Glycoside Hydrolase Family 106

Activities in Familyα-L-rhamnosidase (EC 3.2.1.40); rhamnogalacturonan α-L-rhamnohydrolase (EC 3.2.1.174)
Mechanism inverting
3D Structure Status( β / α ) 8
Catalytic Nucleophile/BaseNot known
Catalytic Proton DonorNot known
NoteCreated after reading Miyata et al (2005) Curr Microbiol. 51:105-109
External resourcesCAZypedia;
Statistics GenBank accession (384); Uniprot accession (48); PDB accession (3); 3D entries (1); cryst (0)
| 1 | 2 | 3 | 4 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 Cycma_2351   Cyclobacterium marinum DSM 745 AEL26093.1    
 SAMN06298216_3572   Cytophagales bacterium TFI 002 SOE23181.1    
 SAMN06298216_3426   Cytophagales bacterium TFI 002 SOE23034.1    
 Dfer_1521   Dyadobacter fermentans DSM 18053 ACT92766.1 C6VRR3  
 Dfer_2269   Dyadobacter fermentans DSM 18053 ACT93491.1 C6VZL3  
 Dfer_2290   Dyadobacter fermentans DSM 18053 ACT93511.1 C6VZN3  
 Dfer_3461   Dyadobacter fermentans DSM 18053 ACT94671.1 C6VT26  
 DN752_14400   Echinicola strongylocentroti MEBiC08714 AWW31217.1    
 DN752_14010   Echinicola strongylocentroti MEBiC08714 AWW31152.1    
 DN752_00150   Echinicola strongylocentroti MEBiC08714 AWW28678.1    
 DN752_01235   Echinicola strongylocentroti MEBiC08714 AWW28862.1    
 DN752_01245   Echinicola strongylocentroti MEBiC08714 AWW28864.1    
 Echvi_1619   Echinicola vietnamensis DSM 17526 AGA77884.1    
 Echvi_1699   Echinicola vietnamensis DSM 17526 AGA77964.1    
 Emtol_2460   Emticicia oligotrophica DSM 17448 AFK03596.1    
 CKA38_13305 (fragment)   Ereboglobus luteus Ho45 AWI10103.1    
 CKA38_09610   Ereboglobus luteus Ho45 AWI09469.1    
 CKA38_09510   Ereboglobus luteus Ho45 AWI09450.1    
 CKA38_10310   Ereboglobus luteus Ho45 AWI09583.1    
 CKA38_13300 (fragment)   Ereboglobus luteus Ho45 AWI10102.1    
 CKA38_10770   Ereboglobus luteus Ho45 AWI09668.1    
 CKA38_10305   Ereboglobus luteus Ho45 AWI09582.1    
 CKA38_09575   Ereboglobus luteus Ho45 AWI09462.1    
 CKA38_02975   Ereboglobus luteus Ho45 AWI08357.1    
 CKA38_10320   Ereboglobus luteus Ho45 AWI09585.1    
 CKA38_11130   Ereboglobus luteus Ho45 AWI09730.1    
 FAES_2943 (fragment)   Fibrella aestuarina BUZ 2 CCH00952.1    
 A6C57_12750   Fibrella sp. ES10-3-2-2 ARK11122.1    
 A6C57_10625   Fibrella sp. ES10-3-2-2 ARK13601.1    
 FLA_1148   Filimonas lacunae NBRC 104114 BAV05141.1    
 FLA_4045   Filimonas lacunae NBRC 104114 BAV08012.1    
 FLA_4006   Filimonas lacunae NBRC 104114 BAV07974.1    
 OP10G_0527   Fimbriimonas ginsengisoli Gsoil 348 AIE83895.1    
 OP10G_0590   Fimbriimonas ginsengisoli Gsoil 348 AIE83958.1    
 D770_14585   Flammeovirgaceae bacterium 311 AHM61171.1    
 BIW12_04735   Flavobacterium commune PK15 AOZ98793.1    
 BIW12_07065   Flavobacterium commune PK15 AOZ99223.1    
 EM308_01460   Flavobacterium gilvum EM1308 AOW11205.1    
 EM308_15870   Flavobacterium gilvum EM1308 AOW10844.1    
 EM308_10885   Flavobacterium gilvum EM1308 AOW09974.1    
 BB050_03329   Flavobacterium johnsoniae GSE09 AOC96418.1    
 Fjoh_4101   Flavobacterium johnsoniae UW101 ABQ07109.1 A5FCG3  
 Fjoh_4235   Flavobacterium johnsoniae UW101 ABQ07243.1 A5FC22  
 HYN56_19710   Flavobacterium sp. HYN0056 AWK06330.1    
 HYN56_20395   Flavobacterium sp. HYN0056 AWK06454.1    
 α-L-rhamnosidase (BN863_22040) 3.2.1.40 Formosa agariphila KMM 3901 CDF79916.1    
