Glycoside Hydrolase Family 106

Activities in Familyα-L-rhamnosidase (EC 3.2.1.40); rhamnogalacturonan α-L-rhamnohydrolase (EC 3.2.1.174)
Mechanism inverting
3D Structure Status( β / α ) 8
Catalytic Nucleophile/BaseNot known
Catalytic Proton DonorNot known
NoteCreated after reading Miyata et al (2005) Curr Microbiol. 51:105-109
External resourcesCAZypedia;
Statistics GenBank accession (433); Uniprot accession (50); PDB accession (3); 3D entries (1); cryst (0)
| 1 | 2 | 3 | 4 | 5 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 carbohydrate-binding protein   Rhizobium leguminosarum bv. trifolii Rt24.2 AOO88317.1    
 Rleg_6038   Rhizobium leguminosarum bv. trifolii WSM1325 ACS60795.1    
 CHR56_26695   Rhizobium leguminosarum bv. viciae BIHB 1217 ASS58209.1    
 RLV_0756   Rhizobium leguminosarum bv. viciae UPM791 AVC46617.1    
 CUJ84_pRLN4000018   Rhizobium leguminosarum Norway AUW47730.1    
 RTCIAT899_PC08615   Rhizobium tropici CIAT 899 AGB75510.1    
 AWN76_008320   Rhodothermaceae bacterium RA ARA93162.1    
 RB2501_00871   Robiginitalea biformata HTCC2501 EAR14584.1 A4CNW7  
 DC20_01205   Rufibacter tibetensis strain 1351 ALJ01111.1    
 DC20_21455   Rufibacter tibetensis strain 1351 ALJ01752.1    
 DC20_01185   Rufibacter tibetensis strain 1351 ALI97841.1    
 Runsl_0463   Runella slithyformis DSM 19594 AEI46908.1    
 Runsl_2194   Runella slithyformis DSM 19594 AEI48606.1    
 Runsl_2630   Runella slithyformis DSM 19594 AEI49030.1    
 DR864_23165   Runella sp. HYN0085 AXE21699.1    
 DR864_20240   Runella sp. HYN0085 AXE21642.1    
 BWZ22_10515   Seonamhaeicola sp. S2-3 APY12820.1    
 BWZ22_10510 (fragment)   Seonamhaeicola sp. S2-3 APY12819.1    
 BWZ22_10415   Seonamhaeicola sp. S2-3 APY11630.1    
 BWZ22_10275   Seonamhaeicola sp. S2-3 APY11603.1    
 AW14_13530   Siansivirga zeaxanthinifaciens CC-SAMT-1 AJR04520.1    
 AW14_13410   Siansivirga zeaxanthinifaciens CC-SAMT-1 AJR04502.1    
 AW14_13225   Siansivirga zeaxanthinifaciens CC-SAMT-1 AJR04472.1    
 AW14_13650   Siansivirga zeaxanthinifaciens CC-SAMT-1 AJR04529.1    
 AW14_13490   Siansivirga zeaxanthinifaciens CC-SAMT-1 AJR04516.1    
 CA265_13785   Sphingobacteriaceae bacterium GW460-11-11-14-LB5 ARS40670.1    
 CA265_08580   Sphingobacteriaceae bacterium GW460-11-11-14-LB5 ARS39698.1    
 Sph21_0445   Sphingobacterium sp. 21 ADZ77027.1    
 Sph21_0466   Sphingobacterium sp. 21 ADZ77048.1    
 Sph21_0499   Sphingobacterium sp. 21 ADZ77081.1    
 Sph21_2346   Sphingobacterium sp. 21 ADZ78900.1    
 BV902_25635   Sphingobacterium sp. B29 APU99285.1    
 KO02_06710   Sphingobacterium sp. ML3W AIM36426.1    
 BN1088_1433472   Sphingobacterium sp. PM2-P1-29 CDT08311.1    
 EP837_03062   Sphingobium sp. EP60837 ANI79456.1    
 EP837_03665   Sphingobium sp. EP60837 ANI80049.1    
 EP837_02732   Sphingobium sp. EP60837 ANI79126.1    
 BSY17_3627 (fragment)   Sphingobium sp. RAC03 AOF94664.1    
 BSY17_3941   Sphingobium sp. RAC03 AOF95071.1    
 YGS_C1P1627 (fragment)   Sphingobium sp. YG1 BBD00372.1    
 YGS_C1P1626 (fragment)   Sphingobium sp. YG1 BBD00371.1    
 A6768_20240   Sphingobium yanoikuyae S72 ATI82098.1    
 A6768_17455   Sphingobium yanoikuyae S72 ATI81603.1    
 BV87_07990   Sphingobium yanoikuyae SHJ ATP18344.1    
 TS85_22815   Sphingomonas hengshuiensis WHSC-8 AJP74022.1    
 AWL63_03875   Sphingomonas panacis DCY99 AOH83238.1    
