Glycoside Hydrolase Family 50

Activities in Familyβ-agarase (EC 3.2.1.81).
Mechanism probably retaining
ClanGH-A
Catalytic Nucleophile/BaseGlu (inferred)
Catalytic Proton DonorGlu (inferred)
External resourcesCAZypedia;
Statistics GenBank accession (619); Uniprot accession (56); PDB accession (5); 3D entries (2); cryst (0)
All (600) Archaea (6) Bacteria (594) Structure (2) Characterized (23)
| 1 | 2 | 3 | 4 | 5 | 6 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 AL527_05075   Pseudomonas fulva FDAARGOS_167 AVF54602.1    
 KF707C_16970   Pseudomonas furukawaii KF707 BAU73385.1    
 SAMN05216581_1763   Pseudomonas fuscovaginae LMG 2158 SEI06951.1    
 SAMN05216579_0942   Pseudomonas granadensis LMG 27940 SDS50390.1    
 PKB_1477   Pseudomonas knackmussii B13 CDF82839.1    
 SAMN04490189_1164   Pseudomonas koreensis BS3658 SDC99762.1    
 A8L59_06165   Pseudomonas koreensis CRS05-R5 ANH96989.1    
 AYO71_08905   Pseudomonas koreensis D26 AMT87659.1    
 PkP19E3_06300   Pseudomonas koreensis P19E3 AVX87960.1    
 DLD99_06885   Pseudomonas kribbensis 46-2 AXI60206.1    
 SAMN04490190_2588   Pseudomonas libanensis BS2975 SDK96874.1    
 SAMN04490191_5933   Pseudomonas lini BS3782 SDT65454.1    
 CLM75_06565   Pseudomonas lurida MYb11 AVJ37015.1    
 OU5_2189   Pseudomonas mandelii JR-1 AHZ69268.1    
 SAMN04489801_0686   Pseudomonas mandelii LMG 21607 SDU07370.1    
 AL532_01100   Pseudomonas monteilii FDAARGOS_171 AVH34992.1    
 X969_20300   Pseudomonas monteilii SB3078 AHC84183.1    
 X970_19935   Pseudomonas monteilii SB3101 AHC89554.1    
 APT63_15630   Pseudomonas monteilii USDA-ARS-USMARC-56711 AMA46929.1    
 SAMN04490196_0279   Pseudomonas moraviensis BS3668 SDU05783.1    
 CLJ08_06710   Pseudomonas mosselii BS011 ATB64319.1    
 O165_016785   Pseudomonas mosselii SJ10 AIN59853.1    
 SAMN05216202_3372   Pseudomonas mucidolens LMG 2223 SDV02722.1    
 NCTC8068_01235 (AgaB)   Pseudomonas mucidolens NCTC8068 SQH32278.1    
 SAMN04490197_5230   Pseudomonas orientalis BS2775 SDU35491.1    
 BOP93_06350   Pseudomonas orientalis F9 AUZ45226.1    
 SAMN05216221_1137   Pseudomonas oryzae KCTC 32247 SDS13109.1    
 CYL20_24495   Pseudomonas palleroniana MAB3 AVE07592.1    
 NJ69_02490   Pseudomonas parafulva CRS01-1 AIZ31966.1    
 DZC75_05205   Pseudomonas parafulva JBCS1880 AXO87447.1    
 B2J77_05135   Pseudomonas parafulva PRS09-11288 AQW67668.1    
 RK21_00391   Pseudomonas plecoglossicida NyZ12 AJG11899.1    
 DVB73_10250   Pseudomonas plecoglossicida XSDHY-P AXM96132.1    
 SAMN04490208_1901   Pseudomonas poae BS2776 SDN91471.1    
 H045_03425   Pseudomonas poae RE*1-1-14 AGE24761.1    
 SAMN05216296_2300   Pseudomonas pohangensis DSM 17875 SDU19040.1    
 SAMN05216222_1276   Pseudomonas prosekii LMG 26867 SDS35715.1    
 PPC_1334   Pseudomonas protegens Cab57 BAO60681.1    
 PFLCHA0_c13150 (AgaB)   Pseudomonas protegens CHA0 AGL83105.1    
 DWF74_22460   Pseudomonas protegens FD6 AXK56012.1    
 CEP86_01515   Pseudomonas protegens FDAARGOS_307 ASE19223.1    
 H78_01339   Pseudomonas protegens H78 AQT08042.1    
 PFL_1280   Pseudomonas protegens Pf-5 AAY90565.1 Q4KH74  
 SAMN04490201_1674   Pseudomonas psychrophila BS3667 SDU44502.1    
