Glycoside Hydrolase Family 106

Activities in Familyα-L-rhamnosidase (EC 3.2.1.40); rhamnogalacturonan α-L-rhamnohydrolase (EC 3.2.1.174)
Mechanism inverting
3D Structure Status( β / α ) 8
Catalytic Nucleophile/BaseNot known
Catalytic Proton DonorNot known
NoteCreated after reading Miyata et al (2005) Curr Microbiol. 51:105-109
External resourcesCAZypedia;
Statistics GenBank accession (409); Uniprot accession (50); PDB accession (3); 3D entries (1); cryst (0)
| 1 | 2 | 3 | 4 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 A8C56_09610   Niabella ginsenosidivorans BS26 ANH81204.1    
 A8C56_07095   Niabella ginsenosidivorans BS26 ANH80777.1    
 A8C56_09605   Niabella ginsenosidivorans BS26 ANH83822.1    
 A8C56_21395   Niabella ginsenosidivorans BS26 ANH84122.1    
 A8C56_09665   Niabella ginsenosidivorans BS26 ANH83824.1    
 NIASO_01990   Niabella soli DSM 19437 AHF14289.1    
 NIASO_02000   Niabella soli DSM 19437 AHF14291.1    
 NIASO_02090   Niabella soli DSM 19437 AHF14307.1    
 NIASO_04125   Niabella soli DSM 19437 AHF14591.1    
 NIASO_08155   Niabella soli DSM 19437 AHF15143.1    
 NIASO_10175   Niabella soli DSM 19437 AHF15424.1    
 NIASO_20265   Niabella soli DSM 19437 AHF16888.1    
 Niako_0741   Niastella koreensis GR20-10 AEV97123.1    
 Niako_1916   Niastella koreensis GR20-10 AEV98273.1    
 Niako_2146   Niastella koreensis GR20-10 AEV98501.1    
 Niako_3510   Niastella koreensis GR20-10 AEV99811.1    
 Niako_3585   Niastella koreensis GR20-10 AEV99885.1    
 C0V82_18255   Niveispirillum cyanobacteriorum TH16 AUN32326.1    
 Saro_1727   Novosphingobium aromaticivorans DSM 12444 ABD26167.1 Q2G7K6  
 JI59_20830   Novosphingobium pentaromativorans US6-1 AIT81997.1    
 BES08_00145 (fragment)   Novosphingobium resinovorum SA1 AOR75342.1    
 BES08_23695   Novosphingobium resinovorum SA1 AOR79777.1    
 TQ38_019285   Novosphingobium sp. P6W AXB79883.1    
 TQ38_028535   Novosphingobium sp. P6W AXB80495.1    
 TQ38_028660 (fragment)   Novosphingobium sp. P6W AXB80514.1    
 TQ38_027725   Novosphingobium sp. P6W AXB80360.1    
 PP1Y_Mpl10172   Novosphingobium sp. PP1Y CCA90848.1    
 C7W88_11455   Novosphingobium sp. THN1 AXU20654.1    
 glycoside hydrolase family protein   Ochrobactrum sp. PW1 BBA74477.1    
 OPIT5_17755   Opitutaceae bacterium TAV5 AHF91789.1    
 Oter_1346   Opitutus terrae PB90-1 ACB74631.1 B1ZRE4  
 Oter_2278   Opitutus terrae PB90-1 ACB75560.1 B1ZPV7  
 Oweho_2028   Owenweeksia hongkongensis DSM 17368 AEV33004.1    
 PM3016_4178 (fragment)   Paenibacillus mucilaginosus 3016 AFC30956.1    
 B2K_39700 (fragment)   Paenibacillus mucilaginosus K02 AGN70732.1    
 KNP414_04765 (fragment)   Paenibacillus mucilaginosus KNP414 AEI43295.1    
 AY601_1069   Pedobacter cryoconitis PAMC 27485 AMP97998.1    
 CPT03_14420   Pedobacter ginsengisoli T01R-27 ATP59259.1    
 CPT03_05970   Pedobacter ginsengisoli T01R-27 ATP56036.1    
 Phep_2304   Pedobacter heparinus DSM 2366 ACU04508.1 C6XYM6  
 Phep_3973   Pedobacter heparinus DSM 2366 ACU06164.1 C6XVT9  
 Phep_0942   Pedobacter heparinus DSM 2366 ACU03164.1 C6Y2V1  
 Phep_1578   Pedobacter heparinus DSM 2366 ACU03791.1 C6XU05  
 Phep_2749   Pedobacter heparinus DSM 2366 ACU04950.1 C6Y123  
 Phep_3492   Pedobacter heparinus DSM 2366 ACU05683.1 C6XTA5  
 Phep_3886   Pedobacter heparinus DSM 2366 ACU06077.1 C6XVK2  
 Phep_4096 (fragment)   Pedobacter heparinus DSM 2366 ACU06287.1 C6XWJ8  
 AQ505_21995   Pedobacter sp. PACM 27299 ALL07925.1    
 ING2E5A_2237   Petrimonas mucosa DSM 28695 SCM59048.1    
 ING2E5A_1863   Petrimonas mucosa DSM 28695 SCM58561.1    
 ING2E5A_3054   Petrimonas mucosa DSM 28695 SCM59845.1    
 ING2E5A_2061   Petrimonas mucosa DSM 28695 SCM58877.1    
 ING2E5A_2390 (fragment)   Petrimonas mucosa DSM 28695 SCM59192.1    
 ING2E5A_2266   Petrimonas mucosa DSM 28695 SCM59077.1    
 ING2E5A_0912   Petrimonas mucosa DSM 28695 SCM56507.1    
 PEIBARAKI_2122   Petrimonas sp. IBARAKI BBA15995.1
BBD46131.1
   
