Glycoside Hydrolase Family 106

Activities in Familyα-L-rhamnosidase (EC 3.2.1.40)
Mechanism Not known
3D Structure Status( β / α ) 8
Catalytic Nucleophile/BaseNot known
Catalytic Proton DonorNot known
NoteCreated after reading Miyata et al (2005) Curr Microbiol. 51:105-109
Statistics GenBank accession (315); Uniprot accession (47); PDB accession (3); 3D entries (1); cryst (0)
| 1 | 2 | 3 | 4 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 LuPra_04577   Acidobacteria bacterium DSM 100886 AMY11327.1    
 ACP_0553   Acidobacterium capsulatum ATCC 51196 ACO34217.1 C1F149  
 ACP_0775   Acidobacterium capsulatum ATCC 51196 ACO34516.1 C1F2B3  
 AMIS_43710   Actinoplanes missouriensis 431 BAL89591.1    
 SAMN04489717_3842   Actinopolymorpha singaporensis DSM 22024 SDS77969.1    
 SAMN04489721_0702   Agromyces flavus CPCC 202695 SDS05577.1    
 APS56_04775   Algibacter alginicilyticus HZ22 ALJ04495.1    
 CDL62_02055   Alkalitalea saponilacus DSM 24412 ASB48013.1    
 B737_3621   Amycolatopsis mediterranei RB AGT84285.1    
 RAM_29540 (fragment)   Amycolatopsis mediterranei S699 AEK44383.1    
 AMES_3621 (RAM_18640)   Amycolatopsis mediterranei S699 AEK42214.1
AFO77157.1
   
 AMED_3662   Amycolatopsis mediterranei U32 ADJ45445.1 D8I8V7  
 A9P82_10315   Arachidicoccus sp. BS20 ANI89646.1    
 AREALGSMS7_03053   Arenibacter algicola SMS7 ASO06484.1    
 AREALGSMS7_01663   Arenibacter algicola SMS7 ASO05130.1    
 AREALGSMS7_03054   Arenibacter algicola SMS7 ASO06485.1    
 AREALGSMS7_03051   Arenibacter algicola SMS7 ASO06482.1    
 AREALGSMS7_02887   Arenibacter algicola SMS7 ASO06321.1    
 SAMN04489747_1823   Auraticoccus monumenti MON 2.2 SDD82172.1    
 CGC64_02685   Bacteroides caccae ATCC 43185 ASM64969.1    
 A4V03_02245   Bacteroides caecimuris I48 ANU56532.1    
 BcellWH2_02090   Bacteroides cellulosilyticus WH2 ALJ59333.1    
 BcellWH2_03513   Bacteroides cellulosilyticus WH2 ALJ60736.1    
 BcellWH2_03143   Bacteroides cellulosilyticus WH2 ALJ60380.1    
 BcellWH2_04891   Bacteroides cellulosilyticus WH2 ALJ62100.1    
 BcellWH2_03514   Bacteroides cellulosilyticus WH2 ALJ60737.1    
 ABI39_13525   Bacteroides dorei CL03T12C01 AND20307.1    
 ABI39_08965   Bacteroides dorei CL03T12C01 AND19528.1    
 ABI39_00605   Bacteroides dorei CL03T12C01 AND18137.1    
 ABI39_01030   Bacteroides dorei CL03T12C01 AND18210.1    
 ABI39_00885   Bacteroides dorei CL03T12C01 AND18185.1    
 EL88_06515   Bacteroides dorei isolate HS1_L1_B_010 AII62838.1    
 EL88_16950   Bacteroides dorei isolate HS1_L1_B_010 AII64737.1    
 EL88_17065   Bacteroides dorei isolate HS1_L1_B_010 AII64758.1    
 EL88_19330   Bacteroides dorei isolate HS1_L1_B_010 AII65174.1    
 GV66_01105   Bacteroides dorei isolate HS1_L3_B_079 AII66397.1    
 GV66_14425   Bacteroides dorei isolate HS1_L3_B_079 AII68823.1    
 GV66_00960   Bacteroides dorei isolate HS1_L3_B_079 AII66369.1    
 GV66_00650   Bacteroides dorei isolate HS1_L3_B_079 AII66314.1    
 GV66_09115   Bacteroides dorei isolate HS1_L3_B_079 AII67845.1    
 IY41_00615   Bacteroides dorei isolate HS2_L_2_B_045b ALA72159.1    
 IY41_01050   Bacteroides dorei isolate HS2_L_2_B_045b ALA72232.1    
 IY41_09090   Bacteroides dorei isolate HS2_L_2_B_045b ALA73600.1    
 IY41_00905   Bacteroides dorei isolate HS2_L_2_B_045b ALA75940.1    
 IY41_14850   Bacteroides dorei isolate HS2_L_2_B_045b ALA74607.1    
 BACOVA_02699 (23740)   Bacteroides ovatus ATCC 8483 EDO11490.1
ZP_02065713.1
A7LXY3  