 AWT69_001186   Pseudomonas putida 1A00316 AMK29823.1    
 KKK_26760   Pseudomonas putida B6-2 ANC84411.1    
 PPUBIRD1_1172   Pseudomonas putida BIRD-1 ADR58854.1 E4R769  
 DW66_4526   Pseudomonas putida DLL-E4 AHZ79025.1    
 T1E_1863 (AgaB)   Pseudomonas putida DOT-T1E AFO47711.1    
 CR511_21415   Pseudomonas putida E41 ATP46462.1    
 CR512_21065   Pseudomonas putida E46 ATP51692.1    
 Pput_1162   Pseudomonas putida F1 ABQ77323.1 A5VZL3  
 PputGB1_4289   Pseudomonas putida GB-1 ABZ00178.1 B0KUB2  
 L483_25805   Pseudomonas putida H8234 AGN80240.1    
 B479_20720   Pseudomonas putida HB3267 PC9 AGA75034.1    
 IEC33019_2340   Pseudomonas putida IEC33019 ANY87887.1    
 Q5O_05860   Pseudomonas putida JB AOX07933.1    
 DKY63_26025   Pseudomonas putida JBC17 AWY43186.1    
 KF715C_ch46650   Pseudomonas putida KF715 BAW25238.1    
 PP1126   Pseudomonas putida KT2440 AAN66751.1
NP_743287.1
Q88NS8  
 SAMN05216501_2197   Pseudomonas putida N1R SIR83791.1    
 PP4_10670   Pseudomonas putida NBRC 14164 BAN52920.1    
 YSA_07314   Pseudomonas putida ND6 AFK70726.1    
 C1S65_06765   Pseudomonas putida NX-1 AXA23840.1    
 AB688_08770   Pseudomonas putida PC2 ANC02221.1    
 BG030_20965   Pseudomonas putida PP112420 APF00307.1    
 RPPX_03515   Pseudomonas putida S12 AJA12438.1    
 N805_28100   Pseudomonas putida S13.1.2 AJQ50881.1    
 PPS_4135   Pseudomonas putida S16 AEJ14674.1    
 CWR53_05640   Pseudomonas putida SGAir0191 AUA32121.1    
 A210_05615   Pseudomonas putida SJTE-1 ANI02123.1    
 PputW619_1147   Pseudomonas putida W619 ACA71652.1 B1J1C1  
 SAMN04490202_1310   Pseudomonas reinekei BS3776 SDO58028.1    
 PCA10_15960   Pseudomonas resinovorans NBRC 106553 BAN47328.1    
 SAMN04490209_3611   Pseudomonas rhodesiae BS2777 SDV12329.1    
 PMA3_05240   Pseudomonas silesiensis A3 ANJ54602.1    
 PS417_06515   Pseudomonas simiae WCS417 AIB35233.1    
 CXQ80_18360   Pseudomonas sp. 02C 26 AUF97647.1    
 CXQ81_08875   Pseudomonas sp. 09C 129 AUG00715.1    
 DJ564_07345   Pseudomonas sp. 31-12 AWM90651.1    
 H681_07305   Pseudomonas sp. ATCC 13867 AGI23337.1    
 SAMN05216509_4559   Pseudomonas sp. B10 SIR75757.1    
 AA042_04695   Pseudomonas sp. BS-2016 AU1044 AOZ12029.1    
 SAMN04490210_4304   Pseudomonas sp. bs2935 SDS96433.1    
 CCOS191_1229   Pseudomonas sp. CCOS 191 CRI55765.1    
 PDR5_12740   Pseudomonas sp. DR 5-09 ANI53004.1    
 BL240_21975   Pseudomonas sp. DRA525 APO83958.1    
 CRN80_30280   Pseudomonas sp. FDAARGOS_380 ATN13651.1    
 C163_20700   Pseudomonas sp. FGI182 AHD16055.1    
 PGR6_45290   Pseudomonas sp. GR 6-02 ANI62102.1    
 CS390_18895   Pseudomonas sp. HLS-6 ATR84443.1    
 AA098_21810   Pseudomonas sp. JY-Q ANI35990.1    
 LAB08_4044   Pseudomonas sp. LAB-08 BAV29314.1    
 B195_005055   Pseudomonas sp. Lz4W AUB74221.1    
 B9K09_16200   Pseudomonas sp. M30-35 ARU89416.1    
 TO66_06525   Pseudomonas sp. MRSN12121 AJO76967.1    
 AWU82_22495   Pseudomonas sp. MS586 AMQ85974.1    
 CLM72_07285   Pseudomonas sp. MYb193 AVJ21554.1    
 C0058_06565   Pseudomonas sp. NC02 AUO21669.1    
 CI807_13530   Pseudomonas sp. NS1(2017) ASV37162.1    
Top


Last update: 2018-09-25 © Copyright 1998-2018
AFMB - CNRS - Université d'Aix-Marseille