Polysaccharide Lyase Family 38

Activities in FamilyExo-β-1,4-glucuronan lyase (EC 4.2.2.-);
Poly-(MG)-lyase / MG-specific alginate lyase (EC 4.2.2.-);
Poly(α-L-guluronate) lyase / G-specific alginate lyase (EC 4.2.2.11);
Endo-β-1,4-glucuronan lyase (EC 4.2.2.14);
Poly(β-mannuronate) lyase / M-specific alginate lyase (EC 4.2.2.3);
Mechanism b-elimination
3D Structure Status( α / α ) 7 barrel
NoteFamily created after Kikuchi & Konno et al., 2019 [PMID= 31546007] who have shown that the endo-b-1,4-glucuronan lyase activity of the SH203_01541 protein in Brevundimonas sp. SH203; very distant relatedness to PL5
Statistics GenBank accession (1937); Uniprot accession (2); PDB accession (3); 3D entries (2); cryst (0)
| 1 | ... | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 PWW31_09120 (fragment)   Vibrio harveyi fish9 WDZ73475.1    
 PWW31_09110 (fragment)   Vibrio harveyi fish9 WDZ73474.1    
 PH545_09240 (fragment)   Vibrio harveyi K2014767 WJT05886.1    
 PH545_09250 (fragment)   Vibrio harveyi K2014767 WJT05887.1    
 VUK78_21100   Vibrio harveyi NH-LM1 WYW32762.1    
 QMY49_08995   Vibrio harveyi SB1 WHP61671.1    
 PQE20_16405   Vibrio harveyi VH21FL WCP80359.1    
 V1M48_20690   Vibrio harveyi WHSS0915 WVM80246.1    
 F9277_10930   Vibrio harveyi WXL538 QFQ77898.1    
 LXG94_17010   Vibrio harveyi XH2145 UIL59831.1    
 ECB94_20230   Vibrio mediterranei 117-T6 AYV23615.1    
 D0812_09885   Vibrio owensii 1700302 AYO14697.1    
 DR996_02165   Vibrio owensii 20160513VC2W QLK44204.1    
 DR996_14225   Vibrio owensii 20160513VC2W QLK46253.1    
 APZ19_11170   Vibrio owensii SH14 QGH47627.1    
 D0856_09730   Vibrio owensii V180403 AYO20337.1    
 A9237_02635   Vibrio owensii XSBZ03 AQW57079.1    
 alginate lyase XI, partial (fragment)   Vibrio pelagius USW90877.1    
 LZI70_20395   Vibrio pelagius WXL662 UTT87179.1    
 ACOMICROBIO_ LOCUS 1583   Vibrio sp. B1ASS3 CAE6915246.1    
 ITG12_05120   Vibrio sp. ED002 UQA51714.1    
 ITG10_00510   Vibrio sp. ED004 UPR56896.1    
 FLM53_01275   Vibrio sp. Scap24 QLE91791.1    
 J4N45_19325   Vibrio sp. SCSIO 43140 USD63152.1    
 J4N37_05385   Vibrio sp. SCSIO 43153 USD51001.1    
 J4N44_05900   Vibrio sp. SCSIO 43155 USD55954.1    
 FIV04_15965   Vibrio sp. THAF190c QFT11415.1    
 alginate lyase   Vibrio ziniensis QOT69926.1    
 G5S32_08965   Vibrio ziniensis ZWAL4003 QIH42118.1    
 C5Q97_08130   Victivallales bacterium CCUG 44730 AVM44685.1    
 AXE80_06075   Wenyingzhuangia fucanilytica CZ1127 ANW95872.1    
 ACZ76_02310   Yersinia aleksiciae 159 AKP35291.1    
 ACZ76_11600   Yersinia aleksiciae 159 AKP34136.1    
 ACZ76_11575   Yersinia aleksiciae 159 AKP34131.1    
 N0K21_05700   Yersinia aleksiciae SCPM-O-B-8086 WQC72807.1    
 N0K21_16960   Yersinia aleksiciae SCPM-O-B-8086 WQC70301.1    
 N0H69_02400   Yersinia alsatica SCPM-O-B-7604 UWM47265.1    
 N0H69_17805   Yersinia alsatica SCPM-O-B-7604 UWM44506.1    
 N0H69_02425   Yersinia alsatica SCPM-O-B-7604 UWM45727.1    
 HRK25_08690   Yersinia bercovieri ATCC 43970 QKJ06972.1    
 HRK25_08665   Yersinia bercovieri ATCC 43970 QKJ06967.1    
 QJR59_02490   Yersinia bercovieri Y195 WWU91509.1    
 QJR59_02465   Yersinia bercovieri Y195 WWU91504.1    
 F0T03_02890   Yersinia canariae NCTC 14382 QHB31237.1    
 F0T03_14880   Yersinia canariae NCTC 14382 QHB33315.1    
 F0T03_02865   Yersinia canariae NCTC 14382 QHB34592.1    
