Glycoside Hydrolase Family 50

Activities in Familyβ-agarase (EC 3.2.1.81).
Mechanism probably retaining
ClanGH-A
3D Structure Status( β / α ) 8 barrel
Catalytic Nucleophile/BaseGlu (inferred)
Catalytic Proton DonorGlu (inferred)
External resourcesCAZypedia;
Statistics GenBank accession (1321); Uniprot accession (19); PDB accession (7); 3D entries (4); cryst (0)
Bacteria
Protein Name EC#ReferenceOrganismGenBank UniprotPDB/3D
 β-agarase (AgaA34) (peptide fragment) 3.2.1.81 pubmed
Agarivorans albus YKW-34 P85974.1    
 β-agarase (Wh50B; AgWH50B) 3.2.1.81 pubmed
Agarivorans gilvus WH0801 AQT38174.1    
 neoagarotetraose-producing β-agarase (exo-type) (AgWH50A) 3.2.1.81 pubmed
Agarivorans gilvus WH0801 AFP32918.1 I7EUZ4  
 β-agarase (AgWH50C) (neoagarobiose-producing) 3.2.1.81 pubmed
Agarivorans gilvus WH0801 AHM94172.1 A0A023LLI1 5Z6P[A,B]
 β-agarase (AgrA) (neoagarotetraose- and neoagarobiose-producing) 3.2.1.81 doi
Agarivorans sp. AG17 ACU52709.1 D3GCV0  
 agarase (Hz1;HZ-a;HZ-b;HZ-c) 3.2.1.81 pubmed
Agarivorans sp. HZ105 ADY17918.1 F1CZF7  
 β-agarase (Hz2) (neoagarotetraose-producing) 3.2.1.81 pubmed
Agarivorans sp. HZ105 ADY17919.1 F1CZF8  
 β-agarase (neoagarobiose-producing) 3.2.1.81 pubmed
Agarivorans sp. JA-1 ABK97391.1 A1E2A6  
 β-agarase (AgaA11) (neoagarobiose-producing) 3.2.1.81 pubmed
Agarivorans sp. JAMB-A11 BAD99519.1 Q4W8F0  
 β-agarase (AgaD02) 3.2.1.81 doi
Agarivorans sp. QM38 ABM90422.1 A2TGZ5  
 β-agarase (neoagarobiose-producing) 3.2.1.81 pubmed
Alteromonas sp. E-1 BAE97587.1 Q14UU1  
 β-agarase (AgaB-4) 3.2.1.81 pubmed
Paenibacillus agarexedens BCRC 16000 AVV48109.1 A0A2R4K2K7  
 exo-β-agarase (Ph1636) 3.2.1.81 pubmed
Paraglaciecola hydrolytica S66 QEP52093.1    
 exo-β-agarase (Ph1624) 3.2.1.81 pubmed
Paraglaciecola hydrolytica S66 QEP52091.1    
 exo-β-agarase (Ph1609) 3.2.1.81 pubmed
Paraglaciecola hydrolytica S66 QEP52089.1    
 β-agarase (Aga21) (neoagarobiose-producing) 3.2.1.81 pubmed
Pseudoalteromonas sp. NJ21 AHC72907.1 V9TQA6  
 exo-β-agarase A (AgaA;Sde_1176) (neoagarobiose-producing) (Aga50A) 3.2.1.81 pubmed
Saccharophagus degradans 2-40 ABD80438.1 Q21LJ1  
 exo-β-agarase D (AgaD;Sde_2644) (neoagarobiose-producing) (Aga50D) 3.2.1.81 pubmed
Saccharophagus degradans 2-40 ABD81904.1 Q21HC5 4BQ2[A,B,C,D]
4BQ3[A,B,C,D]
4BQ4[A,B]
4BQ5[A,B]
 β-agarase (DagB;Sco3487) (neoagarobiose-producing) 3.2.1.81 pubmed
Streptomyces coelicolor A3(2) CAB61811.1
NP_627690.1
Q9RKF0  
 β-agarase (neoagarobiose-producing) (AgaB1) 3.2.1.81 pubmed
Thalassotalea agarivorans BCRC17492 / TMA1 / JCM 13379 AGT98631.1 U3GSN9  
 β-agarase (Aga41A) (neoagarotetraose-producing) 3.2.1.81 pubmed
Vibrio sp. CN41 ADM25828.1 G3CHF0  
 β-agarase A (AgaA;0107) 3.2.1.81 pubmed
Vibrio sp. JT0107 BAA03541.1 P48839  
 exo-β-agarase B (AgaB) (neoagarobiose-producing) 3.2.1.81 pubmed
Vibrio sp. JT0107 BAA04744.1 P48840  
 β-agarase B (agarase-B;AgaB) 3.2.1.81 pubmed
Vibrio sp. PO-303 BAG71427.1 B5MEI9  
 β-galactosidase (VadG925;Vvad_PD3900) 3.2.1.23 pubmed
Victivallis vadensis ATCC BAA-548 EFB02686.1
ZP_01923925.1
   
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