Polysaccharide Lyase Family 38

Activities in FamilyExo-β-1,4-glucuronan lyase (EC 4.2.2.-);
Poly-(MG)-lyase / MG-specific alginate lyase (EC 4.2.2.-);
Poly(α-L-guluronate) lyase / G-specific alginate lyase (EC 4.2.2.11);
Endo-β-1,4-glucuronan lyase (EC 4.2.2.14);
Poly(β-mannuronate) lyase / M-specific alginate lyase (EC 4.2.2.3);
Mechanism b-elimination
3D Structure Status( α / α ) 7 barrel
NoteFamily created after Kikuchi & Konno et al., 2019 [PMID= 31546007] who have shown that the endo-b-1,4-glucuronan lyase activity of the SH203_01541 protein in Brevundimonas sp. SH203; very distant relatedness to PL5
Statistics GenBank accession (1937); Uniprot accession (2); PDB accession (3); 3D entries (2); cryst (0)
| 1 | ... | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | ... | 19 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 C5E17_01790   Pectobacterium parmentieri IFB5408 AYH34893.1    
 C5E18_01625   Pectobacterium parmentieri IFB5427 AZS54959.1    
 C5E19_01625   Pectobacterium parmentieri IFB5432 AYH30464.1    
 C5E20_01835   Pectobacterium parmentieri IFB5441 AYH26011.1    
 C5E21_01735   Pectobacterium parmentieri IFB5485 AYH21744.1    
 C5E22_20995   Pectobacterium parmentieri IFB5486 AYH20731.1    
 C5E23_01740   Pectobacterium parmentieri IFB5604 AYH13042.1    
 C5E24_01625   Pectobacterium parmentieri IFB5605 AYH08526.1    
 C5E25_01755   Pectobacterium parmentieri IFB5619 AYH04221.1    
 C5E26_01630   Pectobacterium parmentieri IFB5623 AYG99773.1    
 PB20LOC_021970   Pectobacterium parmentieri PB20 QPK19997.1    
 IG623_01720   Pectobacterium parmentieri QK-5 QRN30403.1    
 A8F97_16810   Pectobacterium parmentieri RNS08.42.1A AOR60541.1    
 W5S_0324   Pectobacterium sp. SCC3193 AFI88451.1    
 JBL47_20385   Pectobacterium parmentieri WC19161 QQA75627.1    
 Pecwa_0310   Pectobacterium parmentieri WPP163 ACX86163.1    
 LOZ86_20295   Pectobacterium parvum FN20211 UFK39180.1    
 NV347_20250   Pectobacterium parvum YT22221 UVD97289.1    
 BJJ97_06865   Pectobacterium carotovorum Polaris ASY75652.1    
 BJK05_18235   Pectobacterium carotovorum SK-992-20-13 ASY81814.1    
 GMX10_05450   Pectobacterium polaris PZ1 QHQ23578.1    
 KSL88_20325   Pectobacterium polaris QK413-1 UAY91790.1    
 LW347_01855   Pectobacterium polonicum BY21311 UVO08763.1    
 E2566_01805   Pectobacterium punjabense SS95 QJA18759.1    
 IG605_001685   Pectobacterium quasiaquaticum A398-S21-F17 URG53117.1    
 IG609_001825   Pectobacterium quasiaquaticum A477-S1-J17 URG49357.1    
 MYB54_19940   Pectobacterium sp. 21LCBS03 UPY94808.1    
 O1Q74_01575   Pectobacterium sp. A5351 WCG83433.1    
 NAL19_329   Pectobacterium sp. F1-1 UYA58598.1    
 HP572_21985   Pectobacterium sp. PL64 UMO87884.1    
 LLE50_13580   Pectobacterium versatile A73-S18-O15 UEQ07899.1    
 IMY97_21855   Pectobacterium versatile ECC15 UNE78983.1    
 F131LOC_001450   Pectobacterium versatile F131 QPK16096.1    
 HG702_21615   Pectobacterium versatile MYP201603 QQK73705.1    
 F9W95_05805   Pectobacterium versatile RC5297 ULS45140.1    
 LGL96_12265   Pectobacterium versatile SR1 UCP84204.1    
 LGL95_20630   Pectobacterium versatile SR12 UCP81375.1    
 A7983_09710   Pectobacterium wasabiae CFBP 3304 AOR63529.1    
 FYC62_01015   Pedobacter aquae CJ43 QEK50406.1    
 AY601_2705   Pedobacter cryoconitis PAMC 27485 AMP99590.1    
 AY601_1184   Pedobacter cryoconitis PAMC 27485 AMP98109.1    
 IZT61_03440   Pedobacter endophyticus JBR3-12 QPH40346.1    
