Glycoside Hydrolase Family 50

Activities in Familyβ-agarase (EC 3.2.1.81).
Mechanism probably retaining
ClanGH-A
Catalytic Nucleophile/BaseGlu (inferred)
Catalytic Proton DonorGlu (inferred)
External resourcesCAZypedia;
Statistics GenBank accession (584); Uniprot accession (56); PDB accession (5); 3D entries (2); cryst (0)
All (565) Archaea (6) Bacteria (559) Structure (2) Characterized (23)
| 1 | 2 | 3 | 4 | 5 | 6 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 BJI69_10220   Luteibacter rhizovicinus LJ96T APG04231.1    
 Mahau_1328   Mahella australiensis 50-1 BON AEE96522.1    
 MROS_0970   Melioribacter roseus P3M-2 AFN74211.1    
 Mag101_05935   Microbulbifer agarilyticus GP101 AQQ69412.1    
 Mag101_06020   Microbulbifer agarilyticus GP101 AQQ69415.1    
 Mag101_06025   Microbulbifer agarilyticus GP101 AQQ67243.1    
 Mag101_02005   Microbulbifer agarilyticus GP101 AQQ66553.1    
 A3224_10080   Microbulbifer thermotolerans DAU221 AMX02879.1    
 A3224_10230   Microbulbifer thermotolerans DAU221 AMX04183.1    
 BJP36_32815   Moorea producens JHB AOY84000.1    
 BJP34_32725   Moorea producens PAL-8-15-08-1 AOX03565.1    
 D806_004600   Mycolicibacterium smegmatis MKD8 AWT51453.1    
 NIES2109_37100   Nostoc sp. HK-01 NIES-2109 BBD60910.1    
 OPIT5_04340   Opitutaceae bacterium TAV5 AHF89577.1    
 OPIT5_04380   Opitutaceae bacterium TAV5 AHF89585.1    
 OPIT5_10400   Opitutaceae bacterium TAV5 AHF90550.1    
 OPIT5_13800   Opitutaceae bacterium TAV5 AHF91120.1    
 OPIT5_23910   Opitutaceae bacterium TAV5 AHF92780.1    
 OPIT5_26290   Opitutaceae bacterium TAV5 AHF93203.1    
 OPIT5_28630   Opitutaceae bacterium TAV5 AHF93567.1    
 OPIT5_07575   Opitutaceae bacterium TAV5 AHF90105.1    
 β-agarase AgaB-4 3.2.1.81 Paenibacillus agarexedens BCRC 16000 AVV48109.1    
 PBOR_13835   Paenibacillus borealis DSM 13188 AIQ57890.1    
 PBOR_28860   Paenibacillus borealis DSM 13188 AIQ60509.1    
 PM3016_2716   Paenibacillus mucilaginosus 3016 AFC29596.1    
 PM3016_2602   Paenibacillus mucilaginosus 3016 AFC29484.1    
 PM3016_6564   Paenibacillus mucilaginosus 3016 AFC33187.1    
 PM3016_6563   Paenibacillus mucilaginosus 3016 AFC33186.1    
 PM3016_266   Paenibacillus mucilaginosus 3016 AFC27244.1    
 PM3016_262   Paenibacillus mucilaginosus 3016 AFC27240.1    
 B2K_13755   Paenibacillus mucilaginosus K02 AFH61769.1
AFK65387.1
   
 B2K_33150   Paenibacillus mucilaginosus K02 AFH65498.1    
 B2K_33155   Paenibacillus mucilaginosus K02 AFH65499.1
AFK65197.1
   
 B2K_01355   Paenibacillus mucilaginosus K02 AFH59384.1    
 B2K_01335   Paenibacillus mucilaginosus K02 AFH59380.1
AFH59380.2
   
