Glycoside Hydrolase Family 50

Activities in Familyβ-agarase (EC 3.2.1.81).
Mechanism probably retaining
ClanGH-A
Catalytic Nucleophile/BaseGlu (inferred)
Catalytic Proton DonorGlu (inferred)
External resourcesCAZypedia;
Statistics GenBank accession (1029); Uniprot accession (56); PDB accession (6); 3D entries (3); cryst (0)
All (1010) Archaea (7) Bacteria (1003) Structure (3) Characterized (21)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | ... | 11 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 ALSL_2081   Aerosticca soli Dysh456 BBD80712.1    
 AgaB   Agarivorans albus HD AGE97354.1    
 β-agarase (AgaA34) (peptide fragment) 3.2.1.81 Agarivorans albus YKW-34 P85974.1    
 β-agarase (Wh50B)   Agarivorans gilvus WH0801 AQT38174.1    
 neoagarotetraose-producing β-agarase (exo-type) (AgWH50A) 3.2.1.81 Agarivorans gilvus WH0801 AFP32918.1    
 β-agarase (AgWH50C) (neoagarobiose-producing) 3.2.1.81 Agarivorans gilvus WH0801 AHM94172.1   5Z6P[A,B]
 β-agarase (AgrA) (neoagarotetraose- and neoagarobiose-producing) 3.2.1.81 Agarivorans sp. AG17 ACU52709.1 D3GCV0  
 AgaB   Agarivorans sp. HS AGE97355.1    
 agarase (Hz1;HZ-a;HZ-b;HZ-c) 3.2.1.81 Agarivorans sp. HZ105 ADY17918.1    
 β-agarase (Hz2) (neoagarotetraose-producing) 3.2.1.81 Agarivorans sp. HZ105 ADY17919.1    
 β-agarase (neoagarobiose-producing) 3.2.1.81 Agarivorans sp. JA-1 ABK97391.1 A1E2A6  
 β-agarase (AgaA11) (neoagarobiose-producing) 3.2.1.81 Agarivorans sp. JAMB-A11 BAD99519.1 Q4W8F0  
 AgaB   Agarivorans sp. JL AGE97353.1    
 β-agarase (AgaD01)   Agarivorans sp. QM38 ABK51379.1 A0MWB7  
 β-agarase (AgaD02) 3.2.1.81 Agarivorans sp. QM38 ABM90422.1 A2TGZ5  
 APS56_09910   Algibacter alginicilyticus HZ22 ALJ05413.1    
 CDL62_09370   Alkalitalea saponilacus DSM 24412 ASB49335.1    
 AVL56_03045   Alteromonas addita R10SW13 AMJ93379.1    
 AVL56_03065   Alteromonas addita R10SW13 AMJ93382.1    
 ALFOR1_30559   Alteromonas macleodii CAB9493635.1    
 ALFOR1_30601   Alteromonas macleodii CAB9493675.1    
 ALFOR1_30573 (AgaB)   Alteromonas macleodii CAB9493649.1    
 β-agarase (neoagarobiose-producing) 3.2.1.81 Alteromonas sp. E-1 BAE97587.1 Q14UU1  
 AV939_03360   Alteromonas sp. Mac1 AMJ85705.1    
 AV939_03340   Alteromonas sp. Mac1 AMJ85702.1    
 AV940_03205   Alteromonas sp. Mac2 AMJ89565.1    
 AV940_03185   Alteromonas sp. Mac2 AMJ89562.1    
 AOR13_2906   Alteromonas stellipolaris LMG 21856 ALM91910.1    
 AOR13_2901   Alteromonas stellipolaris LMG 21856 ALM91905.1    
 AVL57_04270   Alteromonas stellipolaris LMG 21861 AMJ73260.1    
 AVL57_04290   Alteromonas stellipolaris LMG 21861 AMJ73263.1    
 A6K25_01510   Alteromonas stellipolaris PQQ-42 ANB20076.1    
 A6K25_01490   Alteromonas stellipolaris PQQ-42 ANB20073.1    
 A6F57_13005   Alteromonas stellipolaris PQQ-44 ANB26030.1    
 A6F57_12985   Alteromonas stellipolaris PQQ-44 ANB26027.1    
 NIES21_07170   Anabaenopsis circularis NIES-21 BAY14931.1    
 bsdcttw_29930   Anaerocolumna sp. CTTW BCJ99952.1    
 STSP2_02317   Anaerohalosphaera lusitana ST-NAGAB-D1 AQT69130.1    
 OJF2_74910   Aquisphaera giovannonii OJF2 QEH38881.1    
 ACG10_12935   Azotobacter chroococcum B3 ASL27092.1    
 Achr_15560 (AgaA)   Azotobacter chroococcum NCIMB 8003 AJE21015.1    
 AvCA_19460 (AgaA)   Azotobacter vinelandii CA AGK13218.1    
 AvCA6_19460 (AgaA)   Azotobacter vinelandii CA6 AGK17502.1    
 Avin_19460 (AgaA)   Azotobacter vinelandii DJ ATCC BAA-1303 ACO78156.1 C1DEH1  
 NCTC4824_03994   Bacillus lentus NCTC4824 SQI63245.1    
 BRDCF_06885   Bacteroidales bacterium CF AGX08384.1
AGY53973.1
   
