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Polysaccharide Lyase Family 38

Activities in FamilyExo-β-1,4-glucuronan lyase (EC 4.2.2.-);
Poly-(MG)-lyase / MG-specific alginate lyase (EC 4.2.2.-);
Poly(α-L-guluronate) lyase / G-specific alginate lyase (EC 4.2.2.11);
Endo-β-1,4-glucuronan lyase (EC 4.2.2.14);
Poly(β-mannuronate) lyase / M-specific alginate lyase (EC 4.2.2.3);
Mechanism b-elimination
3D Structure Status( α / α ) 7 barrel
NoteFamily created after Kikuchi & Konno et al., 2019 [PMID= 31546007] who have shown that the endo-b-1,4-glucuronan lyase activity of the SH203_01541 protein in Brevundimonas sp. SH203; very distant relatedness to PL5
Statistics GenBank accession (1937); Uniprot accession (2); PDB accession (3); 3D entries (2); cryst (0)
Summary
Download PL38 (2539) Taxonomic display Structure (2) Characterized (4)
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Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 SHXM_02377   Streptomyces hygroscopicus XM201 AQW48914.1    
 ABB07_31575   Streptomyces incarnatus NRRL 8089 AKJ14431.1    
 SIRAN2057   Streptomyces iranensis CDR05081.1    
 HA039_28960   Streptomyces liangshanensis QMT-12 QIQ05795.1    
 SLINC_8105   Streptomyces lincolnensis NRRL 2936 ANS70329.1    
 LGI35_10430   Streptomyces longhuiensis BH-MK-02 UDL98647.1    
 SMALA_6573   Streptomyces malaysiensis DSM 4137 ATL86801.1    
 DNK48_09955   Streptomyces malaysiensis DSM 4137 QDL69681.1    
 R8789_10240   Streptomyces malaysiensis NA3722 WPB89599.1    
 SMIR_32730   Streptomyces mirabilis P16B-1 QUW83330.1    
 POD33_29910   Streptomyces moderatus DT446 WCH96128.1    
 DC008_04140   Streptomyces nigra 452 AWE48973.1    
 Spa2297_02785   Streptomyces parvulus 2297 ANJ06002.1    
 BFF78_34365   Streptomyces puniciscabiei TW1S1 AOR35481.1    
 M271_10025   Streptomyces rapamycinicus NRRL 5491 AGP53616.1    
 LIV37_10165   Streptomyces rapamycinicus NRRL 5491 UTP29705.1    
 LJB45_05050   Streptomyces rapamycinicus SRMK07 UTO61753.1    
 I1A49_36665   Streptomyces solisilvae HNM0141 QPI59689.1    
 CGL27_38860   Streptomyces sp. 11-1-2 ASQ98195.1    
 SAMN05444521_0310   Streptomyces sp. 3214.6 SHH37969.1    
 IOD14_24150   Streptomyces sp. A2-16 QUC59591.1    
 N7U49_09625   Streptomyces sp. AD2-2 UXX92528.1    
 AS97_13305   Streptomyces sp. AgN23 AJZ83511.1    
 RPQ07_30930   Streptomyces sp. AM2-3-1 WNO75753.1    
 RPQ02_07835   Streptomyces sp. AM8-1-1 WNO63710.1    
 OH540_32635   Streptomyces sp. BPPL-273 WHM34535.1    
 QIY60_24695   Streptomyces sp. BPTC-684 WHM39722.1    
 JIX56_01880   Streptomyces sp. CA-210063 UUU28741.1    
 AS200_36410   Streptomyces sp. CdTB01 ALV36955.1    
 JIX55_45350   Streptomyces sp. DSM 40750 UUU26876.1    
 WJM95_04415   Streptomyces sp. f51 WYH81715.1    
 KBP30_33030   Streptomyces sp. Go40/10 Go 40/10 UFR05695.1    
 LUX31_00450   Streptomyces sp. GQFP UIX28617.1    
 LUV23_36800   Streptomyces sp. HNM0561 UHH21356.1    
 MQE23_03785   Streptomyces sp. HP-A2021 UOB08229.1    
 N8I86_08055   Streptomyces sp. HUAS 14-6 UXY34688.1    
 N8I87_07100   Streptomyces sp. HUAS 15-9 UXY26364.1    
 PGH47_05825   Streptomyces sp. HUAS 31 WCD95202.1    
 KJK32_07000   Streptomyces sp. JCM17656 QWA21160.1    
 MUK60_40805   Streptomyces sp. LRE541 UPZ33589.1    
 CFP59_02035   Streptomyces sp. M56 AUA09945.1    
 R2B38_04930   Streptomyces sp. N50 WOX08261.1    
 QFW82_10130   Streptomyces sp. NA07423 WHX17390.1    
