Glycoside Hydrolase Family 50

Activities in Family	β-galactosidase (EC 3.2.1.23); β-agarase (EC 3.2.1.81);
Mechanism	Retaining (inferred) e
Clan	GH-A
3D Structure Status	( β / α ) ₈ barrel
Catalytic Nucleophile/Base	Glu (inferred)
Catalytic Proton Donor	Glu (inferred)
External resources	CAZypedia;
Statistics	GenBank accession (1828); Uniprot accession (20); PDB accession (7); 3D entries (4); cryst (0)

Summary

Download GH50 (1800) Taxonomic display Structure (4) Characterized (38)

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Bacteria
Protein Name	EC#	Organism	GenBank	Uniprot	PDB/3D
PXH66_18340 (fragment)		Synoicihabitans lomoniglobus LMO-M01	WED64301.1
Sfum_3553		Syntrophobacter fumaroxidans MPOB	ABK19223.1
FIU28_00515 (fragment)		Tardiphaga sp. vice154	QDM19798.1
FNL53_00715 (fragment)		Tardiphaga sp. vice278	QDM14640.1
FNL56_00615 (fragment)		Tardiphaga sp. vice304	QDM24818.1
FNL55_00710 (fragment)		Tardiphaga sp. vice352	QDM30028.1
KIH39_18915 (fragment)		Telmatocola sphagniphila SP2T	QVL30908.1
TJEJU_2945 (AgaY)		Tenacibaculum jejuense KCTC 22618	SNR16614.1
TJEJU_2948 (AgaW)		Tenacibaculum jejuense KCTC 22618	SNR16617.1
β-agarase (neoagarobiose-producing) (AgaB1)	3.2.1.81	Thalassotalea agarivorans BCRC17492 / TMA1 / JCM 13379	AGT98631.1	U3GSN9
E2K93_07440		Thalassotalea sp. HSM 43	QBY04230.1
THTE_2856		Thermogutta terrifontis R1	ASV75458.1
GT409_13000		Tichowtungia aerotolerans S-5007	QHI70319.1
GT409_13095		Tichowtungia aerotolerans S-5007	QHI70338.1
β-agarase (AguC;AguI;AguL) (fragment)		uncultured bacterium	AAP70389.1 AAP49314.1 AAP70366.1
β-agarase B (AguA;AguE)		uncultured bacterium	AAP49347.1 AAP49317.1
β-agarase (AguJ)		uncultured bacterium	AAP70364.1
β-agarase (AguG) (fragment)		uncultured bacterium	AAP70388.1
β-agarase		uncultured bacterium	AXP07842.1
β-agarase		uncultured bacterium	AXP07838.1
β-agarase		uncultured bacterium	AXP07843.1
β-agarase		uncultured bacterium	AXP07832.1
β-agarase		uncultured bacterium	AXP07844.1
β-agarase		uncultured bacterium	AXP07845.1
β-agarase		uncultured bacterium	AXP07840.1
β-agarase		uncultured bacterium	AXP07841.1
HZI73_10505		Vallitalea pronyensis FatNI3	QUI22698.1
HZI73_25510		Vallitalea pronyensis FatNI3	QUI25447.1
HZI73_25505		Vallitalea pronyensis FatNI3	QUI25446.1
IMCC26134_01705 (fragment)		Verrucomicrobia bacterium IMCC26134	AKC81805.1
IMCC26134_03020		Verrucomicrobia bacterium IMCC26134	AKC82005.1
EGM51_04835		Verrucomicrobia bacterium S94	QBG46750.1
EGM51_05270		Verrucomicrobia bacterium S94	QBG46833.1
EGM51_00075		Verrucomicrobia bacterium S94	QBG45884.1
EGM51_04780		Verrucomicrobia bacterium S94	QBG46742.1
CMV30_07365		Verrucomicrobiota bacterium HZ-65	ATC63785.1
SAMN05444156_1007		Verrucomicrobium sp. GAS474	SDT95096.1
SAMN05444156_1729		Verrucomicrobium sp. GAS474	SDU06021.1
SAMN05444156_2439		Verrucomicrobium sp. GAS474	SDU17932.1
