Glycoside Hydrolase Family 106

Activities in Familyα-L-rhamnosidase (EC 3.2.1.40); rhamnogalacturonan α-L-rhamnohydrolase (EC 3.2.1.174)
Mechanism inverting
3D Structure Status( β / α ) 8 barrel
Catalytic Nucleophile/BaseNot known
Catalytic Proton DonorNot known
NoteCreated after reading Miyata et al (2005) Curr Microbiol. 51:105-109
External resourcesCAZypedia;
Statistics GenBank accession (1557); Uniprot accession (11); PDB accession (4); 3D entries (2); cryst (0)
Bacteria
Protein Name EC#ReferenceOrganismGenBank UniprotPDB/3D
 α-L-rhamnosidase (cleaves L-Rhap-α-1,2-L-Arap; BT0986; BT_0986) 3.2.1.40 pubmed
Bacteroides thetaiotaomicron VPI-5482 AAO76093.1 Q8A931 5MQM[A]
5MQN[A]
5MWK[A]
 rhamnogalacturonan α-L-rhamnohydrolase (BT4145;BT_4145) 3.2.1.174 pubmed
Bacteroides thetaiotaomicron VPI-5482 AAO79250.1 Q8A076  
 α-L-rhamnosidase (CB_RAM106B;Athe_2581) 3.2.1.40 pubmed
Caldicellulosiruptor bescii DSM 6725 ACM61646.1 B9MP87  
 α-L-rhamnosidase (BN863_22040) 3.2.1.40 doi
Formosa agariphila KMM 3901 CDF79916.1 T2KNA8  
 α-L-rhamnosidase (B160DRAFT_04058) 3.2.1.40 pubmed
Niabella aurantiaca WP_018627535.1    
 α-L-rhamnosidase (RHA-P;PP1Y_RS05470; PP1Y_Mpl10172) 3.2.1.40 pubmed
Novosphingobium sp. PP1Y CCA90848.1 F6IEX3 6Q2F[A]
 α-L-rhamnosidase (Pjdr2_3683) 3.2.1.40 pubmed
Paenibacillus sp. JDR-2 ACT02314.1 C6D486  
 α-L-rhamnosidase (RhaM) 3.2.1.40 pubmed
Sphingomonas paucimobilis FP2001 / JCM 10661 BAD12237.1 Q76LC4  
 α-L-rhamnosidase (TS_RAM106B;Cst_c00400) 3.2.1.40 pubmed
Thermoclostridium stercorarium subsp. stercorarium DSM 8532 AGI38155.1
AGC67072.1
L7VK28  
 α-L-rhamnosidase (TM_RAMGH106B;Tmari_1078) 3.2.1.40 pubmed
Thermotoga maritima MSB8 AGL50002.1
AAD36151.1
AHD19018.1
AKE28850.1
Q9X0G3
R4P072
 
 α-L-rhamnosidase (Tn_Ram106B;CTN_1495) 3.2.1.40 pubmed
Thermotoga neapolitana DSM 4359 ACM23671.1    
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