 OG406_32585   Streptomyces sp. NBC_01428 WUX78123.1    
 OG522_30675   Streptomyces sp. NBC_01431 WUX63116.1    
 OG574_36980   Streptomyces sp. NBC_01445 WSE08467.1    
 HYQ63_35360   Streptomyces sp. Rer75 QLH25273.1    
 HEP84_12175   Streptomyces sp. RLB1-33 QIY69803.1    
 FNV59_14275   Streptomyces sp. RLB1-8 QDO59118.1    
 FNV58_14970   Streptomyces sp. RLB1-9 QDN97124.1    
 FNV62_12505   Streptomyces sp. RLB3-17 QDO38856.1    
 FNV60_12035   Streptomyces sp. RLB3-5 QDO48878.1    
 FNV61_13240   Streptomyces sp. RLB3-6 QDN86445.1    
 HEP85_07990   Streptomyces sp. RPA4-2 QIY61630.1    
 FNV63_13435   Streptomyces sp. S1A1-3 QDO28958.1    
 FNV64_15300   Streptomyces sp. S1A1-7 QDN76756.1    
 FNV65_13415   Streptomyces sp. S1A1-8 QDO18830.1    
 HEP87_12290   Streptomyces sp. S1D4-11 QIY94656.1    
 FNV66_13780   Streptomyces sp. S1D4-14 QDN66470.1    
 FNV67_14185   Streptomyces sp. S1D4-20 QDN56293.1    
 FNV68_14340   Streptomyces sp. S1D4-23 QDO07258.1    
 C8250_010880   Streptomyces sp. So13.3 QNA72349.1    
 Q3101_02780   Streptomyces sp. VNUA74 WML78818.1    
 C9F11_07615   Streptomyces sp. YIM 121038 QCX75219.1    
 CP982_08580   Streptomyces spectabilis ATCC 27465 QEV58770.1    
 FH965_07360   Streptomyces spectabilis NRRL 2792 QDQ10405.1    
 LXH13_07185   Streptomyces spinosirectus CRSS-Y-16 UIR16837.1    
 SSPO_022690   Streptomyces sporoclivatus NBRC 100767 BBJ39551.1    
 Strvi_3100   Streptomyces violaceusniger Tu 4113 AEM82797.1    
 H8F25_14645   Synechococcus sp. CBW1004 QPN62864.1    
 C1A40_13060   Tamlana carrageenivorans UJ94 AUS06317.1    
 FTW19_16420   Terriglobus albidus ORNL QEE31395.1    
 FTW19_13020   Terriglobus albidus ORNL QEE28843.1    
 Terro_1223   Terriglobus roseus DSM 18391 AFL87533.1    
 Terro_1660   Terriglobus roseus DSM 18391 AFL87963.1    
 SAMN05444167_1866   Terriglobus roseus GAS232 SDF25806.1    
 AciPR4_1697   Terriglobus saanensis SP1PR4 ADV82504.1    
 AciPR4_0334   Terriglobus saanensis SP1PR4 ADV81171.1    
 TVD_05150   Thioalkalivibrio versutus D301 AKJ94791.1    
 QMG90_05110   Trabulsiella odontotermitis TBY01 WHP32312.1    
 A6F68_01708   Tsuneonella dongtanensis KCTC 22672 ANY20220.1    
 alginate lyase, polysaccharide lyase family PL5   uncultured bacterium AOE10377.1    
 SPPYR_3579   uncultured Sphingopyxis sp. isolate UC10 SBV34694.1    
 SPPYR_3580   uncultured Sphingopyxis sp. isolate UC10 SBV34695.1    
 IMCC26134_14375   Verrucomicrobia bacterium IMCC26134 AKC83665.1    
 CMV30_06060 (possible fragment)   Verrucomicrobiota bacterium HZ-65 ATC63552.1    
 PYE67_17890   Vibrio aestuarianus U17 WGK86819.1    
 PYE51_06425   Vibrio aestuarianus U29 WGK82876.1    
 VYA_16980   Vibrio alfacsensis 04Ya108 BCN24506.1    
 VA249_09860 (fragment)   Vibrio alfacsensis 04Ya249 BBM64340.1    
 D1115_05440   Vibrio alfacsensis CAIM 1831 AXY00758.1    
 GFB47_15430   Vibrio algicola SM1977 QGA66779.1    
 GT360_18085   Vibrio astriarenae HN897 QIA65450.1    
 GT360_18280   Vibrio astriarenae HN897 QIA65486.1    
 GT360_18080   Vibrio astriarenae HN897 QIA65449.1    
 GT360_17955   Vibrio astriarenae HN897 QIA65424.1    
 A134_08125   Vibrio crassostreae 9CS106 ANP76366.1    
 BG259_01790   Vibrio harveyi APP04163.1    
 LA59_06850   Vibrio harveyi ATCC 33843 (392 [MAV]) AIV05194.1    
 AL538_15495   Vibrio harveyi ATCC 43516 AMF99020.1    
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