 QG516_07585   Pedobacter gandavensis WB7 WGQ11515.1    
 CPT03_04485   Pedobacter ginsengisoli T01R-27 ATP55775.1    
 Phep_2696   Pedobacter heparinus DSM 2366 ACU04897.1    
 LOK61_05535   Pedobacter mucosus Q8-18 UKT65242.1    
 H9L23_08405   Pedobacter roseus KACC 11594 QNN44081.1    
 G7074_21450   Pedobacter sp. HDW13 QIL41602.1    
 G7074_00450   Pedobacter sp. HDW13 QIL37887.1    
 AQ505_07305   Pedobacter sp. PACM 27299 ALL08685.1    
 H7F33_13670   Pedobacter sp. PAMC26386 QNK61601.1    
 H7F33_05685   Pedobacter sp. PAMC26386 QNK64902.1    
 OVA16_13740   Pedobacter sp. SL55 WAC39638.1    
 BFS30_18130   Pedobacter steynii DX4 AOM78918.1    
 UFO1_0810   Pelosinus sp. UFO1 AIF50365.1    
 H744_1c1637   Photobacterium gaetbulicola Gung47 AJR06655.1    
 PTW35_27115   Photobacterium sp. DA100 WEM44921.1    
 Pla175_00170   Pirellulimonas nuda Pla175 QDU86667.1    
 MalM25_07890   Planctomycetes bacterium MalM25 QDT67881.1    
 JD969_16480   Planctomycetota bacterium ZRK32 QQE11078.1    
 H9I45_00430   Polaribacter haliotis KCTC 52418 QOD60940.1    
 BXQ17_09730   Polaribacter sp. BM10 AQS94324.1    
 PCO85_02075   Prodigiosinella aquatilis LS101 WJV54292.1    
 CWC46_00355   Prodigiosinella confusarubida ATCC 39006 AUG98409.1    
 Ser39006_000355   Prodigiosinella confusarubida ATCC 39006 AUH02724.1    
 G7070_06255   Propioniciclava coleopterorum HDW11 QIK71943.1    
 Paes_0823   Prosthecochloris aestuarii DSM 271 ACF45869.1    
 CHL67_01615   Prosthecochloris sp. GSB1 ASQ89791.1    
 APS56_11050   Pseudalgibacter alginicilyticus HZ22 ALJ05630.1    
 G163CM_19880   Pseudocitrobacter corydidari isolate G163CM UGS41286.1    
 G163CM_19830   Pseudocitrobacter corydidari isolate G163CM UGS41281.1    
 OFY05_09870   Pseudocitrobacter faecalis JM1 UYW75691.1    
 Daes_2755   Pseudodesulfovibrio aespoeensis Aspo-2 ADU63751.1    
 GM415_00025   Pseudodesulfovibrio cashew SRB007 QGY38597.1    
 DND132_1446   Pseudodesulfovibrio mercurii ND132 EGB14654.1    
 SYK_16370   Pseudodesulfovibrio nedwellii SYK BDQ37277.1    
 JCM14722_10710   Pseudodesulfovibrio portus JCM 14722 BDQ33529.1    
 DPRO_3126   Pseudodesulfovibrio profundus 500-1 SOB60038.1    
 PSDVSF_14290   Pseudodesulfovibrio sediminis SF6 BCS88187.1    
 V8V93_17815   Pseudodesulfovibrio sp. 5S69 WWX22290.1    
 HFN16_11660   Pseudodesulfovibrio sp. zrk46 QJB57016.1    
 Pedsa_0506   Pseudopedobacter saltans DSM 12145 ADY51087.1    
 Pedsa_1497   Pseudopedobacter saltans DSM 12145 ADY52058.1    
 Pedsa_0844   Pseudopedobacter saltans DSM 12145 ADY51416.1    
 PU629_02725   Pullulanibacillus sp. KACC 23026 WEG13297.1    
 MNO10_05650   Rahnella aceris S2-A69 UNK54295.1    
 JHW33_06465   Rahnella aceris ZF458 QQN36270.1    
 Rahaq2_2211   Rahnella aquatilis CIP 78.65 = ATCC 33071 AEX52067.1    
 FS594_11160   Rahnella aquatilis H145 UJD89299.1    
 Q7S_10510   Rahnella aquatilis HX2 AFE58336.1    
 EJP80_10560   Rahnella aquatilis KM05 AZP50923.1    
 EJP81_10170   Rahnella aquatilis KM12 AZP46519.1    
 EJP79_10165   Rahnella aquatilis KM25 AZP42179.1    
 EYS10_25790   Rahnella aquatilis MEM40 QBJ11741.1    
 D3Z09_10760   Rahnella aquatilis ZF7 AYA06986.1    
 I2123_12385   Rahnella inusitata QUT13534.1    
 BV494_05095   Rahnella sikkimica ERMR1:05 AVF34343.1    
 Rahaq_2073   Rahnella sp. Y9602 ADW73684.1    
 J9880_19110   Rahnella victoriana JZ-GX1 UHM90384.1    
 ATN83_2000   Klebsiella pneumoniae Yangling I2 ALQ46117.1    
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