Glycoside Hydrolase Family 106

Activities in Familyα-L-rhamnosidase (EC 3.2.1.40)
Mechanism Not known
3D Structure Status( β / α ) 8
Catalytic Nucleophile/BaseNot known
Catalytic Proton DonorNot known
NoteCreated after reading Miyata et al (2005) Curr Microbiol. 51:105-109
Statistics GenBank accession (318); Uniprot accession (47); PDB accession (3); 3D entries (1); cryst (0)
| 1 | 2 | 3 | 4 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 PEIBARAKI_1417   Petrimonas sp. IBARAKI BBA15290.1    
 PEIBARAKI_0310   Petrimonas sp. IBARAKI BBA14183.1    
 PEIBARAKI_0710   Petrimonas sp. IBARAKI BBA14583.1    
 PEIBARAKI_2102   Petrimonas sp. IBARAKI BBA15975.1    
 PEIBARAKI_1895   Petrimonas sp. IBARAKI BBA15768.1    
 PEIBARAKI_2107   Petrimonas sp. IBARAKI BBA15980.1    
 PEIBARAKI_2123 (fragment)   Petrimonas sp. IBARAKI BBA15996.1    
 SMSP2_00414   Phycisphaerae bacterium SM-Chi-D1 AQQ70075.1    
 SMSP2_02882   Phycisphaerae bacterium SM-Chi-D1 AQQ72496.1    
 STSP2_00961   Phycisphaerae bacterium ST-NAGAB-D1 AQT67811.1    
 STSP1_00557   Phycisphaerae bacterium ST-PulAB-D4 ARN56184.1    
 STSP1_02267   Phycisphaerae bacterium ST-PulAB-D4 ARN57841.1    
 BW723_07040   Polaribacter reichenbachii 6Alg 8T APZ46066.1    
 BXQ17_09725   Polaribacter sp. BM10 AQS94323.1    
 LPB03_10465   Polaribacter vadi LPB0003 AOW17851.1    
 PKOR_23070   Pontibacter korlensis X14-1T AKD05391.1    
 Prede_1720   Prevotella dentalis DSM 3688 AGB29019.1    
 PRU_1595   Prevotella ruminicola 23 ADE82941.1 D5ETD9  
 PSM36_0922   Proteiniphilum saccharofermentans SCD19748.1    
 PSM36_2219   Proteiniphilum saccharofermentans SCD21024.1    
 PSM36_2681   Proteiniphilum saccharofermentans SCD21477.1    
 PSM36_2221   Proteiniphilum saccharofermentans SCD21026.1    
 PSM36_0922   Proteiniphilum saccharofermentans SCD19748.1    
 PSM36_2219   Proteiniphilum saccharofermentans SCD21024.1    
 PSM36_2681   Proteiniphilum saccharofermentans SCD21477.1    
 PSM36_2221   Proteiniphilum saccharofermentans SCD21026.1    
 Achl_3535   Pseudarthrobacter chlorophenolicus A6 ACL41491.1 B8H6G5  
 SAMN04489743_2056 (fragment)   Pseudarthrobacter equi IMMIB L-1606 SDT22030.1    
 SAMN04489743_2057 (fragment)   Pseudarthrobacter equi IMMIB L-1606 SDT22067.1    
 SAMN04489743_3978   Pseudarthrobacter equi IMMIB L-1606 SDT61693.1    
 Pedsa_0340   Pseudopedobacter saltans DSM 12145 ADY50922.1    
 Pedsa_3740   Pseudopedobacter saltans DSM 12145 ADY54269.1    
 AWN76_008320   Rhodothermaceae bacterium RA ARA93162.1    
 RB2501_00871   Robiginitalea biformata HTCC2501 EAR14584.1 A4CNW7  
 DC20_01205   Rufibacter tibetensis strain 1351 ALJ01111.1    
 DC20_21455   Rufibacter tibetensis strain 1351 ALJ01752.1    
 DC20_01185   Rufibacter tibetensis strain 1351 ALI97841.1    
 Runsl_0463   Runella slithyformis DSM 19594 AEI46908.1    
 Runsl_2194   Runella slithyformis DSM 19594 AEI48606.1    
 Runsl_2630   Runella slithyformis DSM 19594 AEI49030.1    
 BWZ22_10515   Seonamhaeicola sp. S2-3 APY12820.1    
 BWZ22_10510 (fragment)   Seonamhaeicola sp. S2-3 APY12819.1    
 BWZ22_10415   Seonamhaeicola sp. S2-3 APY11630.1    
 BWZ22_10275   Seonamhaeicola sp. S2-3 APY11603.1    
 AW14_13530   Siansivirga zeaxanthinifaciens CC-SAMT-1 AJR04520.1    
 AW14_13410   Siansivirga zeaxanthinifaciens CC-SAMT-1 AJR04502.1    
