Glycoside Hydrolase Family 50

Activities in Familyβ-agarase (EC 3.2.1.81).
Mechanism probably retaining
ClanGH-A
Catalytic Nucleophile/BaseGlu (inferred)
Catalytic Proton DonorGlu (inferred)
External resourcesCAZypedia;
Statistics GenBank accession (499); Uniprot accession (57); PDB accession (5); 3D entries (2); cryst (0)
All (480) Archaea (7) Bacteria (473) Structure (2) Characterized (22)
| 1 | 2 | 3 | 4 | 5 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 AgaB   Agarivorans albus HD AGE97354.1    
 β-agarase (AgaA34) (peptide fragment) 3.2.1.81 Agarivorans albus YKW-34 P85974.1    
 β-agarase (Wh50B)   Agarivorans gilvus WH0801 AQT38174.1    
 neoagarotetraose-producing β-agarase (exo-type) (AgWH50A) 3.2.1.81 Agarivorans gilvus WH0801 AFP32918.1    
 β-agarase (AgWH50C) (neoagarobiose-producing) 3.2.1.81 Agarivorans gilvus WH0801 AHM94172.1    
 β-agarase (AgrA) (neoagarotetraose- and neoagarobiose-producing) 3.2.1.81 Agarivorans sp. AG17 ACU52709.1 D3GCV0  
 AgaB   Agarivorans sp. HS AGE97355.1    
 agarase (Hz1;HZ-a;HZ-b;HZ-c) 3.2.1.81 Agarivorans sp. HZ105 ADY17918.1    
 β-agarase (Hz2) (neoagarotetraose-producing) 3.2.1.81 Agarivorans sp. HZ105 ADY17919.1    
 β-agarase (neoagarobiose-producing) 3.2.1.81 Agarivorans sp. JA-1 ABK97391.1 A1E2A6  
 β-agarase (AgaA11) (neoagarobiose-producing) 3.2.1.81 Agarivorans sp. JAMB-A11 BAD99519.1 Q4W8F0  
 AgaB   Agarivorans sp. JL AGE97353.1    
 β-agarase (AgaD01)   Agarivorans sp. QM38 ABK51379.1 A0MWB7  
 β-agarase (AgaD02) 3.2.1.81 Agarivorans sp. QM38 ABM90422.1 A2TGZ5  
 APS56_09910   Algibacter alginicilyticus HZ22 ALJ05413.1    
 CDL62_09370   Alkalitalea saponilacus DSM 24412 ASB49335.1    
 AVL56_03045   Alteromonas addita R10SW13 AMJ93379.1    
 AVL56_03065   Alteromonas addita R10SW13 AMJ93382.1    
 β-agarase (neoagarobiose-producing) 3.2.1.81 Alteromonas sp. E-1 BAE97587.1 Q14UU1  
 AV939_03360   Alteromonas sp. Mac1 AMJ85705.1    
 AV939_03340   Alteromonas sp. Mac1 AMJ85702.1    
 AV940_03205   Alteromonas sp. Mac2 AMJ89565.1    
 AV940_03185   Alteromonas sp. Mac2 AMJ89562.1    
 AOR13_2906   Alteromonas stellipolaris LMG 21856 ALM91910.1    
 AOR13_2901   Alteromonas stellipolaris LMG 21856 ALM91905.1    
 AVL57_04270   Alteromonas stellipolaris LMG 21861 AMJ73260.1    
 AVL57_04290   Alteromonas stellipolaris LMG 21861 AMJ73263.1    
 A6K25_01510   Alteromonas stellipolaris PQQ-42 ANB20076.1    
 A6K25_01490   Alteromonas stellipolaris PQQ-42 ANB20073.1    
 A6F57_13005   Alteromonas stellipolaris PQQ-44 ANB26030.1    
 A6F57_12985   Alteromonas stellipolaris PQQ-44 ANB26027.1    
 NIES21_07170   Anabaenopsis circularis NIES-21 BAY14931.1    
 ACG10_12935   Azotobacter chroococcum B3 ASL27092.1    
 Achr_15560 (AgaA)   Azotobacter chroococcum NCIMB 8003 AJE21015.1    
 AvCA_19460 (AgaA)   Azotobacter vinelandii CA AGK13218.1    
 AvCA6_19460 (AgaA)   Azotobacter vinelandii CA6 AGK17502.1    
 Avin_19460 (AgaA)   Azotobacter vinelandii DJ ATCC BAA-1303 ACO78156.1 C1DEH1  
 BRDCF_06885   Bacteroidales bacterium CF AGX08384.1
AGY53973.1
   
