Glycoside Hydrolase Family 106

Activities in Familyα-L-rhamnosidase (EC 3.2.1.40); rhamnogalacturonan α-L-rhamnohydrolase (EC 3.2.1.174)
Mechanism inverting
3D Structure Status( β / α ) 8
Catalytic Nucleophile/BaseNot known
Catalytic Proton DonorNot known
NoteCreated after reading Miyata et al (2005) Curr Microbiol. 51:105-109
External resourcesCAZypedia;
Statistics GenBank accession (989); Uniprot accession (56); PDB accession (4); 3D entries (2); cryst (0)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 AWN76_008320   Rhodothermaceae bacterium RA ARA93162.1    
 RB2501_00871   Robiginitalea biformata HTCC2501 EAR14584.1 A4CNW7  
 DC20_01205   Rufibacter tibetensis strain 1351 ALJ01111.1    
 DC20_21455   Rufibacter tibetensis strain 1351 ALJ01752.1    
 DC20_01185   Rufibacter tibetensis strain 1351 ALI97841.1    
 Runsl_0463   Runella slithyformis DSM 19594 AEI46908.1    
 Runsl_2194   Runella slithyformis DSM 19594 AEI48606.1    
 Runsl_2630   Runella slithyformis DSM 19594 AEI49030.1    
 DR864_23165   Runella sp. HYN0085 AXE21699.1    
 DR864_20240   Runella sp. HYN0085 AXE21642.1    
 DTQ70_06295   Runella sp. SP2 AYQ31814.1    
 DTQ70_26595 (fragment)   Runella sp. SP2 AYQ35513.1    
 DTQ70_10765   Runella sp. SP2 AYQ32609.1    
 STSP1_00557   Sedimentisphaera salicampi ST-PulAB-D4 ARN56184.1    
 STSP1_02267   Sedimentisphaera salicampi ST-PulAB-D4 ARN57841.1    
 BWZ22_10515   Seonamhaeicola sp. S2-3 APY12820.1    
 BWZ22_10510 (fragment)   Seonamhaeicola sp. S2-3 APY12819.1    
 BWZ22_10415   Seonamhaeicola sp. S2-3 APY11630.1    
 BWZ22_10275   Seonamhaeicola sp. S2-3 APY11603.1    
 AW14_13530   Siansivirga zeaxanthinifaciens CC-SAMT-1 AJR04520.1    
 AW14_13410   Siansivirga zeaxanthinifaciens CC-SAMT-1 AJR04502.1    
 AW14_13225   Siansivirga zeaxanthinifaciens CC-SAMT-1 AJR04472.1    
 AW14_13650   Siansivirga zeaxanthinifaciens CC-SAMT-1 AJR04529.1    
 AW14_13490   Siansivirga zeaxanthinifaciens CC-SAMT-1 AJR04516.1    
 D0B54_18660   Solimonas sp. K1W22B-7 AXQ30580.1    
 D0B54_18650   Solimonas sp. K1W22B-7 AXQ30578.1    
 D0B54_18665   Solimonas sp. K1W22B-7 AXQ30581.1    
 CA265_13785   Sphingobacteriaceae bacterium GW460-11-11-14-LB5 ARS40670.1    
 CA265_08580   Sphingobacteriaceae bacterium GW460-11-11-14-LB5 ARS39698.1    
 Sph21_0445   Sphingobacterium sp. 21 ADZ77027.1    
 Sph21_0466   Sphingobacterium sp. 21 ADZ77048.1    
 Sph21_0499   Sphingobacterium sp. 21 ADZ77081.1    
 Sph21_2346   Sphingobacterium sp. 21 ADZ78900.1    
 BV902_25635   Sphingobacterium sp. B29 APU99285.1    
 GFH32_14740   Sphingobacterium sp. dk4302 QGA28281.1    
 G6053_27595   Sphingobacterium sp. DR205 QIH36398.1    
 G6053_27450   Sphingobacterium sp. DR205 QIH36375.1    
 KO02_06710   Sphingobacterium sp. ML3W AIM36426.1    
 BN1088_1433472   Sphingobacterium sp. PM2-P1-29 CDT08311.1    
 NCTC11429_02157   Sphingobacterium thalpophilum NCTC11429 VTR39295.1    
 NCTC11429_02126   Sphingobacterium thalpophilum NCTC11429 VTR39092.1    
 GL174_19705   Sphingobium sp. CAP-1 QGP81259.1    
 GL174_15075   Sphingobium sp. CAP-1 QGP80456.1    
 GL174_19270   Sphingobium sp. CAP-1 QGP81183.1    