 Bovatus_03109   Bacteroides ovatus ATCC 8483 ALJ47717.1    
 Bovatus_00676   Bacteroides ovatus ATCC 8483 ALJ45342.1    
 Bovatus_04395   Bacteroides ovatus ATCC 8483 ALJ48988.1    
 Bovatus_02293   Bacteroides ovatus ATCC 8483 ALJ46926.1    
 BACOV975_02195   Bacteroides ovatus V975 SCV08407.1    
 BACOV975_03471   Bacteroides ovatus V975 SCV09677.1    
 BACOV975_00081   Bacteroides ovatus V975 SCV06333.1    
 BACOV975_00872   Bacteroides ovatus V975 SCV07115.1    
 Bacsa_3004   Bacteroides salanitronis DSM 18170 ADY37533.1    
 Bacsa_2324 (fragment)   Bacteroides salanitronis DSM 18170 ADY36872.1    
 Bacsa_2325 (fragment)   Bacteroides salanitronis DSM 18170 ADY36873.1    
 Btheta7330_03966   Bacteroides thetaiotaomicron 7330 ALJ43494.1    
 Btheta7330_02599   Bacteroides thetaiotaomicron 7330 ALJ42141.1    
 BT2912   Bacteroides thetaiotaomicron VPI-5482 AAO78018.1
NP_811824.1
Q8A3P2  
 endo-α-L-1,3-rhamnosidase (BT0986;BT_0986) 3.2.1.- Bacteroides thetaiotaomicron VPI-5482 AAO76093.1 Q8A931 5MQM[A]
5MQN[A]
5MWK[A]
 BT4145   Bacteroides thetaiotaomicron VPI-5482 AAO79250.1 Q8A076  
 BVU_0163   Bacteroides vulgatus ATCC 8482 ABR37891.1 A6KWS7  
 BVU_0187   Bacteroides vulgatus ATCC 8482 ABR37915.1 A6KWV1  
 BVU_2696   Bacteroides vulgatus ATCC 8482 ABR40348.1 A6L3T4  
 BvMPK_2387   Bacteroides vulgatus mpk ALK84984.1    
 BvMPK_3889   Bacteroides vulgatus mpk ALK86447.1    
 BvMPK_3868   Bacteroides vulgatus mpk ALK86426.1    
 BXY_31700   Bacteroides xylanisolvens XB1A CBK68178.1 D6D176  
 BXY_04080   Bacteroides xylanisolvens XB1A CBK65666.1 D6D618  
 BXY_32120   Bacteroides xylanisolvens XB1A CBK68219.1 D6D1B7  
 Bfae_29680   Brachybacterium faecium DSM 4810 ACU86729.1 C7MA59  
 CFK41_01315   Brachybacterium ginsengisoli DCY80 ATG53568.1    
 BH708_11840   Brachybacterium sp. P6-10-X1 APX33285.1    
 Acid_5957   Candidatus Solibacter usitatus Ellin6076 ABJ86898.1 Q01TX2  
 Cseg_1776   Caulobacter segnis ATCC 21756 ADG10252.1 D5VGD3  
 Cpin_3297   Chitinophaga pinensis DSM 2588 ACU60764.1 C7PRX0  
 Cpin_1809   Chitinophaga pinensis DSM 2588 ACU59305.1 C7PA68  
 ATE47_05915   Chryseobacterium sp. IHB B 17019 ALR32507.1    
 A0O34_16015   Chryseobacterium sp. IHBB 10212 ANF51923.1    
 CEY12_07885   Chryseobacterium sp. T16E-39 ASK30034.1    
 A9D14_15855   Croceicoccus marinus E4A9 ARU18144.1    
 CA2015_2294   Cyclobacterium amurskyense KCTC 12363 AKP51712.1    
 CA2015_2246   Cyclobacterium amurskyense KCTC 12363 AKP51666.1    
 Cycma_2306   Cyclobacterium marinum DSM 745 AEL26048.1    
 Cycma_2351   Cyclobacterium marinum DSM 745 AEL26093.1    
 SAMN06298216_3572   Cytophagales bacterium TFI 002 SOE23181.1    
 Dfer_1521   Dyadobacter fermentans DSM 18053 ACT92766.1 C6VRR3  
 Dfer_2269   Dyadobacter fermentans DSM 18053 ACT93491.1 C6VZL3  
 Dfer_2290   Dyadobacter fermentans DSM 18053 ACT93511.1 C6VZN3  
 Dfer_3461   Dyadobacter fermentans DSM 18053 ACT94671.1 C6VT26  
 Echvi_1619   Echinicola vietnamensis DSM 17526 AGA77884.1    
 Echvi_1699   Echinicola vietnamensis DSM 17526 AGA77964.1    
 Emtol_2460   Emticicia oligotrophica DSM 17448 AFK03596.1    
 FAES_2943 (fragment)   Fibrella aestuarina BUZ 2 CCH00952.1    
 A6C57_12750   Fibrella sp. ES10-3-2-2 ARK11122.1    
 A6C57_10625   Fibrella sp. ES10-3-2-2 ARK13601.1    
 FLA_1148   Filimonas lacunae NBRC 104114 BAV05141.1    
 FLA_4045   Filimonas lacunae NBRC 104114 BAV08012.1    
 FLA_4006   Filimonas lacunae NBRC 104114 BAV07974.1    
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