Polysaccharide Lyase Family 38

Activities in FamilyExo-β-1,4-glucuronan lyase (EC 4.2.2.-);
Poly-(MG)-lyase / MG-specific alginate lyase (EC 4.2.2.-);
Poly(α-L-guluronate) lyase / G-specific alginate lyase (EC 4.2.2.11);
Endo-β-1,4-glucuronan lyase (EC 4.2.2.14);
Poly(β-mannuronate) lyase / M-specific alginate lyase (EC 4.2.2.3);
Mechanism b-elimination
3D Structure Status( α / α ) 7 barrel
NoteFamily created after Kikuchi & Konno et al., 2019 [PMID= 31546007] who have shown that the endo-b-1,4-glucuronan lyase activity of the SH203_01541 protein in Brevundimonas sp. SH203; very distant relatedness to PL5
Statistics GenBank accession (1937); Uniprot accession (2); PDB accession (3); 3D entries (2); cryst (0)
| 1 | ... | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | ... | 19 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 EJ994_10400   Maribacter sp. MJ134 AZQ59195.1    
 GM418_00555   Maribellus comscasis WC007 QGY42197.1    
 GM418_02610   Maribellus comscasis WC007 QGY48029.1    
 MROS_2316   Melioribacter roseus P3M-2 AFN75546.1    
 A6B35_28030   Mesorhizobium amorphae CCNWGS0123 ANT53450.1    
 Mesci_1865   Mesorhizobium ciceri biovar biserrulae WSM1271 ADV11019.1    
 A4R29_24135   Mesorhizobium ciceri biovar biserrulae WSM1284 AMY02244.1    
 A4R28_17345   Mesorhizobium ciceri CC1192 AMX94715.1    
 LRP29_11245   Mesorhizobium ciceri R30 UTU53919.1    
 LHFGNBLO_002139   Mesorhizobium sp. AR10 UVK41489.1    
 FJ974_08800   Mesorhizobium sp. B1-1-8 UCI09144.1    
 EJ067_24500   Mesorhizobium sp. M1D.F.Ca.ET.043.01.1.1 AZO73942.1    
 EJ079_15070   Mesorhizobium sp. M7A.F.Ce.TU.012.03.2.1 AZV20254.1    
 EJ076_30560   Mesorhizobium sp. M7D.F.Ca.US.005.01.1.1 AZO46306.1    
 A9K65_009745   Mesorhizobium sp. WSM1497 ARP63631.1    
 QNO14_02160   Microbacterium sp. zg-Y625 WIM25879.1    
 PVT68_13420   Microbulbifer bruguierae H12 WGL15766.1    
 GTQ55_16365   Microbulbifer hydrolyticus IRE-31 QHQ40392.1    
 GL2_39630   Microbulbifer sp. GL-2 BBM03889.1    
 HUW35_08225   Microbulbifer sp. YPW1 QKX16989.1    
 IPZ59_04360   Mongoliitalea daihaiensis X100-76 UJP65863.1    
 HYN43_021160   Mucilaginibacter celer HYN0043 AYL97646.1    
 HYN43_021130   Mucilaginibacter celer HYN0043 AYL97640.1    
 SNE26_26765   Mucilaginibacter gossypii cycad4 WPU99623.1    
 J3L18_25455   Mucilaginibacter gossypii P3 QTE36448.1    
 DIU38_022125   Mucilaginibacter gossypii P4 QEM18614.1    
 PQO05_20580   Mucilaginibacter jinjuensis KACC 16571 WCT11140.1    
 PQO05_20590   Mucilaginibacter jinjuensis KACC 16571 WCT11141.1    
 HQ865_08435   Mucilaginibacter mali G2-14 QKJ29782.1    
 HQ865_21900   Mucilaginibacter mali G2-14 QKJ32300.1    
 SAMN05216490_2238   Mucilaginibacter mallensis MP1X4 SDS98685.1    
 DEO27_022585   Mucilaginibacter rubeus P1 QEM12678.1    
 DEO27_022555   Mucilaginibacter rubeus P1 QEM12672.1    
 DIU31_021900   Mucilaginibacter rubeus P2 QEM06033.1    
 J3L19_05590   Mucilaginibacter rubeus P2 QTE44844.1    
 J3L22_03020   Mucilaginibacter rubeus P2-0.1 QTE64010.1    
 J3L23_30810   Mucilaginibacter rubeus P2-0.5 QTE56528.1    
 J3L20_02700   Mucilaginibacter rubeus P2-22.5 QTF62769.1    
 J3L21_05565   Mucilaginibacter rubeus P2-4 QTE51442.1    
 SNE25_22000   Mucilaginibacter sabulilitoris SNA2 WPU91995.1    
 PQ469_17260   Mucilaginibacter sp. KACC 22773 WDF75636.1    
 MusilaSJ_12570   Mucilaginibacter sp. SJ WEA03768.1    