 YE5303_32851   Yersinia enterocolitica (type O:5) str. YE53/03 CCQ41334.1    
 YE5303_28751   Yersinia enterocolitica (type O:5) str. YE53/03 CCQ42186.1    
 YE5303_28801   Yersinia enterocolitica (type O:5) str. YE53/03 CCQ42191.1    
 CH48_3016   Yersinia enterocolitica 2516-87 AJJ27134.1    
 CH48_1129   Yersinia enterocolitica 2516-87 AJJ27590.1    
 CH48_1134   Yersinia enterocolitica 2516-87 AJJ28710.1    
 CH49_2284   Yersinia enterocolitica 8081 AJJ22867.1    
 CH49_4164   Yersinia enterocolitica 8081 AJJ24903.1    
 CH49_4159   Yersinia enterocolitica 8081 AJJ21653.1    
 LI89_06780   Yersinia enterocolitica FORC-002 ALG44436.1    
 LI89_02600   Yersinia enterocolitica FORC-002 ALG43652.1    
 LI89_02575   Yersinia enterocolitica FORC-002 ALG43647.1    
 FORC065_0496   Yersinia enterocolitica FORC065 UXD23412.1    
 FORC065_1410   Yersinia enterocolitica FORC065 UXD24274.1    
 FORC065_0491   Yersinia enterocolitica FORC065 UXD23407.1    
 FORC066_4031   Yersinia enterocolitica FORC066 UXD31234.1    
 FORC066_4036   Yersinia enterocolitica FORC066 UXD31239.1    
 FORC066_3074   Yersinia enterocolitica FORC066 UXD30281.1    
 FORC2_2837   Yersinia enterocolitica FORC_002 AKF38984.1    
 FORC2_3625   Yersinia enterocolitica FORC_002 AKF39772.1    
 FORC2_3630   Yersinia enterocolitica FORC_002 AKF39777.1    
 N4W04_07310   Yersinia enterocolitica Gp169 UYJ86489.1    
 N4W04_19330   Yersinia enterocolitica Gp169 UYJ84649.1    
 N4W04_19355   Yersinia enterocolitica Gp169 UYJ87407.1    
 N4227_04035   Yersinia enterocolitica Gp2 UYJ77544.1    
 N4227_04060   Yersinia enterocolitica Gp2 UYJ78786.1    
 N4227_15485   Yersinia enterocolitica Gp2 UYJ75778.1    
 N4226_06115   Yersinia enterocolitica Gp200 UYK11566.1    
 N4226_17840   Yersinia enterocolitica Gp200 UYK09879.1    
 N4226_17865   Yersinia enterocolitica Gp200 UYK12511.1    
 N4219_06205   Yersinia enterocolitica Gp259 UYJ82079.1    
 N4219_17535   Yersinia enterocolitica Gp259 UYJ80188.1    
 N4219_17510   Yersinia enterocolitica Gp259 UYJ83119.1    
 XM56_06470   Yersinia enterocolitica KNG22703 ALG78079.1    
 XM56_17715   Yersinia enterocolitica KNG22703 ALG80137.1    
 XM56_17740   Yersinia enterocolitica KNG22703 ALG80142.1    
 LC20_01870   Yersinia enterocolitica LC20 AHM73123.2    
 LC20_04713   Yersinia enterocolitica LC20 AHM75966.2    
 LC20_04718   Yersinia enterocolitica LC20 AHM75971.2    
 N4221_19535   Yersinia enterocolitica MP98 UYK01340.1    
 N4221_09550   Yersinia enterocolitica MP98 UYK03650.1    
 N4221_19560   Yersinia enterocolitica MP98 UYK04100.1    
 N4W06_06530   Yersinia enterocolitica NW1 UYJ98702.1    
 N4W06_19220   Yersinia enterocolitica NW1 UYJ99746.1    
 N4W06_19195   Yersinia enterocolitica NW1 UYJ96977.1    
 N4W05_17890   Yersinia enterocolitica NW115 UYK30359.1    
 N4W05_17915   Yersinia enterocolitica NW115 UYK32900.1    
 N4W05_06350   Yersinia enterocolitica NW115 UYK32009.1    
 N4224_19350   Yersinia enterocolitica NW116 UYK14027.1    
 N4224_19375   Yersinia enterocolitica NW116 UYK16791.1    
 N4224_07360   Yersinia enterocolitica NW116 UYK15889.1    
 N4228_06360   Yersinia enterocolitica NW117 UYJ90532.1    
 N4228_17915   Yersinia enterocolitica NW117 UYJ91408.1    
 N4228_17890   Yersinia enterocolitica NW117 UYJ88869.1    
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