Glycoside Hydrolase Family 50

Activities in Familyβ-agarase (EC 3.2.1.81).
Mechanism probably retaining
ClanGH-A
Catalytic Nucleophile/BaseGlu (inferred)
Catalytic Proton DonorGlu (inferred)
External resourcesCAZypedia;
Statistics GenBank accession (495); Uniprot accession (57); PDB accession (5); 3D entries (2); cryst (0)
All (476) Archaea (7) Bacteria (469) Structure (2) Characterized (22)
| 1 | 2 | 3 | 4 | 5 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 PflA506_1284   Pseudomonas fluorescens A506 AFJ58504.1    
 SAMN04488487_3615   Pseudomonas fluorescens ATCC 13525 SNY10845.1    
 AO353_17025   Pseudomonas fluorescens FW300-N2E3 ALI02698.1    
 AYK59_11540   Pseudomonas fluorescens KENGFT3 AMS20739.1    
 A7319_06475   Pseudomonas fluorescens L111 AOE72473.1    
 A7318_05840   Pseudomonas fluorescens L228 AOE78123.1    
 A7317_06460   Pseudomonas fluorescens L321 AOE66652.1    
 VO64_4484   Pseudomonas fluorescens LBUM223 AKA85030.1    
 AK972_4655   Pseudomonas fluorescens LBUM636 AMW85455.1    
 B723_11925   Pseudomonas fluorescens NCIMB 11764 AKV07076.1    
 PF1751_v1c12780   Pseudomonas fluorescens PCL1751 AJP50984.1    
 Pfl_1226   Pseudomonas fluorescens Pf0-1 ABA72969.1 Q3KGY7  
 PFLUOLIPICF7_01675   Pseudomonas fluorescens PICF7 AJZ92369.1    
 BH711_02360   Pseudomonas fluorescens Pt14 AOS72800.1    
 PFLU1325   Pseudomonas fluorescens SBW25 CAY47580.1 C3K7J9  
 CDA60_18420   Pseudomonas fragi DBC ASC88188.1    
 B6D87_05335   Pseudomonas fragi NMC25 ARQ73663.1    
 SAMN05216594_4186   Pseudomonas fragi NRRL B-727 SDU62850.1    
 AV641_05210   Pseudomonas fragi P121 AMB78508.1    
 PFAS1_17845   Pseudomonas frederiksbergensis AS1 APV41125.1    
 BLL42_07650   Pseudomonas frederiksbergensis ERDD5:01 APC15608.1    
 CNN82_06635   Pseudomonas frederiksbergensis KNU-15 ATE76112.1    
 Psefu_3340   Pseudomonas fulva 12-X AEF23302.1    
 SAMN05216581_1763   Pseudomonas fuscovaginae LMG 2158 SEI06951.1    
 SAMN05216579_0942   Pseudomonas granadensis LMG 27940 SDS50390.1    
 PKB_1477   Pseudomonas knackmussii B13 CDF82839.1    
 SAMN04490189_1164   Pseudomonas koreensis BS3658 SDC99762.1    
 A8L59_06165   Pseudomonas koreensis CRS05-R5 ANH96989.1    
 AYO71_08905   Pseudomonas koreensis D26 AMT87659.1    
 SAMN04490190_2588   Pseudomonas libanensis BS2975 SDK96874.1    
 SAMN04490191_5933   Pseudomonas lini BS3782 SDT65454.1    
 OU5_2189   Pseudomonas mandelii JR-1 AHZ69268.1    
 SAMN04489801_0686   Pseudomonas mandelii LMG 21607 SDU07370.1    
 X969_20300   Pseudomonas monteilii SB3078 AHC84183.1    
 X970_19935   Pseudomonas monteilii SB3101 AHC89554.1    
 APT63_15630   Pseudomonas monteilii USDA-ARS-USMARC-56711 AMA46929.1    
 SAMN04490196_0279   Pseudomonas moraviensis BS3668 SDU05783.1    
 CLJ08_06710   Pseudomonas mosselii BS011 ATB64319.1    
 O165_016785   Pseudomonas mosselii SJ10 AIN59853.1    
 SAMN05216202_3372   Pseudomonas mucidolens LMG 2223 SDV02722.1    
 SAMN04490197_5230   Pseudomonas orientalis BS2775 SDU35491.1    
 SAMN05216221_1137   Pseudomonas oryzae KCTC 32247 SDS13109.1    
 NJ69_02490   Pseudomonas parafulva CRS01-1 AIZ31966.1    
 B2J77_05135   Pseudomonas parafulva PRS09-11288 AQW67668.1    
 RK21_00391   Pseudomonas plecoglossicida NyZ12 AJG11899.1    