 BcellWH2_03003   Bacteroides cellulosilyticus WH2 ALJ60241.1    
 BcellWH2_02359   Bacteroides cellulosilyticus WH2 ALJ59599.1    
 DXK01_006000   Bacteroides intestinalis APC919/174 QDO68502.1    
 DYI28_23035   Bacteroides ovatus 3725 D1 iv QDM11346.1    
 DYI28_13335   Bacteroides ovatus 3725 D1 iv QDM12614.1    
 DYI28_13330   Bacteroides ovatus 3725 D1 iv QDM09624.1    
 Bovatus_02308   Bacteroides ovatus ATCC 8483 ALJ46941.1    
 Bovatus_03896 (fragment)   Bacteroides ovatus ATCC 8483 ALJ48499.1    
 Bovatus_02307   Bacteroides ovatus ATCC 8483 ALJ46940.1    
 FOC41_13570   Bacteroides ovatus FDAARGOS_733 QGT71933.1    
 FOC41_13575   Bacteroides ovatus FDAARGOS_733 QGT71934.1    
 FOC41_20635   Bacteroides ovatus FDAARGOS_733 QGT73212.1    
 BACOV975_00096   Bacteroides ovatus V975 SCV06348.1    
 BACOV975_00095   Bacteroides ovatus V975 SCV06347.1    
 BACPLE_01683 (BpGH50)   Bacteroides plebeius DSM 17135 EDY95417.1   5T3B[A,B]
 H8796_00500   Bacteroides sp. M10 QNL39155.1    
 H8796_00505   Bacteroides sp. M10 QNL39156.1    
 FKZ68_00380   Bacteroides xylanisolvens H207 QDH57474.1    
 FKZ68_08075   Bacteroides xylanisolvens H207 QDH54192.1    
 FKZ68_26105   Bacteroides xylanisolvens H207 QDH57425.1    
 FKZ68_00375   Bacteroides xylanisolvens H207 QDH52805.1    
 BXY_48270   Bacteroides xylanisolvens XB1A CBK69674.1 D6D6H1  
 BXY_10640   Bacteroides xylanisolvens XB1A CBK66218.1 D6D873  
 BXY_10650   Bacteroides xylanisolvens XB1A CBK66219.1 D6D874  
 BARVI_03030   Barnesiella viscericola DSM 18177 AHF13634.1    
 GS08_09935   Bifidobacterium longum BXY01 AIF91390.1    
 BLJ_1916   Bifidobacterium longum subsp. longum JDM301 ADH01339.1 D6ZWT3  
 BLTE_32840 (fragment)   Blastochloris tepida GI BBF94599.1    
 BVIRIDIS_27890 (fragment)   Blastochloris viridis CUU43763.1    
 BVIR_23 (fragment)   Blastochloris viridis ATCC 19567 ALK07841.1    
 BV133_1320 (fragment)   Blastochloris viridis DSM 133 BAR98913.1    
 FNV92_30035 (fragment)   Bradyrhizobium sp. 58S1 QDP26148.1    
 Bdiaspc4_24390   Bradyrhizobium diazoefficiens 110spc4 QBP23434.1    
 HUW42_22315 (fragment)   Bradyrhizobium diazoefficiens 113-2 QLD43551.1    
 F07S3_51980 (fragment)   Bradyrhizobium diazoefficiens F07S3 BBZ95365.1    
 H12S4_53760 (fragment)   Bradyrhizobium diazoefficiens H12S4 BCA04472.1    
 BDHF08_48960 (fragment)   Bradyrhizobium diazoefficiens HF08 BCA13049.1    
 BDHH15_50440 (fragment)   Bradyrhizobium diazoefficiens HH15 BCA21829.1    
 NK6_8969 (fragment)   Bradyrhizobium diazoefficiens NK6 BAR62113.1    
 AAV28_20550 (fragment)   Bradyrhizobium diazoefficiens USDA 110 AND89921.1    
 bll4656   Bradyrhizobium diazoefficiens USDA 110 NP_771296.1
BAC49921.1
Q89L92  
 DI395_25895 (fragment)   Bradyrhizobium diazoefficiens XF7 QJS41016.1    
 X265_27600   Bradyrhizobium guangdongense CCBAU 51649 QAU41027.1    
 FJN17_19670   Bradyrhizobium sp. 3 65S1MB QDF39597.1    
 ACH79_26450 (fragment)   Bradyrhizobium sp. CCBAU 051011 QHO75643.1    
 EI171_30865   Bradyrhizobium sp. LCT2 QHP71294.1    
 S23_36460 (fragment)   Bradyrhizobium sp. S23321 BAL76845.1    
 HAV00_16970 (fragment)   Bradyrhizobium symbiodeficiens 101S1MB QIP07850.1    
 HAU86_20655 (fragment)   Bradyrhizobium symbiodeficiens 141S2 QIP02038.1    
 CIT39_22960   Bradyrhizobium symbiodeficiens 3 85S1MB AWM09013.1    
 Acid_0712   Candidatus Solibacter usitatus Ellin6076 ABJ81713.1 Q02B53  
 β-agarase   Catenovulum agarivorans YM01 AVL95506.1    
 agarase Q13   Catenovulum maritimum AYW35329.1    
 agarase Q14   Catenovulum maritimum AYW35330.1    
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