 B2K_07825 (fragment)   Paenibacillus mucilaginosus K02 AFH60629.1
AFK65269.1
   
 B2K_39205   Paenibacillus mucilaginosus K02 AGN70665.1    
 KNP414_00310   Paenibacillus mucilaginosus KNP414 AEI38935.1    
 KNP414_02334   Paenibacillus mucilaginosus KNP414 AEI40895.1    
 KNP414_06971   Paenibacillus mucilaginosus KNP414 AEI45483.1    
 KNP414_06972   Paenibacillus mucilaginosus KNP414 AEI45484.1    
 KNP414_00305   Paenibacillus mucilaginosus KNP414 AEI38930.1    
 KNP414_02457   Paenibacillus mucilaginosus KNP414 AEI41018.1    
 CD191_22095   Paenibacillus odorifer CBA7130 AWV35106.1    
 PODO_22460   Paenibacillus odorifer DSM 15391 AIQ75804.1    
 H70357_25590   Paenibacillus sp. FSL H7-0357 AIQ19711.1    
 R50345_22340   Paenibacillus sp. FSL R5-0345 AIQ37144.1    
 R70331_21950   Paenibacillus sp. FSL R7-0331 AIQ53931.1    
 SY83_13365   Paenibacillus swuensis DY6 ANE47087.1    
 ING2E5A_1064 (AgaA)   Petrimonas mucosa DSM 28695 SCM56829.1    
 H744_1c0293   Photobacterium gaetbulicola Gung47 AJR05318.1    
 H744_1c0295   Photobacterium gaetbulicola Gung47 AJR05320.1    
 PSMK_29280   Phycisphaera mikurensis NBRC 102666 BAM05087.1    
 PSMK_14930   Phycisphaera mikurensis NBRC 102666 BAM03652.1    
 STSP2_02317   Phycisphaerae bacterium ST-NAGAB-D1 AQT69130.1    
 VT85_02320   Planctomyces sp. SH-PL62 AMV36250.1    
 BTO15_18125   Polaribacter sejongensis KCTC 23670 AUC24144.1    
 BTO15_18040   Polaribacter sejongensis KCTC 23670 AUC23879.1    
 PAGA_a1712   Pseudoalteromonas agarivorans DSM 14585 ATC82082.1    
 PAGA_a1700   Pseudoalteromonas agarivorans DSM 14585 ATC82071.1    
 PAGA_a1721   Pseudoalteromonas agarivorans DSM 14585 ATC82091.1    
 PARC_a2152   Pseudoalteromonas arctica A 37-1-2 ATC86675.1    
 PARC_a2212   Pseudoalteromonas arctica A 37-1-2 ATC86723.1    
 PARC_a2177   Pseudoalteromonas arctica A 37-1-2 ATC86695.1    
 Patl_1971   Pseudoalteromonas atlantica T6c ABG40489.1 Q15UE9  
 Patl_2640   Pseudoalteromonas atlantica T6c ABG41153.1 Q15SI5  
 Patl_2642   Pseudoalteromonas atlantica T6c ABG41155.1 Q15SI3  
 AOR04_08300   Pseudoalteromonas sp. 1_2015MBL_MicDiv ATG79263.1    
 AOR04_08215   Pseudoalteromonas sp. 1_2015MBL_MicDiv ATG77516.1    
 AOR04_08085   Pseudoalteromonas sp. 1_2015MBL_MicDiv ATG79259.1    
 D172_009480   Pseudoalteromonas sp. Bsw20308 ALQ09764.1    
 D172_009255   Pseudoalteromonas sp. Bsw20308 ALQ09758.1    
 D172_009335   Pseudoalteromonas sp. Bsw20308 ALQ08241.1    
 AgaH91   Pseudoalteromonas sp. H9 / KCTC23887 AJW83677.1    
 agarase   Pseudoalteromonas sp. NJ-21 API65089.1    
 β-agarase (Aga21) (neoagarobiose-producing) 3.2.1.81 Pseudoalteromonas sp. NJ21 AHC72907.1    
 PA14OR_4110   Pseudomonas aeruginosa SCM64001.1    
 PERCYII10_4041   Pseudomonas aeruginosa SIP54283.1    
 PERCYII10_4041   Pseudomonas aeruginosa SIP54283.1    
 AU380_27725   Pseudomonas aeruginosa 12-4-4(59) ALU51471.1    
 CD800_12360   Pseudomonas aeruginosa 1207 ASD09846.1    
 CDG41_23690   Pseudomonas aeruginosa 124 ASA31059.1    
 CD799_12500   Pseudomonas aeruginosa 1242 ASD16649.1    
 CD797_24455   Pseudomonas aeruginosa 127 ASD05482.1    
 CDL16_25120   Pseudomonas aeruginosa 58 ASA17267.1    
 PA8380_43890   Pseudomonas aeruginosa 8380 BAR69210.1    
 CD796_21885   Pseudomonas aeruginosa 84 ASC99009.1    
 AES1R_01940   Pseudomonas aeruginosa AES-1R ALT70454.1    
 CSC26_2258 (AgaA) (fragment)   Pseudomonas aeruginosa AR439 AWE98129.1    
 CSC26_2257 (fragment)   Pseudomonas aeruginosa AR439 AWE97155.1    
 CSC29_4033   Pseudomonas aeruginosa AR442 AWE85024.1    
 CSC31_0657   Pseudomonas aeruginosa AR444 AWE81671.1    
 CSC32_4855   Pseudomonas aeruginosa AR445 AWE70094.1    
 AM474_24090   Pseudomonas aeruginosa AR_0095 AVN46452.1    
 AM489_21690   Pseudomonas aeruginosa AR_0110 AWS91509.1    
 CSB85_3244   Pseudomonas aeruginosa AR_0230 AVK26408.1    
 CSB90_2091   Pseudomonas aeruginosa AR_0353 AVK22157.1    
 CSB91_2382   Pseudomonas aeruginosa AR_0354 AVK13470.1    
 CSB94_3992   Pseudomonas aeruginosa AR_0357 AVJ97254.1    
 CSB97_3081   Pseudomonas aeruginosa AR_0360 AVJ95536.1    
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