 PEIBARAKI_1417   Petrimonas sp. IBARAKI BBA15290.1
BBD45426.1
   
 PEIBARAKI_0310   Petrimonas sp. IBARAKI BBA14183.1
BBD44320.1
   
 PEIBARAKI_0710   Petrimonas sp. IBARAKI BBA14583.1
BBD44720.1
   
 PEIBARAKI_2102   Petrimonas sp. IBARAKI BBA15975.1
BBD46111.1
   
 PEIBARAKI_1895   Petrimonas sp. IBARAKI BBA15768.1
BBD45904.1
   
 PEIBARAKI_2107   Petrimonas sp. IBARAKI BBA15980.1
BBD46116.1
   
 PEIBARAKI_2123 (fragment)   Petrimonas sp. IBARAKI BBA15996.1
BBD46132.1
   
 PEIBARAKI_2319   Petrimonas sp. IBARAKI BBA16192.1
BBD46328.1
   
 SMSP2_00414   Phycisphaerae bacterium SM-Chi-D1 AQQ70075.1    
 SMSP2_02882   Phycisphaerae bacterium SM-Chi-D1 AQQ72496.1    
 STSP2_00961   Phycisphaerae bacterium ST-NAGAB-D1 AQT67811.1    
 STSP1_00557   Phycisphaerae bacterium ST-PulAB-D4 ARN56184.1    
 STSP1_02267   Phycisphaerae bacterium ST-PulAB-D4 ARN57841.1    
 BW723_07040   Polaribacter reichenbachii 6Alg 8T APZ46066.1    
 BTO17_15060   Polaribacter reichenbachii KCTC 23969 AUC19928.1    
 BXQ17_09725   Polaribacter sp. BM10 AQS94323.1    
 LPB03_10465   Polaribacter vadi LPB0003 AOW17851.1    
 PKOR_23070   Pontibacter korlensis X14-1T AKD05391.1    
 Prede_1720   Prevotella dentalis DSM 3688 AGB29019.1    
 Prede_1834   Prevotella dentalis DSM 3688 AGB29119.1    
 PRU_1595   Prevotella ruminicola 23 ADE82941.1 D5ETD9  
 PSM36_0922   Proteiniphilum saccharofermentans SCD19748.1    
 PSM36_2219   Proteiniphilum saccharofermentans SCD21024.1    
 PSM36_2681   Proteiniphilum saccharofermentans SCD21477.1    
 PSM36_2221   Proteiniphilum saccharofermentans SCD21026.1    
 PSM36_0922   Proteiniphilum saccharofermentans SCD19748.1    
 PSM36_2219   Proteiniphilum saccharofermentans SCD21024.1    
 PSM36_2681   Proteiniphilum saccharofermentans SCD21477.1    
 PSM36_2221   Proteiniphilum saccharofermentans SCD21026.1    
 HME7025_00725   Pseudarcicella sp. HME7025 AWL08596.1    
 HME7025_02176   Pseudarcicella sp. HME7025 AWL10024.1    
 Achl_3535   Pseudarthrobacter chlorophenolicus A6 ACL41491.1 B8H6G5  
 SAMN04489743_2056 (fragment)   Pseudarthrobacter equi IMMIB L-1606 SDT22030.1    
 SAMN04489743_2057 (fragment)   Pseudarthrobacter equi IMMIB L-1606 SDT22067.1    
 SAMN04489743_3978   Pseudarthrobacter equi IMMIB L-1606 SDT61693.1    
 Pedsa_0340   Pseudopedobacter saltans DSM 12145 ADY50922.1    
 Pedsa_3740   Pseudopedobacter saltans DSM 12145 ADY54269.1    
 AWN76_008320   Rhodothermaceae bacterium RA ARA93162.1    
 RB2501_00871   Robiginitalea biformata HTCC2501 EAR14584.1 A4CNW7  
 DC20_01205   Rufibacter tibetensis strain 1351 ALJ01111.1    
 DC20_21455   Rufibacter tibetensis strain 1351 ALJ01752.1    
 DC20_01185   Rufibacter tibetensis strain 1351 ALI97841.1    
 Runsl_0463   Runella slithyformis DSM 19594 AEI46908.1    
 Runsl_2194   Runella slithyformis DSM 19594 AEI48606.1    
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