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Polysaccharide Lyase Family 38

Activities in FamilyExo-β-1,4-glucuronan lyase (EC 4.2.2.-);
Poly-(MG)-lyase / MG-specific alginate lyase (EC 4.2.2.-);
Poly(α-L-guluronate) lyase / G-specific alginate lyase (EC 4.2.2.11);
Endo-β-1,4-glucuronan lyase (EC 4.2.2.14);
Poly(β-mannuronate) lyase / M-specific alginate lyase (EC 4.2.2.3);
Mechanism b-elimination
3D Structure Status( α / α ) 7 barrel
NoteFamily created after Kikuchi & Konno et al., 2019 [PMID= 31546007] who have shown that the endo-b-1,4-glucuronan lyase activity of the SH203_01541 protein in Brevundimonas sp. SH203; very distant relatedness to PL5
Statistics GenBank accession (1937); Uniprot accession (2); PDB accession (3); 3D entries (2); cryst (0)
Summary
Download PL38 (2539) Taxonomic display Structure (2) Characterized (4)
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Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 JVX97_15425   Sphingobacterium siyangense PDNC006 QRY55433.1    
 Sph21_3510   Sphingobacterium sp. 21 ADZ80048.1    
 Sph21_2867   Sphingobacterium sp. 21 ADZ79414.1    
 BV902_10530   Sphingobacterium sp. B29 APU96724.1    
 QYC40_04050 (fragment)   Sphingobacterium sp. BN32 WKK60403.1    
 GFH32_12385   Sphingobacterium sp. dk4302 QGA27065.1    
 G6053_20235   Sphingobacterium sp. DR205 QIH35081.1    
 OGI71_01780   Sphingobacterium sp. ML3W WFA80023.1    
 OK025_18725   Sphingobacterium sp. UGAL515B_05 WON93275.1    
 OK025_25330   Sphingobacterium sp. UGAL515B_05 WON94552.1    
 NF699_11095   Sphingomonadaceae bacterium OTU29LAMAA1 USU03624.1    
 NF699_11145   Sphingomonadaceae bacterium OTU29LAMAA1 USU03633.1    
 NF700_09630   Sphingomonadaceae bacterium OTU29MARTA1 USU07373.1    
 NF700_09575   Sphingomonadaceae bacterium OTU29MARTA1 USU07362.1    
 NF701_09775   Sphingomonadaceae bacterium OTU29THOMA1 USU10857.1    
 NF701_09830   Sphingomonadaceae bacterium OTU29THOMA1 USU10868.1    
 PBT88_16630   Sphingomonas abietis PAMB00755 WBO21776.1    
 H5J25_10310   Sphingomonas aliaeris DH-S5 QQV75980.1    
 H5J25_10315   Sphingomonas aliaeris DH-S5 QQV75981.1    
 H3Z74_15810   Sphingomonas alpina S8-3T QNQ12060.1    
 H3Z74_15815   Sphingomonas alpina S8-3T QNQ08223.1    
 BRX40_06985   Sphingomonas sp. ABOJV APR52211.1    
 BRX40_06990   Sphingomonas sp. ABOJV APR54870.1    
 FPZ24_10665   Sphingomonas panacisoli HKS19 QDZ07890.1    
 LRS08_13825   Sphingomonas sp. J315 UUX98611.1    
 LRS08_16025   Sphingomonas sp. J315 UUX98988.1    
 O3305_11345   Sphingomonas sp. NIBR02145 NIBR 02145 WHU00817.1    
 NDN01_20460   Sphingomonas sp. QA11 WCM26354.1    
 LZ586_08225   Sphingomonas sp. S2-65 UYY60058.1    
 FPZ54_03290   Sphingomonas suaedae XS-10 QDX25143.1    
 SKP52_19800   Sphingopyxis fribergensis Kp5.2 AJA10828.1    
 SKP52_19805   Sphingopyxis fribergensis Kp5.2 AJA10829.1    
 LH19_23590   Sphingopyxis macrogoltabida 203 ALJ15871.1    
 ATM17_24150   Sphingopyxis macrogoltabida 203N AMU92111.1    
 AN936_19660   Sphingopyxis macrogoltabida EY-1 ALH82495.1    
 EEB18_004205   Sphingopyxis sp. OPL5 QNO28171.1    
 E5675_00390   Sphingopyxis sp. PAMC25046 QCB53049.1    
 E5675_00385   Sphingopyxis sp. PAMC25046 QCB53048.1    
 BWQ93_09320   Sphingopyxis sp. QXT-31 AQA00770.1    
 BWQ93_09315   Sphingopyxis sp. QXT-31 APZ98673.1    
 KEC45_19540   Sphingopyxis sp. USTB-05 USI76903.1    
 KEC45_19535   Sphingopyxis sp. USTB-05 USI76902.1    
 G8759_24255   Spirosoma aureum BT328 QIP15524.1    
 G8759_24290   Spirosoma aureum BT328 QIP15531.1    