 MTO98_31285   Mucilaginibacter sp. SMC90 UOE48887.1    
 Pan265_05740   Mucisphaera calidilacus Pan265 QDU70739.1    
 Dd703_3628   Musicola paradisiaca Ech703 ACS87386.1    
 LV483_24865   Myxococcales bacterium MSr11368 WXA89488.1    
 JQS30_15115   Natronoglycomyces albus DSM 106290 QSB05068.1    
 A8C56_12425   Niabella ginsenosidivorans BS26 ANH81681.1    
 A8C56_15765   Niabella ginsenosidivorans BS26 ANH82225.1    
 NIASO_10870   Niabella soli DSM 19437 AHF15525.1    
 U0035_01725   Niabella yanshanensis HAMBI_3031 WQD38862.1    
 Niako_5380   Niastella koreensis GR20-10 AEW01617.1    
 Niako_5371   Niastella koreensis GR20-10 AEW01608.1    
 CMV30_03455   Verrucomicrobiota bacterium HZ-65 ATC63087.1    
 C0V82_24115   Niveispirillum cyanobacteriorum TH16 AUN33442.1    
 F5544_18795   Nocardia arthritidis AUSMDU00012717 QIS11630.1    
 FKG96_15075   Olivibacter sp. LS-1 QEL02074.1    
 FKG96_11745   Olivibacter sp. LS-1 QEL04345.1    
 H8S90_08530   Olivibacter sp. SDN3 QNL51602.1    
 OPIT5_11635   Opitutaceae bacterium TAV5 AHF90756.1    
 OPIT5_08440   Opitutaceae bacterium TAV5 AHF90224.1    
 OPIT5_17055   Opitutaceae bacterium TAV5 AHF91671.1    
 OPIT5_14895   Opitutaceae bacterium TAV5 AHF91307.1    
 OPIT5_04750   Opitutaceae bacterium TAV5 AHF89643.1    
 OPIT5_15055   Opitutaceae bacterium TAV5 AHF91331.1    
 SAMN05444173_2498   Opitutus sp. GAS368 SDS30762.1    
 SAMN05444173_1183   Opitutus sp. GAS368 SDR87420.1    
 E6C60_3334   Paenibacillus algicola HB172198 QCT04045.1    
 E6C60_3334   Paenibacillus algicola HB172198 QCT04045.1    
 E6C60_0773   Paenibacillus algicola HB172198 QCT01494.1    
 MJA45_01695 (fragment)   Paenibacillus aurantius MBLB1776 WNQ11794.1    
 SK3146_05960 (fragment)   Paenibacillus konkukensis SK3146 UQZ86667.1    
 SK3146_01859   Paenibacillus konkukensis SK3146 UQZ82700.1    
 B2K_38500   Paenibacillus mucilaginosus K02 AGN70569.1    
 ERY13_04425   Paenibacillus mucilaginosus KN-18 WFA16658.1    
 KNP414_00945   Paenibacillus mucilaginosus KNP414 AEI39535.1    
 KCX80_04405   Paenibacillus mucilaginosus PM12 WDM28492.1    
 N6H14_12255 (fragment)   Paenibacillus sp. CC-CFT747 WJH36463.1    
 DVH26_21355   Paenibacillus sp. H1-7 ULL16764.1    
 DVH26_17125   Paenibacillus sp. H1-7 ULL16016.1    
 DVH26_27780   Paenibacillus sp. H1-7 ULL17929.1    
 DVH26_05730   Paenibacillus sp. H1-7 ULL13990.1    
 LOZ80_06120   Paenibacillus sp. HWE-109 UKS28508.1    
 LOZ80_05510   Paenibacillus sp. HWE-109 UKS28394.1    
 L1F29_24735   Paenibacillus spongiae PHS-Z3 UVI28629.1    
 IRI77_05120   Paludibaculum fermentans P105 QOY89340.1    
 AL486_07895   Pandoraea apista FDAARGOS_126 AVF39642.1    
 B9Q16_07495   Pantoea ananatis 97-1 AVG75859.1    
 PAJ_0133   Pantoea ananatis AJ13355 BAK10213.1    
 FOB88_21185   Pantoea ananatis FDAARGOS_680 QKV89469.1    
 PAFU01_33250   Pantoea ananatis FU-01 BBL31877.1    
 LVR30_10315   Pantoea ananatis JBR-LB3-16 URL16582.1    
 NG826_13800   Pantoea ananatis JT1-188 UYK91613.1    
 NG830_08805   Pantoea ananatis JT8-6 UYL03408.1    
 PANA_0787   Pantoea ananatis LMG 20103 ADD75954.1    
 PANA5342_3520   Pantoea ananatis LMG 5342 CCF10913.1    
 IAQ00_17910   Pantoea ananatis Lstri USL57516.1    
 EPK90_18455   Pantoea ananatis NN08200 QAB31629.1    
 H0Z12_18350   Pantoea ananatis OC5a QTC45631.1    
 PAGR_g3411   Pantoea ananatis PA13 AER33903.1    
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