 GL174_02640   Sphingobium sp. CAP-1 QGP78018.1    
 EP837_03062   Sphingobium sp. EP60837 ANI79456.1    
 EP837_03665   Sphingobium sp. EP60837 ANI80049.1    
 EP837_02732   Sphingobium sp. EP60837 ANI79126.1    
 E5554_21965   Sphingobium sp. PAMC28499 QCB40268.1    
 BSY17_3627 (fragment)   Sphingobium sp. RAC03 AOF94664.1    
 BSY17_3941   Sphingobium sp. RAC03 AOF95071.1    
 YGS_C1P1627 (fragment)   Sphingobium sp. YG1 BBD00372.1    
 YGS_C1P1626 (fragment)   Sphingobium sp. YG1 BBD00371.1    
 A6768_20240   Sphingobium yanoikuyae S72 ATI82098.1    
 A6768_17455   Sphingobium yanoikuyae S72 ATI81603.1    
 BV87_07990   Sphingobium yanoikuyae SHJ ATP18344.1    
 EBF16_11295   Sphingobium yanoikuyae SJTF8 AYO77411.1    
 EBF16_17260   Sphingobium yanoikuyae SJTF8 AYO78480.1    
 GS397_16435   Sphingobium yanoikuyae YC-JY1 QHD68477.1    
 HH800_17330   Sphingobium yanoikuyae YC-XJ2 QJR03794.1    
 TS85_22815   Sphingomonas hengshuiensis WHSC-8 AJP74022.1    
 AWL63_03875   Sphingomonas panacis DCY99 AOH83238.1    
 α-L-rhamnosidase (RhaM) 3.2.1.40 Sphingomonas paucimobilis FP2001 / JCM 10661 BAD12237.1 Q76LC4  
 NX02_20265   Sphingomonas sanxanigenens DSM 19645 = NX02 AHE55710.1    
 E2E30_17805   Sphingomonas sp. AAP5 QBM77416.1    
 BRX40_01430   Sphingomonas sp. ABOJV APR51267.1    
 HL653_22360   Sphingomonas sp. AP4-R1 QJU60112.1    
 HL653_11420   Sphingomonas sp. AP4-R1 QJU58311.1    
 HL653_11410   Sphingomonas sp. AP4-R1 QJU58309.1    
 HL653_16235   Sphingomonas sp. AP4-R1 QJU59100.1    
 CVN68_12465   Sphingomonas sp. Cra20 ATY32686.1    
 DM450_12395   Sphingomonas sp. IC081 QDK33554.1    
 DM450_20515   Sphingomonas sp. IC081 QDK35141.1    
 BXU08_00285   Sphingomonas sp. LM7 AQR72311.1    
 MC45_07320   Sphingomonas taxi ATCC 55669 AIT08070.1    
 MC45_07185   Sphingomonas taxi ATCC 55669 AIT06209.1    
 HY78_21065   Sphingomonas wittichii DC-6 ARR55757.1    
 Swit_1100   Sphingomonas wittichii RW1 ABQ67466.1 A5V5A0  
 ETR14_17485   Sphingosinicella sp. BN140058 QAY78116.1    
 Slin_0358   Spirosoma linguale DSM 74 ADB36422.1 D2QE67  
 Slin_1224   Spirosoma linguale DSM 74 ADB37274.1 D2QL35  
 Slin_1257   Spirosoma linguale DSM 74 ADB37307.1 D2QL68  
 AWR27_05400   Spirosoma montaniterrae DY10 AQG78808.1    
 CWM47_25455   Spirosoma pollinicola HA7 AUD04896.1    
 CWM47_11870   Spirosoma pollinicola HA7 AUD07274.1    
 SD10_07460   Spirosoma radiotolerans DG5A AKD54767.1    
 G8759_03615   Spirosoma sp. BT328 QIP17651.1    
 G8759_13295   Spirosoma sp. BT328 QIP13528.1    
 G8759_08390   Spirosoma sp. BT328 QIP12638.1    
 G8759_16555   Spirosoma sp. BT328 QIP14114.1    
 G8759_13745   Spirosoma sp. BT328 QIP13609.1    
 G8759_15610   Spirosoma sp. BT328 QIP13936.1    
 HH216_15115   Spirosoma sp. CJU-R4 QJD79598.1    
 GJR95_08350   Spirosoma sp. I-24 QHV95032.1    
 GJR95_21655   Spirosoma sp. I-24 QHV97447.1    
 GJR95_37780   Spirosoma sp. I-24 QHW00427.1    
 GJR95_19075   Spirosoma sp. I-24 QHV96980.1    
 GJR95_35380   Spirosoma sp. I-24 QHV99977.1    
 GJR95_28035   Spirosoma sp. I-24 QHW01488.1    
 GJR95_06240 (fragment)   Spirosoma sp. I-24 QHV94632.1    
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