Glycoside Hydrolase Family 106

Activities in Familyα-L-rhamnosidase (EC 3.2.1.40); rhamnogalacturonan α-L-rhamnohydrolase (EC 3.2.1.174)
Mechanism inverting
3D Structure Status( β / α ) 8
Catalytic Nucleophile/BaseNot known
Catalytic Proton DonorNot known
NoteCreated after reading Miyata et al (2005) Curr Microbiol. 51:105-109
External resourcesCAZypedia;
Statistics GenBank accession (687); Uniprot accession (57); PDB accession (3); 3D entries (1); cryst (0)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 LuPra_04577   Acidobacteria bacterium DSM 100886 AMY11327.1    
 ACPOL_3249   Acidobacteriaceae bacterium SBC82 AXC12542.1    
 ACPOL_5705   Acidobacteriaceae bacterium SBC82 AXC14951.1    
 ACPOL_5700   Acidobacteriaceae bacterium SBC82 AXC14946.1    
 ACPOL_0937   Acidobacteriaceae bacterium SBC82 AXC10290.1    
 ACP_0553   Acidobacterium capsulatum ATCC 51196 ACO34217.1 C1F149  
 ACP_0775   Acidobacterium capsulatum ATCC 51196 ACO34516.1 C1F2B3  
 NCTC11636_01970   Actinomyces howellii NCTC11636 VEG29282.1    
 AMIS_43710   Actinoplanes missouriensis 431 BAL89591.1    
 AMIS_43720   Actinoplanes missouriensis 431 BAL89592.1    
 ACTI_61100   Actinoplanes sp. OR16 BBH69425.1    
 ACTI_58840   Actinoplanes sp. OR16 BBH69199.1    
 SAMN04489717_3842 (fragment)   Actinopolymorpha singaporensis DSM 22024 SDS77969.1    
 ADH66_11860   Acutalibacter muris KB18 ASB41290.1    
 ADH66_05105   Acutalibacter muris KB18 ASB40092.1    
 SAMN04489721_0702   Agromyces flavus CPCC 202695 SDS05577.1    
 APS56_04775   Algibacter alginicilyticus HZ22 ALJ04495.1    
 CDL62_02055   Alkalitalea saponilacus DSM 24412 ASB48013.1    
 ALT761_04130   Alteromonas sp. 76-1 VEM00341.1    
 ALT761_04148   Alteromonas sp. 76-1 VEM00360.1    
 DS731_01100   Alteromonas sp. RKMC-009 AYA62710.1    
 DS731_01455   Alteromonas sp. RKMC-009 AYA62778.1    
 A4R43_03820   Amycolatopsis albispora WP1 AXB41756.1    
 B737_5699 (fragment)   Amycolatopsis mediterranei RB AGT86363.1    
 RAM_29540 (fragment)   Amycolatopsis mediterranei S699 AEK44383.1    
 AMES_3621 (RAM_18640)   Amycolatopsis mediterranei S699 AEK42214.1
AFO77157.1
   
 AMES_5699 (fragment)   Amycolatopsis mediterranei S699 AFO79235.1    
 AMETH_6745   Amycolatopsis methanolica 239 AIJ26837.1    
 A9P82_10315   Arachidicoccus sp. BS20 ANI89646.1    
 D6B99_07765   Arachidicoccus sp. KIS59-12 AYD49341.1    
 D6B99_12145   Arachidicoccus sp. KIS59-12 AYD48286.1    
 D6B99_08535   Arachidicoccus sp. KIS59-12 AYD47649.1    
 DJ013_14615   Arcticibacterium luteifluviistationis SM1504 AWV99328.1    
 AREALGSMS7_03053   Arenibacter algicola SMS7 ASO06484.1    
 AREALGSMS7_01663   Arenibacter algicola SMS7 ASO05130.1    
 AREALGSMS7_03054   Arenibacter algicola SMS7 ASO06485.1    
 AREALGSMS7_03051   Arenibacter algicola SMS7 ASO06482.1    
 AREALGSMS7_02887   Arenibacter algicola SMS7 ASO06321.1    
 C3B78_00240   Arthrobacter sp. PGP41 AUZ36428.1    
 SAMN04489747_1823   Auraticoccus monumenti MON 2.2 SDD82172.1    
 C2I06_23615   Bacillus circulans PK3_109 AYV69582.1    
 C2I06_03980   Bacillus circulans PK3_109 AYV66103.1    
 C2H98_10730   Bacillus circulans PK3_138 AYV72028.1    
 C2H98_05540   Bacillus circulans PK3_138 AYV71078.1    
 BC8716_21425   Bacillus clausii DSM 8716 AST98361.1    
 NCTC4824_04130   Bacillus lentus NCTC4824 SQI63478.1    
 DOE78_13730 (fragment)   Bacillus sp. Y1 AYA76417.1    
 CGC64_02685   Bacteroides caccae ATCC 43185 ASM64969.1    
 A4V03_02245   Bacteroides caecimuris I48 ANU56532.1    
