   Pedobacter sp. HDW13 QIL38267.1    
 FFJ24_014045   Pedobacter sp. KBS0701 QDW25882.1    
 FFJ24_008290   Pedobacter sp. KBS0701 QDW24811.1    
 AQ505_21995   Pedobacter sp. PACM 27299 ALL07925.1    
 ING2E5A_2237   Petrimonas mucosa DSM 28695 SCM59048.1    
 ING2E5A_0993   Petrimonas mucosa DSM 28695 SCM56672.1    
 ING2E5A_1841   Petrimonas mucosa DSM 28695 SCM58509.1    
 ING2E5A_1863   Petrimonas mucosa DSM 28695 SCM58561.1    
 ING2E5A_3054   Petrimonas mucosa DSM 28695 SCM59845.1    
 ING2E5A_2061   Petrimonas mucosa DSM 28695 SCM58877.1    
 ING2E5A_2390   Petrimonas mucosa DSM 28695 SCM59192.1    
 ING2E5A_2266   Petrimonas mucosa DSM 28695 SCM59077.1    
 ING2E5A_0912   Petrimonas mucosa DSM 28695 SCM56507.1    
 PEIBARAKI_2122   Petrimonas sp. IBARAKI BBA15995.1
BBD46131.1
   
 PEIBARAKI_1417   Petrimonas sp. IBARAKI BBA15290.1
BBD45426.1
   
 PEIBARAKI_0310   Petrimonas sp. IBARAKI BBA14183.1
BBD44320.1
   
 PEIBARAKI_2117   Petrimonas sp. IBARAKI BBA15990.1
BBD46126.1
   
 PEIBARAKI_0710   Petrimonas sp. IBARAKI BBA14583.1
BBD44720.1
   
 PEIBARAKI_2102   Petrimonas sp. IBARAKI BBA15975.1
BBD46111.1
   
 PEIBARAKI_1895   Petrimonas sp. IBARAKI BBA15768.1
BBD45904.1
   
 PEIBARAKI_2107   Petrimonas sp. IBARAKI BBA15980.1
BBD46116.1
   
 PEIBARAKI_2123 (fragment)   Petrimonas sp. IBARAKI BBA15996.1
BBD46132.1
   
 PEIBARAKI_2319   Petrimonas sp. IBARAKI BBA16192.1
BBD46328.1
   
 PSMK_17850   Phycisphaera mikurensis NBRC 102666 BAM03944.1    
 PLANPX_0436   Planctomycetales bacterium PX69 BBO30824.1    
 K2D_36850   Planctomycetes bacterium K2D QDV80062.1    
 K2D_23010   Planctomycetes bacterium K2D QDV78694.1    
 K2D_06640   Planctomycetes bacterium K2D QDV77077.1    
 MalM25_16600   Planctomycetes bacterium MalM25 QDT68735.1    
 Pan181_24390   Planctomycetes bacterium Pan181 QDU56231.1    
 Pla175_31800   Planctomycetes bacterium Pla175 QDU89785.1    
 Pla175_22940   Planctomycetes bacterium Pla175 QDU88910.1    
 Pla175_23310 (fragment)   Planctomycetes bacterium Pla175 QDU88947.1    
 Poly30_47410   Planctomycetes bacterium Poly30 QDV09184.1    
 Spa11_36460   Planctomycetes bacterium Spa11 QDV75429.1    
 Spa11_06830   Planctomycetes bacterium Spa11 QDV72505.1    
 Spa11_22630   Planctomycetes bacterium Spa11 QDV74064.1    
 BW723_07040   Polaribacter reichenbachii 6Alg 8T APZ46066.1    
 BTO17_15060   Polaribacter reichenbachii KCTC 23969 AUC19928.1    
 BXQ17_09725   Polaribacter sp. BM10 AQS94323.1    
 LPB03_10465   Polaribacter vadi LPB0003 AOW17851.1    
 PKOR_23070   Pontibacter korlensis X14-1T AKD05391.1    
 Prede_1720   Prevotella dentalis DSM 3688 AGB29019.1    
 Prede_1834   Prevotella dentalis DSM 3688 AGB29119.1    
 NCTC13071_02002   Prevotella oris NCTC13071 VEH15986.1    
 PRU_1595   Prevotella ruminicola 23 ADE82941.1 D5ETD9  
 AQPE_0665   Prolixibacteraceae bacterium MeG22 BBE16526.1    
 AQPE_4668   Prolixibacteraceae bacterium MeG22 BBE20475.1    
 GM418_03640   Prolixibacteraceae bacterium WC007 QGY42775.1    
 GM418_03650   Prolixibacteraceae bacterium WC007 QGY42777.1    
 GM418_28240   Prolixibacteraceae bacterium WC007 QGY47416.1    
 GM418_02765   Prolixibacteraceae bacterium WC007 QGY42611.1    
 GM418_16450   Prolixibacteraceae bacterium WC007 QGY45206.1    
 GM418_25475   Prolixibacteraceae bacterium WC007 QGY46887.1    
 GM418_02755   Prolixibacteraceae bacterium WC007 QGY42609.1    
 GM418_07410   Prolixibacteraceae bacterium WC007 QGY43491.1    
 GM418_27055   Prolixibacteraceae bacterium WC007 QGY47190.1    
 GM418_11510   Prolixibacteraceae bacterium WC007 QGY44259.1    
 GM418_22045   Prolixibacteraceae bacterium WC007 QGY46245.1    
 GM418_28785   Prolixibacteraceae bacterium WC007 QGY47522.1    
 G7070_00640   Propioniciclava sp. HDW11 QIK71061.1    
 PSM36_0922   Proteiniphilum saccharofermentans SCD19748.1    
 PSM36_2219   Proteiniphilum saccharofermentans SCD21024.1    
 PSM36_2681   Proteiniphilum saccharofermentans SCD21477.1    
 PSM36_2221   Proteiniphilum saccharofermentans SCD21026.1    
 GCE65_11175   Pseudactinotalea sp. HY158 QGH71057.1    
 GCE65_11165   Pseudactinotalea sp. HY158 QGH70002.1    
 HME7025_00725   Pseudarcicella sp. HME7025 AWL08596.1    
 HME7025_02176   Pseudarcicella sp. HME7025 AWL10024.1    
 Achl_3535   Pseudarthrobacter chlorophenolicus A6 ACL41491.1 B8H6G5  
 SAMN04489743_2056 (fragment)   Pseudarthrobacter equi IMMIB L-1606 SDT22030.1    
 SAMN04489743_2057 (fragment)   Pseudarthrobacter equi IMMIB L-1606 SDT22067.1    
 SAMN04489743_3978   Pseudarthrobacter equi IMMIB L-1606 SDT61693.1    
 CDO33_18065   Pseudoclostridium thermosuccinogenes DSM 5807 AUS98191.1    
 F1602_25295   Pseudomonas putida JYR-1 QEQ90429.1    
 Pedsa_0340   Pseudopedobacter saltans DSM 12145 ADY50922.1    
 Pedsa_3740   Pseudopedobacter saltans DSM 12145 ADY54269.1    
 GSU40_02495   Rathayibacter sp. VKM Ac-2805 QHC72677.1    
 GXP67_22645   Rhodocytophaga sp. 172606-1 QHT69234.1    
 GXP67_01595   Rhodocytophaga sp. 172606-1 QHT65458.1    
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