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Glycoside Hydrolase Family 50

Activities in Familyβ-galactosidase (EC 3.2.1.23);
β-agarase (EC 3.2.1.81);
Mechanism Retaining (inferred) e
ClanGH-A
3D Structure Status( β / α ) 8 barrel
Catalytic Nucleophile/BaseGlu (inferred)
Catalytic Proton DonorGlu (inferred)
External resourcesCAZypedia;
Statistics GenBank accession (1797); Uniprot accession (20); PDB accession (7); 3D entries (4); cryst (0)
Summary
Download GH50 (1773) Taxonomic display Structure (4) Characterized (38)
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Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 BVIR_23 (fragment)   Blastochloris viridis ATCC 19567 ALK07841.1    
 BV133_1320 (fragment)   Blastochloris viridis DSM 133 BAR98913.1    
 KUL72_23690 (fragment)   Bradyrhizobium arachidis Hy4 UVO34485.1    
 DCM83_04215   Bradyrhizobium betae WBOS16 UUO64499.1    
 FNV92_30035 (fragment)   Bradyrhizobium cosmicum 58S1 QDP26148.1    
 LPJ38_29375 (fragment)   Bradyrhizobium daqingense CCBAU 15774 UFS87711.1    
 LPJ38_29370 (fragment)   Bradyrhizobium daqingense CCBAU 15774 UFS87710.1    
 Bdiaspc4_24390   Bradyrhizobium diazoefficiens 110spc4 QBP23434.1    
 HUW42_22315 (fragment)   Bradyrhizobium diazoefficiens 113-2 QLD43551.1    
 F07S3_51980 (fragment)   Bradyrhizobium diazoefficiens F07S3 BBZ95365.1    
 H12S4_53760 (fragment)   Bradyrhizobium diazoefficiens H12S4 BCA04472.1    
 BDHF08_48960 (fragment)   Bradyrhizobium diazoefficiens HF08 BCA13049.1    
 BDHH15_50440 (fragment)   Bradyrhizobium diazoefficiens HH15 BCA21829.1    
 QIH76_18335 (fragment)   Bradyrhizobium diazoefficiens K01E-Bd WLC20187.1    
 QIH78_24980 (fragment)   Bradyrhizobium diazoefficiens N03B-Bd WLB34746.1    
 NK6_8969 (fragment)   Bradyrhizobium diazoefficiens NK6 BAR62113.1    
 QIH81_20610 (fragment)   Bradyrhizobium diazoefficiens S14C-Bd WLA60970.1    
 AAV28_20550 (fragment)   Bradyrhizobium diazoefficiens USDA 110 AND89921.1    
 bll4656   Bradyrhizobium diazoefficiens USDA 110 NP_771296.1
BAC49921.1		    
 XF11B_49280 (fragment)   Bradyrhizobium diazoefficiens XF11 BCF00908.1    
 XF12B_56510 (fragment)   Bradyrhizobium diazoefficiens XF12 BCF10278.1    
 XF13B_49000 (fragment)   Bradyrhizobium diazoefficiens XF13 BCF18209.1    
 XF15B_49060 (fragment)   Bradyrhizobium diazoefficiens XF15 BCF35835.1    
 XF16B_49590 (fragment)   Bradyrhizobium diazoefficiens XF16 BCF44469.1    
 XF17B_50280 (fragment)   Bradyrhizobium diazoefficiens XF17 BCF53390.1    
 XF18B_48990 (fragment)   Bradyrhizobium diazoefficiens XF18 BCF61951.1    
 XF19B_49670 (fragment)   Bradyrhizobium diazoefficiens XF19 BCF70614.1    
 XF2B_49080 (fragment)   Bradyrhizobium diazoefficiens XF2 BCE31139.1    
 XF3B_50240 (fragment)   Bradyrhizobium diazoefficiens XF3 BCE39993.1    
 XF5B_49680 (fragment)   Bradyrhizobium diazoefficiens XF5 BCE57456.1    
 XF6B_49300 (fragment)   Bradyrhizobium diazoefficiens XF6 BCE66131.1    
 DI395_25895 (fragment)   Bradyrhizobium diazoefficiens XF7 QJS41016.1    
 XF8B_47070 (fragment)   Bradyrhizobium diazoefficiens XF8 BCE74596.1    
 XF9B_56080 (fragment)   Bradyrhizobium diazoefficiens XF9 BCE84187.1    
 X265_27600   Bradyrhizobium guangdongense CCBAU 51649 QAU41027.1    
 XH86_27630   Bradyrhizobium guangdongense CCBAU 51658 QOZ62087.1    
 KMZ29_19890 (fragment)   Bradyrhizobium sediminis S2-20-1 QWG11972.1    
 FJN17_19670   Bradyrhizobium sp. 3 65S1MB QDF39597.1    
 ACH79_26450 (fragment)   Bradyrhizobium sp. CCBAU 051011 QHO75643.1    
 XH90_23090   Bradyrhizobium sp. CCBAU 53338 QOZ56304.1    
 EI171_30865   Bradyrhizobium sp. LCT2 QHP71294.1    
