Glycoside Hydrolase Family 50

Activities in Familyβ-agarase (EC 3.2.1.81).
Mechanism probably retaining
ClanGH-A
Catalytic Nucleophile/BaseGlu (inferred)
Catalytic Proton DonorGlu (inferred)
External resourcesCAZypedia;
Statistics GenBank accession (572); Uniprot accession (56); PDB accession (5); 3D entries (2); cryst (0)
All (553) Archaea (6) Bacteria (547) Structure (2) Characterized (23)
| 1 | 2 | 3 | 4 | 5 | 6 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 H045_03425   Pseudomonas poae RE*1-1-14 AGE24761.1    
 SAMN05216296_2300   Pseudomonas pohangensis DSM 17875 SDU19040.1    
 SAMN05216222_1276   Pseudomonas prosekii LMG 26867 SDS35715.1    
 PPC_1334   Pseudomonas protegens Cab57 BAO60681.1    
 PFLCHA0_c13150 (AgaB)   Pseudomonas protegens CHA0 AGL83105.1    
 CEP86_01515   Pseudomonas protegens FDAARGOS_307 ASE19223.1    
 H78_01339   Pseudomonas protegens H78 AQT08042.1    
 PFL_1280   Pseudomonas protegens Pf-5 AAY90565.1 Q4KH74  
 SAMN04490201_1674   Pseudomonas psychrophila BS3667 SDU44502.1    
 AWT69_001186   Pseudomonas putida 1A00316 AMK29823.1    
 KKK_26760   Pseudomonas putida B6-2 ANC84411.1    
 PPUBIRD1_1172   Pseudomonas putida BIRD-1 ADR58854.1 E4R769  
 DW66_4526   Pseudomonas putida DLL-E4 AHZ79025.1    
 T1E_1863 (AgaB)   Pseudomonas putida DOT-T1E AFO47711.1    
 CR511_21415   Pseudomonas putida E41 ATP46462.1    
 CR512_21065   Pseudomonas putida E46 ATP51692.1    
 Pput_1162   Pseudomonas putida F1 ABQ77323.1 A5VZL3  
 PputGB1_4289   Pseudomonas putida GB-1 ABZ00178.1 B0KUB2  
 L483_25805   Pseudomonas putida H8234 AGN80240.1    
 B479_20720   Pseudomonas putida HB3267 PC9 AGA75034.1    
 IEC33019_2340   Pseudomonas putida IEC33019 ANY87887.1    
 Q5O_05860   Pseudomonas putida JB AOX07933.1    
 KF715C_ch46650   Pseudomonas putida KF715 BAW25238.1    
 PP1126   Pseudomonas putida KT2440 AAN66751.1
NP_743287.1
Q88NS8  
 SAMN05216501_2197   Pseudomonas putida N1R SIR83791.1    
 PP4_10670   Pseudomonas putida NBRC 14164 BAN52920.1    
 YSA_07314   Pseudomonas putida ND6 AFK70726.1    
 AB688_08770   Pseudomonas putida PC2 ANC02221.1    
 BG030_20965   Pseudomonas putida PP112420 APF00307.1    
 RPPX_03515   Pseudomonas putida S12 AJA12438.1    
 N805_28100   Pseudomonas putida S13.1.2 AJQ50881.1    
 PPS_4135   Pseudomonas putida S16 AEJ14674.1    
 CWR53_05640   Pseudomonas putida SGAir0191 AUA32121.1    
 A210_05615   Pseudomonas putida SJTE-1 ANI02123.1    
 PputW619_1147   Pseudomonas putida W619 ACA71652.1 B1J1C1  
 SAMN04490202_1310   Pseudomonas reinekei BS3776 SDO58028.1    
 PCA10_15960   Pseudomonas resinovorans NBRC 106553 BAN47328.1    
 SAMN04490209_3611   Pseudomonas rhodesiae BS2777 SDV12329.1    
 PMA3_05240   Pseudomonas silesiensis A3 ANJ54602.1    
 PS417_06515   Pseudomonas simiae WCS417 AIB35233.1    
 CXQ80_18360   Pseudomonas sp. 02C 26 AUF97647.1    
 CXQ81_08875   Pseudomonas sp. 09C 129 AUG00715.1    
 DJ564_07345   Pseudomonas sp. 31-12 AWM90651.1    
 H681_07305   Pseudomonas sp. ATCC 13867 AGI23337.1    
 SAMN05216509_4559   Pseudomonas sp. B10 SIR75757.1    
 AA042_04695   Pseudomonas sp. BS-2016 AU1044 AOZ12029.1    
 SAMN04490210_4304   Pseudomonas sp. bs2935 SDS96433.1    