 BcellWH2_03003   Bacteroides cellulosilyticus WH2 ALJ60241.1    
 BcellWH2_02359   Bacteroides cellulosilyticus WH2 ALJ59599.1    
 Bovatus_02308   Bacteroides ovatus ATCC 8483 ALJ46941.1    
 Bovatus_03896 (fragment)   Bacteroides ovatus ATCC 8483 ALJ48499.1    
 Bovatus_02307   Bacteroides ovatus ATCC 8483 ALJ46940.1    
 BACOV975_00096   Bacteroides ovatus V975 SCV06348.1    
 BACOV975_00095   Bacteroides ovatus V975 SCV06347.1    
 BACPLE_01683 (BpGH50)   Bacteroides plebeius DSM 17135 EDY95417.1   5T3B[A,B]
 BXY_48270   Bacteroides xylanisolvens XB1A CBK69674.1 D6D6H1  
 BXY_10640   Bacteroides xylanisolvens XB1A CBK66218.1 D6D873  
 BXY_10650   Bacteroides xylanisolvens XB1A CBK66219.1 D6D874  
 BARVI_03030   Barnesiella viscericola DSM 18177 AHF13634.1    
 GS08_09935   Bifidobacterium longum BXY01 AIF91390.1    
 BLJ_1916   Bifidobacterium longum subsp. longum JDM301 ADH01339.1 D6ZWT3  
 BVIRIDIS_27890 (fragment)   Blastochloris viridis CUU43763.1    
 BVIR_23 (fragment)   Blastochloris viridis ATCC 19567 ALK07841.1    
 BV133_1320 (fragment)   Blastochloris viridis DSM 133 BAR98913.1    
 NK6_8969 (fragment)   Bradyrhizobium diazoefficiens NK6 BAR62113.1    
 AAV28_20550 (fragment)   Bradyrhizobium diazoefficiens USDA 110 AND89921.1    
 bll4656   Bradyrhizobium diazoefficiens USDA 110 NP_771296.1
BAC49921.1
Q89L92  
 S23_36460 (fragment)   Bradyrhizobium sp. S23321 BAL76845.1    
 Acid_0712   Candidatus Solibacter usitatus Ellin6076 ABJ81713.1 Q02B53  
 CCALI_02040   Chthonomonas calidirosea T49 CCW35847.1    
 CCALI_00922   Chthonomonas calidirosea T49 CCW34745.1    
 CCALI_01838   Chthonomonas calidirosea T49 CCW35650.1    
 AgaW   Cohnella sp. LGH AKV62624.1    
 Caka_0369   Coraliomargarita akajimensis DSM 45221 ADE53394.1 D5EMI8  
 cce_2986   Cyanothece sp. ATCC 51142 ACB52334.1 B1WW01  
 DEHRE_09815   Dehalobacter restrictus DSM 9455 PER-K23 AHF11385.1    
 DEHRE_09830   Dehalobacter restrictus DSM 9455 PER-K23 AHF11388.1    
 DMR_13050   Desulfovibrio magneticus RS-1 BAH74796.1 C4XMK5  
 HY57_05545   Dyella japonica A8 AIF46763.1    
 CH75_17500   Dyella jiangningensis SBZ 3-12 AHX14790.1    
 OP10G_2040   Fimbriimonas ginsengisoli Gsoil 348 AIE85408.1    
 agarase GM002660   Flammeovirga pacifica WPAGA1 ART28001.1    
 AgaO   Flammeovirga sp. MY04 AME16507.1
ANQ50455.1
   
 BB050_02351   Flavobacterium johnsoniae GSE09 AOC95464.1    
 Fjoh_2081   Flavobacterium johnsoniae UW101 ABQ05111.1 A5FI56  
 FORMA_02500 (fragment)   Formosa sp. Hel3_A1_48 AOR25445.1    
 Glaag_1632   Glaciecola sp. 4H-3-7+YE-5 AEE22588.1    
 Glaag_1634   Glaciecola sp. 4H-3-7+YE-5 AEE22590.1    
 Glaag_2339   Glaciecola sp. 4H-3-7+YE-5 AEE23284.1    
 Glaag_2954   Glaciecola sp. 4H-3-7+YE-5 AEE23891.1    
 A0257_10845   Hymenobacter sp. PAMC 26554 AMR27544.1    
 Hsw_2830   Hymenobacter swuensis DY53 AHJ98425.1    
 Lbys_0351   Leadbetterella byssophila DSM 17132 ADQ16129.1 E4RVE3  
 Lbys_2130   Leadbetterella byssophila DSM 17132 ADQ17826.1 E4RUD5  
 BJI69_10220   Luteibacter rhizovicinus LJ96T APG04231.1    
 Mahau_1328   Mahella australiensis 50-1 BON AEE96522.1    
 MROS_0970   Melioribacter roseus P3M-2 AFN74211.1    
 Mag101_05935   Microbulbifer agarilyticus GP101 AQQ69412.1    
 Mag101_06020   Microbulbifer agarilyticus GP101 AQQ69415.1    
 Mag101_06025   Microbulbifer agarilyticus GP101 AQQ67243.1    
 Mag101_02005   Microbulbifer agarilyticus GP101 AQQ66553.1    
 A3224_10080   Microbulbifer thermotolerans DAU221 AMX02879.1    
 A3224_10230   Microbulbifer thermotolerans DAU221 AMX04183.1    
 BJP36_32815   Moorea producens JHB AOY84000.1    
 BJP34_32725   Moorea producens PAL-8-15-08-1 AOX03565.1    
 OPIT5_04340   Opitutaceae bacterium TAV5 AHF89577.1    
 OPIT5_04380   Opitutaceae bacterium TAV5 AHF89585.1    
 OPIT5_10400   Opitutaceae bacterium TAV5 AHF90550.1    
 OPIT5_13800   Opitutaceae bacterium TAV5 AHF91120.1    
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