 KMZ68_08510 (fragment)   Bradyrhizobium sp. S2-11-2 QWG19848.1    
 KMZ93_19435 (fragment)   Bradyrhizobium sp. S2-11-4 QWG22141.1    
 S23_36460 (fragment)   Bradyrhizobium sp. S23321 BAL76845.1    
 DCK84_03890   Bradyrhizobium sp. WBOS01 UUO33798.1    
 DCM75_05325   Bradyrhizobium sp. WBOS02 UUO40229.1    
 DCM79_04605   Bradyrhizobium sp. WBOS07 UUO52333.1    
 DB459_07600 (fragment)   Bradyrhizobium sp. WD16 UTD26805.1    
 HAV00_16970 (fragment)   Bradyrhizobium symbiodeficiens 101S1MB QIP07850.1    
 HAV00_16970 (fragment)   Bradyrhizobium symbiodeficiens 101S1MB QIP07850.2    
 HAU86_20655 (fragment)   Bradyrhizobium symbiodeficiens 141S2 QIP02038.1    
 CIT39_22960   Bradyrhizobium symbiodeficiens 3 85S1MB AWM09013.1    
 CIT39_22960 (fragment)   Bradyrhizobium symbiodeficiens 85S1MB AWM09013.2    
 F183_03670   Bryobacterales bacterium F-183 BCS36495.1    
 F183_A03690   Bryobacterales bacterium F-183 BDC48053.1    
 Q2T83_16295   Candidatus Fervidibacter sacchari PD1 WKU15879.1    
 Q2T83_11540   Candidatus Fervidibacter sacchari PD1 WKU14967.1    
 Acid_0712   Candidatus Solibacter usitatus Ellin6076 ABJ81713.1    
 β-agarase   Catenovulum agarivorans YM01 AVL95506.1    
 agarase Q13   Catenovulum maritimum AYW35329.1    
 agarase Q14   Catenovulum maritimum AYW35330.1    
 agarase Q4   Catenovulum maritimum AYW35321.1    
 agarase Q11   Catenovulum maritimum AYW35327.1    
 agarase Q6   Catenovulum maritimum AYW35323.1    
 agarase Q7   Catenovulum maritimum AYW35324.1    
 agarase Q5   Catenovulum maritimum AYW35322.1    
 OLW01_18035   Catenovulum sp. TS8 WAJ72179.1    
 OLW01_18395   Catenovulum sp. TS8 WAJ72244.1    
 OLW01_16310   Catenovulum sp. TS8 WAJ72303.1    
 OLW01_18415   Catenovulum sp. TS8 WAJ72248.1    
 OLW01_18090   Catenovulum sp. TS8 WAJ72190.1    
 OLW01_01770   Catenovulum sp. TS8 WAJ70573.1    
 OLW01_07935   Catenovulum sp. TS8 WAJ69120.1    
 β-agarase (D0C16_02320;β-CvAga50A;GH50A) 3.2.1.81 Cellvibrio sp. KY-GH-1 QEY14907.1    
 D0C16_02460   Cellvibrio sp. KY-GH-1 QEY14934.1    
 D0C16_02350   Cellvibrio sp. KY-GH-1 QEY14913.1    
 D0B88_11715   Cellvibrio sp. KY-YJ-3 QEY12863.1    
 D0B88_11575   Cellvibrio sp. KY-YJ-3 QEY12836.1    
 D0B88_11605   Cellvibrio sp. KY-YJ-3 QEY12842.1    
 NNX04_05070   Cellvibrio sp. QJXJ UUA73816.1    
 NNX04_05045   Cellvibrio sp. QJXJ UUA73811.1    
 NNX04_04935   Cellvibrio sp. QJXJ UUA73790.1    
 PQ459_13695   Chryseobacterium sp. KACC 21268 WDF45952.1    
 CCALI_02040   Chthonomonas calidirosea T49 CCW35847.1    
 CCALI_00922   Chthonomonas calidirosea T49 CCW34745.1    
 CCALI_01838   Chthonomonas calidirosea T49 CCW35650.1    
 KCTCHS21_13500   Cohnella abietis HS21 BBI31951.1    
 FPL14_24475   Cohnella cholangitidis 1605-214 QMV43975.1    
 HH215_34735 (fragment)   Cohnella herbarum MFER-1 QJD87847.1    
 HH215_34730 (fragment)   Cohnella herbarum MFER-1 QJD87846.1    
 HH215_30095   Cohnella herbarum MFER-1 QJD87008.1    
 neoagarobiose-/neoagarotetraose-producing β-agarase (J4772_24855; AgaW) 3.2.1.81 Cohnella sp. LGH AKV62624.1
QTH40776.1		    
 β-agarase (J4772_25280; CL5055) 3.2.1.81 Cohnella sp. LGH QTH40851.1    
 (neoagarobiose-producing) β-agarase (TYK67223.1; Ce2862) 3.2.1.81 Colwellia echini A3 WP_148747661.1    
 RI844_12315   Colwelliaceae bacterium S1-1 WOH36153.1    
 RI845_03245   Colwelliaceae bacterium SQ345 WNC69181.1    
 RI845_03140   Colwelliaceae bacterium SQ345 WNC69160.1    
 RI845_02980   Colwelliaceae bacterium SQ345 WNC69128.1    
 Caka_0369   Coraliomargarita akajimensis DSM 45221 ADE53394.1    
 SH580_16930   Coraliomargarita sp. J2-16 WPJ95111.1    
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