 α-L-rhamnosidase (RhaM) 3.2.1.40 Sphingomonas paucimobilis FP2001 / JCM 10661 BAD12237.1 Q76LC4  
 NX02_20265   Sphingomonas sanxanigenens DSM 19645 = NX02 AHE55710.1    
 BRX40_01430   Sphingomonas sp. ABOJV APR51267.1    
 CVN68_12465   Sphingomonas sp. Cra20 ATY32686.1    
 BXU08_00285   Sphingomonas sp. LM7 AQR72311.1    
 MC45_07320   Sphingomonas taxi ATCC 55669 AIT08070.1    
 MC45_07185   Sphingomonas taxi ATCC 55669 AIT06209.1    
 HY78_21065   Sphingomonas wittichii DC-6 ARR55757.1    
 Swit_1100   Sphingomonas wittichii RW1 ABQ67466.1 A5V5A0  
 Slin_0358   Spirosoma linguale DSM 74 ADB36422.1 D2QE67  
 Slin_1224   Spirosoma linguale DSM 74 ADB37274.1 D2QL35  
 Slin_1257   Spirosoma linguale DSM 74 ADB37307.1 D2QL68  
 AWR27_05400   Spirosoma montaniterrae DY10 AQG78808.1    
 SD10_07460   Spirosoma radiotolerans DG5A AKD54767.1    
 CWM47_25455   Spirosoma sp. HA7 AUD04896.1    
 CWM47_11870   Spirosoma sp. HA7 AUD07274.1    
 C5746_06300   Streptomyces atratus SCSIO_ZH16 AXE76588.1    
 BV401_02520   Streptomyces autolyticus CGMCC0516 AQA09525.1    
 SBI_09516   Streptomyces bingchenggensis BCW-1 ADI12634.1    
 SBI_09063   Streptomyces bingchenggensis BCW-1 ADI12181.1 D7C1Y0  
 SCO0370   Streptomyces coelicolor A3(2) CAB55732.1 Q9RJU0  
 SHJG_1652   Streptomyces hygroscopicus subsp. jinggangensis 5008 AEY86927.1    
 SHJGH_1416   Streptomyces hygroscopicus subsp. jinggangensis TL01 AGF61082.1    
 SHL15_0149   Streptomyces hygroscopicus subsp. limoneus KCTC 1717 ALO91360.1    
 SHXM_09382   Streptomyces hygroscopicus XM201 AQW55919.1    
 SIRAN8208   Streptomyces iranensis CDR14040.1    
 SLCG_1014   Streptomyces lincolnensis LC-G AXG52169.1    
 SLCG_1014   Streptomyces lincolnensis LC-G AXG52169.1    
 SLIV_36090   Streptomyces lividans TK24 AIJ18093.1    
 SPRI_6485   Streptomyces pristinaespiralis HCCB 10218 ALC24791.1    
 M271_41370   Streptomyces rapamycinicus NRRL 5491 AGP59651.1    
 CGL27_47715   Streptomyces sp. 11-1-2 ASQ99678.1    
 SAMN05428941_0425   Streptomyces sp. 2114.2 SDS40318.1    
 CXR04_06220   Streptomyces sp. CMB-StM0423 AUH39896.1    
 C1703_03220   Streptomyces sp. Go-475 AXE83996.1    
 CFP59_08831   Streptomyces sp. M56 AUA16640.1    
 DN051_36220   Streptomyces sp. ZFG47 AWW41447.1    
 Strvi_4772   Streptomyces violaceusniger Tu 4113 AEM84335.1    
 C1A40_12910   Tamlana sp. UJ94 AUS06290.1    
 C1A40_12870   Tamlana sp. UJ94 AUS06283.1    
 C1A40_13065   Tamlana sp. UJ94 AUS07342.1    
 TF3313_0630   Tannerella forsythia 3313 BAR48202.1    
 TF3313_0454 (fragment)   Tannerella forsythia 3313 BAR48037.1    
 TF3313_0453   Tannerella forsythia 3313 BAR48036.1    
 BFO_0491   Tannerella forsythia 92A2 ATCC 43037 AEW20432.1    
 BFO_0492   Tannerella forsythia 92A2 ATCC 43037 AEW21098.1    
 BFO_0655   Tannerella forsythia 92A2 ATCC 43037 AEW21961.1    
 TFKS16_0447 (fragment)   Tannerella forsythia KS16 BAR50760.1    
 TFKS16_0595   Tannerella forsythia KS16 BAR50894.1    
 TFKS16_0448   Tannerella forsythia KS16 BAR50761.1    
 BCB71_00590   Tannerella sp. oral taxon HOT-286 str. W11667 AOH39786.1    
 C7123_07965   Tannerella sp. oral taxon HOT-286 W11666 AVV53655.1    
 Terro_1119   Terriglobus roseus DSM 18391 AFL87438.1    
 AciPR4_1713   Terriglobus saanensis SP1PR4 ADV82520.1 E1MXZ6  
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