 SAMN04490208_1901   Pseudomonas poae BS2776 SDN91471.1    
 H045_03425   Pseudomonas poae RE*1-1-14 AGE24761.1    
 SAMN05216296_2300   Pseudomonas pohangensis DSM 17875 SDU19040.1    
 SAMN05216222_1276   Pseudomonas prosekii LMG 26867 SDS35715.1    
 PPC_1334   Pseudomonas protegens Cab57 BAO60681.1    
 PFLCHA0_c13150 (AgaB)   Pseudomonas protegens CHA0 AGL83105.1    
 CEP86_01515   Pseudomonas protegens FDAARGOS_307 ASE19223.1    
 H78_01339   Pseudomonas protegens H78 AQT08042.1    
 PFL_1280   Pseudomonas protegens Pf-5 AAY90565.1 Q4KH74  
 KF707C_16970   Pseudomonas pseudoalcaligenes KF707 = NBRC 110670 BAU73385.1    
 SAMN04490201_1674   Pseudomonas psychrophila BS3667 SDU44502.1    
 AWT69_001186   Pseudomonas putida 1A00316 AMK29823.1    
 KKK_26760   Pseudomonas putida B6-2 ANC84411.1    
 PPUBIRD1_1172   Pseudomonas putida BIRD-1 ADR58854.1 E4R769  
 DW66_4526   Pseudomonas putida DLL-E4 AHZ79025.1    
 T1E_1863 (AgaB)   Pseudomonas putida DOT-T1E AFO47711.1    
 Pput_1162   Pseudomonas putida F1 ABQ77323.1 A5VZL3  
 PputGB1_4289   Pseudomonas putida GB-1 ABZ00178.1 B0KUB2  
 L483_25805   Pseudomonas putida H8234 AGN80240.1    
 B479_20720   Pseudomonas putida HB3267 PC9 AGA75034.1    
 IEC33019_2340   Pseudomonas putida IEC33019 ANY87887.1    
 Q5O_05860   Pseudomonas putida JB AOX07933.1    
 KF715C_ch46650   Pseudomonas putida KF715 BAW25238.1    
 SAMN05216307_5537   Pseudomonas putida KT2440 SKC20731.1    
 PP1126   Pseudomonas putida KT2440 AAN66751.1
NP_743287.1
Q88NS8  
 SAMN05216501_2197   Pseudomonas putida N1R SIR83791.1    
 PP4_10670   Pseudomonas putida NBRC 14164 BAN52920.1    
 YSA_07314   Pseudomonas putida ND6 AFK70726.1    
 AB688_08770   Pseudomonas putida PC2 ANC02221.1    
 BG030_20965   Pseudomonas putida PP112420 APF00307.1    
 RPPX_03515   Pseudomonas putida S12 AJA12438.1    
 N805_28100   Pseudomonas putida S13.1.2 AJQ50881.1    
 PPS_4135   Pseudomonas putida S16 AEJ14674.1    
 A210_05615   Pseudomonas putida SJTE-1 ANI02123.1    
 PputW619_1147   Pseudomonas putida W619 ACA71652.1 B1J1C1  
 SAMN04490202_1310   Pseudomonas reinekei BS3776 SDO58028.1    
 PCA10_15960   Pseudomonas resinovorans NBRC 106553 BAN47328.1    
 SAMN04490209_3611   Pseudomonas rhodesiae BS2777 SDV12329.1    
 PS417_06515   Pseudomonas simiae WCS417 AIB35233.1    
 PMA3_05240   Pseudomonas sp. A3(2016) ANJ54602.1    
 H681_07305   Pseudomonas sp. ATCC 13867 AGI23337.1    
 SAMN05216509_4559   Pseudomonas sp. B10 SIR75757.1    
 AA042_04695   Pseudomonas sp. BS-2016 AU1044 AOZ12029.1    
 SAMN04490210_4304   Pseudomonas sp. bs2935 SDS96433.1    
 CCOS191_1229   Pseudomonas sp. CCOS 191 CRI55765.1    
 PDR5_12740   Pseudomonas sp. DR 5-09 ANI53004.1    
 BL240_21975   Pseudomonas sp. DRA525 APO83958.1    
 C163_20700   Pseudomonas sp. FGI182 AHD16055.1    
 PGR6_45290   Pseudomonas sp. GR 6-02 ANI62102.1    
 AA098_21810   Pseudomonas sp. JY-Q ANI35990.1    
 LAB08_4044   Pseudomonas sp. LAB-08 BAV29314.1    
 B9K09_16200   Pseudomonas sp. M30-35 ARU89416.1    
 TO66_06525   Pseudomonas sp. MRSN12121 AJO76967.1    
 AWU82_22495   Pseudomonas sp. MS586 AMQ85974.1    
 CI807_13530   Pseudomonas sp. NS1(2017) ASV37162.1    
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