SAMN05444156_1542		Verrucomicrobium sp. GAS474	SDU02961.1
GT360_06770		Vibrio astriarenae HN897	QIA63234.1
GT360_06775		Vibrio astriarenae HN897	QIA63235.1
GT360_06795		Vibrio astriarenae HN897	QIA63239.1
GT360_06780		Vibrio astriarenae HN897	QIA63236.1
HPK20_15255		Vibrio fluvialis A8	QKE35866.1
HPK20_15040		Vibrio fluvialis A8	QKE35833.1
HPK20_15265		Vibrio fluvialis A8	QKE35868.1
HPK20_15260		Vibrio fluvialis A8	QKE35867.1
agarase		Vibrio natriegens W3418	WDV18546.1
agarase		Vibrio natriegens W3419	WDV18547.1
agarase		Vibrio natriegens W3420	WKW83329.1
agarase		Vibrio natriegens W3472	WDV18548.1
exo-agarase (Aga3420; MTP21_RS17780)	3.2.1.81	Vibrio natriegens WPAGA4	WP_014232192.1
agarase		Vibrio sp. BY	AIW39921.1
β-agarase rAgaZC-1		Vibrio sp. CICC 24670	QCE21331.1
β-agarase (Aga41A) (neoagarotetraose-producing)	3.2.1.81	Vibrio sp. CN41	ADM25828.1	G3CHF0
β-agarase (VEJY3_09145; VejGH50A)	3.2.1.81	Vibrio sp. EJY3	AEX22315.1
β-agarase (VEJY3_09155; VejGH50C)	3.2.1.81	Vibrio sp. EJY3	AEX22317.1
β-agarase (VEJY3_09425; VejGH50D)	3.2.1.81	Vibrio sp. EJY3	AEX22367.1
β-agarase (VEJY3_09150; VejGH50B)	3.2.1.81	Vibrio sp. EJY3	AEX22316.1
β-agarase A (AgaA;0107)	3.2.1.81	Vibrio sp. JT0107	BAA03541.1	P48839
exo-β-agarase B (AgaB) (neoagarobiose-producing)	3.2.1.81	Vibrio sp. JT0107	BAA04744.1	P48840
AgaA		Vibrio sp. LA1	AEB71854.1
MAO6_36070		Vibrio sp. MAO6	BFG50096.1
MAO6_36340		Vibrio sp. MAO6	BFG50123.1
MAO6_36170		Vibrio sp. MAO6	BFG50106.1
MAO6_42280		Vibrio sp. MAO6	BFG50717.1
β-agarase E (agarase-E;AgaE)		Vibrio sp. PO-303	BAG71428.1
β-agarase B (agarase-B;AgaB)	3.2.1.81	Vibrio sp. PO-303	BAG71427.1	B5MEI9
J4N45_24375		Vibrio sp. SCSIO 43140	USD62503.1
J4N45_24450		Vibrio sp. SCSIO 43140	USD62517.1
J4N45_24455		Vibrio sp. SCSIO 43140	USD62518.1
VspSTUT11_12770		Vibrio sp. STUT-A11	BDR13301.1
VspSTUT11_13290		Vibrio sp. STUT-A11	BDR13353.1
VspSTUT11_13300		Vibrio sp. STUT-A11	BDR13354.1
VspSTUT11_13280		Vibrio sp. STUT-A11	BDR13352.1
VspSTUT16_12850		Vibrio sp. STUT-A16	BDR17939.1
VspSTUT16_13270		Vibrio sp. STUT-A16	BDR17981.1
VspSTUT16_13280		Vibrio sp. STUT-A16	BDR17982.1
VspSTUT16_13290		Vibrio sp. STUT-A16	BDR17983.1
β-agarase (AgaWG1)		Vibrio sp. WGMA1	WOC95092.1
VVA1175		Vibrio vulnificus YJ016	BAC97201.1 NP_937231.1
C5Q97_17400		Victivallales bacterium CCUG 44730	AVM46385.1
C5Q97_21430		Victivallales bacterium CCUG 44730	AVM47142.1
C5Q97_07510		Victivallales bacterium CCUG 44730	AVM44573.1
C5Q97_20845		Victivallales bacterium CCUG 44730	AVM47036.1
C5Q97_20860		Victivallales bacterium CCUG 44730	AVM47039.1
C5Q97_11870		Victivallales bacterium CCUG 44730	AVM45357.1
β-galactosidase (VadG925; Vvad_PD3900)	3.2.1.23	Victivallis vadensis ATCC BAA-548	EFB02686.1 ZP_01923925.1
AXE80_10390		Wenyingzhuangia fucanilytica CZ1127	ANW96656.1
AXE80_12920		Wenyingzhuangia fucanilytica CZ1127	ANW97131.1
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