 AW14_13225   Siansivirga zeaxanthinifaciens CC-SAMT-1 AJR04472.1    
 AW14_13650   Siansivirga zeaxanthinifaciens CC-SAMT-1 AJR04529.1    
 AW14_13490   Siansivirga zeaxanthinifaciens CC-SAMT-1 AJR04516.1    
 CA265_13785   Sphingobacteriaceae bacterium GW460-11-11-14-LB5 ARS40670.1    
 CA265_08580   Sphingobacteriaceae bacterium GW460-11-11-14-LB5 ARS39698.1    
 Sph21_0445   Sphingobacterium sp. 21 ADZ77027.1    
 Sph21_0466   Sphingobacterium sp. 21 ADZ77048.1    
 Sph21_0499   Sphingobacterium sp. 21 ADZ77081.1    
 Sph21_2346   Sphingobacterium sp. 21 ADZ78900.1    
 BV902_25635   Sphingobacterium sp. B29 APU99285.1    
 KO02_06710   Sphingobacterium sp. ML3W AIM36426.1    
 BN1088_1433472   Sphingobacterium sp. PM2-P1-29 CDT08311.1    
 EP837_03062   Sphingobium sp. EP60837 ANI79456.1    
 EP837_03665   Sphingobium sp. EP60837 ANI80049.1    
 BSY17_3627 (fragment)   Sphingobium sp. RAC03 AOF94664.1    
 BSY17_3941   Sphingobium sp. RAC03 AOF95071.1    
 A6768_20240   Sphingobium yanoikuyae S72 ATI82098.1    
 A6768_17455   Sphingobium yanoikuyae S72 ATI81603.1    
 BV87_07990   Sphingobium yanoikuyae SHJ ATP18344.1    
 TS85_22815   Sphingomonas hengshuiensis WHSC-8 AJP74022.1    
 AWL63_03875   Sphingomonas panacis DCY99 AOH83238.1    
 α-L-rhamnosidase (RhaM) 3.2.1.40 Sphingomonas paucimobilis FP2001 / JCM 10661 BAD12237.1 Q76LC4  
 NX02_20265   Sphingomonas sanxanigenens DSM 19645 = NX02 AHE55710.1    
 BRX40_01430   Sphingomonas sp. ABOJV APR51267.1    
 BXU08_00285   Sphingomonas sp. LM7 AQR72311.1    
 MC45_07320   Sphingomonas taxi ATCC 55669 AIT08070.1    
 MC45_07185   Sphingomonas taxi ATCC 55669 AIT06209.1    
 Slin_0358   Spirosoma linguale DSM 74 ADB36422.1 D2QE67  
 Slin_1224   Spirosoma linguale DSM 74 ADB37274.1 D2QL35  
 Slin_1257   Spirosoma linguale DSM 74 ADB37307.1 D2QL68  
 AWR27_05400   Spirosoma montaniterrae DY10 AQG78808.1    
 SD10_07460   Spirosoma radiotolerans DG5A AKD54767.1    
 SBI_09063   Streptomyces bingchenggensis BCW-1 ADI12181.1 D7C1Y0  
 SCO0370   Streptomyces coelicolor A3(2) CAB55732.1 Q9RJU0  
 SLIV_36090   Streptomyces lividans TK24 AIJ18093.1    
 SPRI_6485   Streptomyces pristinaespiralis HCCB 10218 ALC24791.1    
 SAMN05428941_0425   Streptomyces sp. 2114.2 SDS40318.1    
 TF3313_0630   Tannerella forsythia 3313 BAR48202.1    
 TF3313_0454 (fragment)   Tannerella forsythia 3313 BAR48037.1    
 TF3313_0453   Tannerella forsythia 3313 BAR48036.1    
 BFO_0491   Tannerella forsythia 92A2 ATCC 43037 AEW20432.1    
 BFO_0492   Tannerella forsythia 92A2 ATCC 43037 AEW21098.1    
 BFO_0655   Tannerella forsythia 92A2 ATCC 43037 AEW21961.1    
 TFKS16_0447 (fragment)   Tannerella forsythia KS16 BAR50760.1    
 TFKS16_0595   Tannerella forsythia KS16 BAR50894.1    
 TFKS16_0448   Tannerella forsythia KS16 BAR50761.1    
 BCB71_00590   Tannerella sp. oral taxon HOT-286 str. W11667 AOH39786.1    
 Terro_1119   Terriglobus roseus DSM 18391 AFL87438.1    
 AciPR4_1713   Terriglobus saanensis SP1PR4 ADV82520.1 E1MXZ6  
 AciPR4_2642   Terriglobus saanensis SP1PR4 ADV83420.1 E1N0A7  
 AciPR4_2236   Terriglobus saanensis SP1PR4 ADV83038.1 E1N6F4  
 THTE_1080   Thermogutta terrifontis R1 ASV73682.1    
 THTE_4390   Thermogutta terrifontis R1 ASV76991.1    
 THTE_0913   Thermogutta terrifontis R1 ASV73515.1    
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