 SAMN04488543_2058 (fragment)   Friedmanniella luteola DSM 21741 SDS61381.1    
 J421_5645   Gemmatirosa kalamazoonesis KBS708 AHG93180.1    
 A0U94_10365   Gluconobacter albidus TMW2.1191 AQS91324.1    
 GRFL_1592   Gramella flava JLT2011 APU68316.1    
 GRFL_1425   Gramella flava JLT2011 APU68149.1    
 C7S20_10170   Gramella sp. SH35 AVR45602.1    
 AciX8_0881   Granulicella mallensis MP5ACTX8 AEU35230.1    
 AciX8_2301   Granulicella mallensis MP5ACTX8 AEU36619.1    
 AciX9_1210   Granulicella tundricola MP5ACTX9 ADW68273.1    
 Halhy_3514   Haliscomenobacter hydrossis DSM 1100 AEE51369.1    
 Halhy_4359   Haliscomenobacter hydrossis DSM 1100 AEE52203.1    
 AUC43_09255   Hymenobacter sedentarius DG5B ALW85267.1    
 SAMN04488563_6287   Jiangella alkaliphila DSM 45079 SDU81219.1    
 L21SP4_02405   Kiritimatiella glycovorans L21-Fru-AB AKJ65630.1    
 L21SP4_02248   Kiritimatiella glycovorans L21-Fru-AB AKJ65475.1    
 L21SP4_00529 (fragment)   Kiritimatiella glycovorans L21-Fru-AB AKJ63801.1    
 L21SP4_00318   Kiritimatiella glycovorans L21-Fru-AB AKJ63599.1    
 L21SP4_00410   Kiritimatiella glycovorans L21-Fru-AB AKJ63690.1    
 L21SP4_00910   Kiritimatiella glycovorans L21-Fru-AB AKJ64173.1    
 Verru16b_01271   Lacunisphaera limnophila IG16b AOS44210.1    
 Verru16b_02782   Lacunisphaera limnophila IG16b AOS45695.1    
 Lbys_2350   Leadbetterella byssophila DSM 17132 ADQ18026.1 E4RWF3  
 AM586_03255   Massilia sp. WG5 ALK95455.1    
 AM586_03125   Massilia sp. WG5 ALK95435.1    
 MROS_0084   Melioribacter roseus P3M-2 AFN73328.1    
 MTES_1718   Microbacterium testaceum StLB037 BAJ74682.1    
 SAMN04489812_5883   Microlunatus soli DSM 21800 SDT44491.1    
 MODMU_2752   Modestobacter marinus BC501 CCH88181.1    
 MgSA37_03914   Mucilaginibacter gotjawali SA3-7 BAU55722.1    
 MgSA37_00858   Mucilaginibacter gotjawali SA3-7 BAU52696.1    
 MgSA37_04399   Mucilaginibacter gotjawali SA3-7 BAU56202.1    
 SAMN05216490_2580   Mucilaginibacter mallensis MP1X4 SDT14258.1    
 SAMN05216490_2632   Mucilaginibacter mallensis MP1X4 SDT16467.1    
 SAMN05216490_0126   Mucilaginibacter mallensis MP1X4 SDR88385.1    
 SAMN05216490_3078   Mucilaginibacter mallensis MP1X4 SDT32019.1    
 MuYL_4478   Mucilaginibacter sp. BJC16-A31 ASU36363.1    
 MuYL_4374   Mucilaginibacter sp. BJC16-A31 ASU36259.1    
 MuYL_2837   Mucilaginibacter sp. BJC16-A31 ASU34724.1    
 A0256_07430   Mucilaginibacter sp. PAMC 26640 AMR34463.1    
 A0256_04925   Mucilaginibacter sp. PAMC 26640 AMR30812.1    
 A0256_09600   Mucilaginibacter sp. PAMC 26640 AMR31659.1    
 A8C56_07100   Niabella ginsenosidivorans BS26 ANH80778.1    
 A8C56_04295   Niabella ginsenosidivorans BS26 ANH80300.1    
 A8C56_04075   Niabella ginsenosidivorans BS26 ANH80269.1    
 A8C56_09610   Niabella ginsenosidivorans BS26 ANH81204.1    
 A8C56_07095   Niabella ginsenosidivorans BS26 ANH80777.1    
 A8C56_09605   Niabella ginsenosidivorans BS26 ANH83822.1    
 A8C56_21395   Niabella ginsenosidivorans BS26 ANH84122.1    
 A8C56_09665   Niabella ginsenosidivorans BS26 ANH83824.1    
 NIASO_01990   Niabella soli DSM 19437 AHF14289.1    
 NIASO_02000   Niabella soli DSM 19437 AHF14291.1    
 NIASO_02090   Niabella soli DSM 19437 AHF14307.1    
 NIASO_04125   Niabella soli DSM 19437 AHF14591.1    
 NIASO_08155   Niabella soli DSM 19437 AHF15143.1    
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