 CCOS191_1229   Pseudomonas sp. CCOS 191 CRI55765.1    
 PDR5_12740   Pseudomonas sp. DR 5-09 ANI53004.1    
 BL240_21975   Pseudomonas sp. DRA525 APO83958.1    
 CRN80_30280   Pseudomonas sp. FDAARGOS_380 ATN13651.1    
 C163_20700   Pseudomonas sp. FGI182 AHD16055.1    
 PGR6_45290   Pseudomonas sp. GR 6-02 ANI62102.1    
 CS390_18895   Pseudomonas sp. HLS-6 ATR84443.1    
 AA098_21810   Pseudomonas sp. JY-Q ANI35990.1    
 LAB08_4044   Pseudomonas sp. LAB-08 BAV29314.1    
 B195_005055   Pseudomonas sp. Lz4W AUB74221.1    
 B9K09_16200   Pseudomonas sp. M30-35 ARU89416.1    
 TO66_06525   Pseudomonas sp. MRSN12121 AJO76967.1    
 AWU82_22495   Pseudomonas sp. MS586 AMQ85974.1    
 CLM72_07285   Pseudomonas sp. MYb193 AVJ21554.1    
 C0058_06565   Pseudomonas sp. NC02 AUO21669.1    
 CI807_13530   Pseudomonas sp. NS1(2017) ASV37162.1    
 POS17_1300   Pseudomonas sp. Os17 BAQ72994.1    
 C3F42_24100   Pseudomonas sp. PONIH3 AUY36115.1    
 CXQ82_06880   Pseudomonas sp. S09G 359 AUG06324.1    
 PST29_1333   Pseudomonas sp. St29 BAQ79222.1    
 C4Q27_05485   Pseudomonas sp. SWI36 AVD91900.1    
 C4Q26_06080   Pseudomonas sp. SWI44 AVD86732.1    
 C4Q28_21215   Pseudomonas sp. SWI6 AVD84503.1    
 THL1_1641   Pseudomonas sp. TCU-HL1 AOE84189.1    
 U771_07790   Pseudomonas sp. TKP AHC34102.1    
 PSHI_15460   Pseudomonas sp. URMO17WK12:I11 CRL48486.1    
 PYEL_07940   Pseudomonas sp. URMO17WK12:I11 CRN05042.1    
 PputUW4_01170   Pseudomonas sp. UW4 AFY18377.1    
 PVLB_05610   Pseudomonas sp. VLB120 AGZ33929.1    
 PD374_07610   Pseudomonas sp. WCS374 AIB40931.1    
 PRJ_1190   Pseudomonas sp. XWY-1 AUZ57811.1    
 SAMN05216496_4635   Pseudomonas sp. Z003-0.4C(8344-21) SDT44650.1    
 SAMN05216475_3900   Pseudomonas synxantha LMG 2190 SDU49862.1    
 B5P22_01820   Pseudomonas tolaasii 2192T ARB26076.1    
 SAMN04490205_2678   Pseudomonas trivialis BS3111 SDS49706.1    
 AA957_07485   Pseudomonas trivialis IHBB745 AKS05948.1    
 SAMN04490206_0552   Pseudomonas umsongensis BS3657 SDS32109.1    
 SAMN05216558_3897   Pseudomonas vancouverensis BS3656 SDV13394.1    
 PVE_R1G1402   Pseudomonas veronii 1YdBTEX2 SBW79289.1    
 PverR02_06825   Pseudomonas veronii R02 AQY64783.1    
 AOC04_01935   Pseudomonas versuta L10.10 ALE90952.1    
 SAMN05216237_1995   Pseudomonas yamanorum LMG 27247 SDU07764.1    
 R2APBS1_3443   Rhodanobacter denitrificans 2APBS1 AGG90506.1    
 ALSL_2081   Rhodanobacteraceae bacterium Dysh456 BBD80712.1    
 RPE_4620   Rhodopseudomonas palustris BisA53 ABJ08540.1 Q07HP4  
 RPC_4624   Rhodopseudomonas palustris BisB18 ABD90146.1 Q20XJ0  
 RPD_2419 (possible fragment)   Rhodopseudomonas palustris BisB5 ABE39649.1 Q137U0  
 RPA2424   Rhodopseudomonas palustris CGA009 CAE27865.1
NP_947766.1
Q6N739  
 Rpdx1_3083 (fragment)   Rhodopseudomonas palustris DX-1 ADU44664.1 D2MAK6  
 RPB_3029 (possible fragment)   Rhodopseudomonas palustris HaA2 ABD07731.1 Q2IVM9  
 RPPS3_24310 (fragment)   Rhodopseudomonas palustris PS3 AVT76494.1    
 Rpal_2702   Rhodopseudomonas palustris TIE-1 ACF01211.1 B3QH22  
 RPYSC3_24620 (fragment)   Rhodopseudomonas palustris YSC3 AVT81323.1    
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