 GJR95_34845   Spirosoma endbachense I-24 QHV99877.1    
 GJR95_34840   Spirosoma endbachense I-24 QHV99876.1    
 GJR95_34880   Spirosoma endbachense I-24 QHV99884.1    
 Slin_0557   Spirosoma linguale DSM 74 ADB36621.1    
 Slin_4715   Spirosoma linguale DSM 74 ADB40693.1    
 LQ777_08165   Spirosoma oryzicola RHs26 UHG92866.1    
 SAMN06298216_0596   Spirosomataceae bacterium TFI 002 SOE20097.1    
 SAMN06298216_4280   Spirosomataceae bacterium TFI 002 SOE23906.1    
 RPR59_00165   Stakelama sp. W311 WNO53720.1    
 Q9R17_08515   Stenotrophomonas sp. 24(2023) WMJ71121.1    
 C1927_19985   Stenotrophomonas sp. ZAC14D1_NAIMI4_1 AWH43027.1    
 C1929_19985   Stenotrophomonas sp. ZAC14D1_NAIMI4_6 AWH38896.1    
 SMD44_01480   Streptomyces alboflavus MDJK44 ARX82079.1    
 QR300_08375   Streptomyces antimycoticus FIM95-F1 WJD96012.1    
 HKX69_28965   Streptomyces argyrophyllae Jing01 QJS13030.1    
 O1Q96_20385   Streptomyces aurantiacus Qhu-M197 WAU81937.1    
 G3H79_31490   Streptomyces aureoverticillatus HN6 QIB46939.1    
 BV401_36805   Streptomyces autolyticus CGMCC0516 AQA15147.1    
 SAVERM_6898   Streptomyces avermitilis MA-4680 = NBRC 14893 BAC74609.1    
 SAVMC3_78200   Streptomyces avermitilis MC3 BBJ55191.1    
 SBI_02331   Streptomyces bingchenggensis BCW-1 ADI05452.1    
 GQF42_09805   Streptomyces broussonetiae T44 QHA03525.1    
 DN051_36165   Streptomyces cadmiisoli ZFG47 AWW41438.1    
 OG925_46630   Streptomyces canus NBC_01585 WSD91325.1    
 CP983_37475   Streptomyces chartreusis ATCC 14922 QEV71783.1    
 HUT05_41320   Streptomyces chartreusis NA02069 QKZ23245.1    
 IPT68_02485   Streptomyces chromofuscus DSM 40273 QOV44895.1    
 CRV15_24840   Streptomyces clavuligerus ATCC 27064 QCS08548.1    
 LL058_03290   Streptomyces clavuligerus DSM 738 WDN50955.1    
 D1794_25470   Streptomyces clavuligerus F1D-5 AXU15768.1    
 I3J04_24825   Streptomyces clavuligerus F1D1 QPL65760.1    
 I3J07_24875   Streptomyces clavuligerus F1D10 QPL83899.1    
 I3J08_03215   Streptomyces clavuligerus F1D14 QPL86264.1    
 I3J09_24840   Streptomyces clavuligerus F1D18 QPM01869.1    
 I3J15_24760   Streptomyces clavuligerus F1D25 QPL95902.1    
 I3J16_24850   Streptomyces clavuligerus F1D26 QPM07884.1    
 I3J19_24825   Streptomyces clavuligerus F1D28 QPM26182.1    
 I3J17_03240   Streptomyces clavuligerus F1D31 QPM10132.1    
 I3J18_24865   Streptomyces clavuligerus F1D35 QPM19940.1    
 I3J05_26730   Streptomyces clavuligerus F1D4 QPL72136.1    
 I3J06_24840   Streptomyces clavuligerus F1D7 QPL77873.1    
 BB341_24515   Streptomyces clavuligerus F613-1 ANW21145.1    
 CP976_01870   Streptomyces coeruleorubidus ATCC 13740 QEV23046.1    
 R5U08_36065   Streptomyces coeruleorubidus WT-48 WOT39233.1    
 HGI09_55640   Streptomyces collinus L2 UJA18174.1    
 HGI10_08470   Streptomyces collinus SQ UJA06961.1    
 B446_07495   Streptomyces collinus Tu 365 AGS68323.1    
 M4V62_39345   Streptomyces durmitorensis MS405 UQT60646.1    
 GFH48_33285   Streptomyces fagopyri QMT-28 QFZ77516.1    
 QUY26_33880   Streptomyces flavofungini TRM90047 WJV50076.1    
 AVL59_33700   Streptomyces griseochromogenes ATCC 14511 ANP53857.1    
 DWG14_08054   Streptomyces griseorubiginosus 3E-1 AYC43746.1    
 DWB77_06301   Streptomyces hundungensis BH38 AYG84092.1    
 SHJG_2884   Streptomyces hygroscopicus subsp. jinggangensis 5008 AEY88158.1    
 SHJGH_2648   Streptomyces hygroscopicus subsp. jinggangensis TL01 AGF62314.1    
 SHL15_1435   Streptomyces hygroscopicus subsp. limoneus KCTC 1717 ALO92601.1    
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