 BcellWH2_02090   Bacteroides cellulosilyticus WH2 ALJ59333.1    
 BcellWH2_03513   Bacteroides cellulosilyticus WH2 ALJ60736.1    
 BcellWH2_03143   Bacteroides cellulosilyticus WH2 ALJ60380.1    
 BcellWH2_04891   Bacteroides cellulosilyticus WH2 ALJ62100.1    
 BcellWH2_02276   Bacteroides cellulosilyticus WH2 ALJ59516.1    
 BcellWH2_03514   Bacteroides cellulosilyticus WH2 ALJ60737.1    
 ABI39_13525   Bacteroides dorei CL03T12C01 AND20307.1    
 ABI39_00980   Bacteroides dorei CL03T12C01 AND18200.1    
 ABI39_08965   Bacteroides dorei CL03T12C01 AND19528.1    
 ABI39_00605   Bacteroides dorei CL03T12C01 AND18137.1    
 ABI39_01030   Bacteroides dorei CL03T12C01 AND18210.1    
 ABI39_00885   Bacteroides dorei CL03T12C01 AND18185.1    
 EL88_06515   Bacteroides dorei isolate HS1_L1_B_010 AII62838.1    
 EL88_16950   Bacteroides dorei isolate HS1_L1_B_010 AII64737.1    
 EL88_17015   Bacteroides dorei isolate HS1_L1_B_010 AII64748.1    
 EL88_17065   Bacteroides dorei isolate HS1_L1_B_010 AII64758.1    
 EL88_19330   Bacteroides dorei isolate HS1_L1_B_010 AII65174.1    
 GV66_01105   Bacteroides dorei isolate HS1_L3_B_079 AII66397.1    
 GV66_01055   Bacteroides dorei isolate HS1_L3_B_079 AII66387.1    
 GV66_14425   Bacteroides dorei isolate HS1_L3_B_079 AII68823.1    
 GV66_00960   Bacteroides dorei isolate HS1_L3_B_079 AII66369.1    
 GV66_00650   Bacteroides dorei isolate HS1_L3_B_079 AII66314.1    
 GV66_09115   Bacteroides dorei isolate HS1_L3_B_079 AII67845.1    
 IY41_00615   Bacteroides dorei isolate HS2_L_2_B_045b ALA72159.1    
 IY41_01000   Bacteroides dorei isolate HS2_L_2_B_045b ALA72222.1    
 IY41_01050   Bacteroides dorei isolate HS2_L_2_B_045b ALA72232.1    
 IY41_09090   Bacteroides dorei isolate HS2_L_2_B_045b ALA73600.1    
 IY41_00905   Bacteroides dorei isolate HS2_L_2_B_045b ALA75940.1    
 IY41_14850   Bacteroides dorei isolate HS2_L_2_B_045b ALA74607.1    
 BACOVA_02699 (23740)   Bacteroides ovatus ATCC 8483 EDO11490.1
ZP_02065713.1
A7LXY3  
 Bovatus_03109   Bacteroides ovatus ATCC 8483 ALJ47717.1    
 Bovatus_00676   Bacteroides ovatus ATCC 8483 ALJ45342.1    
 Bovatus_04395   Bacteroides ovatus ATCC 8483 ALJ48988.1    
 Bovatus_02293   Bacteroides ovatus ATCC 8483 ALJ46926.1    
 BACOV975_02195   Bacteroides ovatus V975 SCV08407.1    
 BACOV975_03471   Bacteroides ovatus V975 SCV09677.1    
 BACOV975_00081   Bacteroides ovatus V975 SCV06333.1    
 BACOV975_00872   Bacteroides ovatus V975 SCV07115.1    
 Bacsa_3004   Bacteroides salanitronis DSM 18170 ADY37533.1    
 Bacsa_2324 (fragment)   Bacteroides salanitronis DSM 18170 ADY36872.1    
 Bacsa_2325 (fragment)   Bacteroides salanitronis DSM 18170 ADY36873.1    
 Btheta7330_03966   Bacteroides thetaiotaomicron 7330 ALJ43494.1    
 Btheta7330_02599   Bacteroides thetaiotaomicron 7330 ALJ42141.1    
 BT2912   Bacteroides thetaiotaomicron VPI-5482 AAO78018.1
NP_811824.1
Q8A3P2  
 α-L-rhamnosidase (cleaves L-Rhap-α-1,2-L-Arap; BT0986; BT_0986) 3.2.1.40 Bacteroides thetaiotaomicron VPI-5482 AAO76093.1 Q8A931 5MQM[A]
5MQN[A]
5MWK[A]
 rhamnogalacturonan α-L-rhamnohydrolase (BT4145;BT_4145) 3.2.1.174 Bacteroides thetaiotaomicron VPI-5482 AAO79250.1 Q8A076  
 BVU_0163   Bacteroides vulgatus ATCC 8482 ABR37891.1 A6KWS7  
 BVU_0177   Bacteroides vulgatus ATCC 8482 ABR37905.1 A6KWU1  
 BVU_0187   Bacteroides vulgatus ATCC 8482 ABR37915.1 A6KWV1  
 BVU_2696   Bacteroides vulgatus ATCC 8482 ABR40348.1 A6L3T4  
 BvMPK_2387   Bacteroides vulgatus mpk ALK84984.1    
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