Carbohydrate-Binding Module Family 50

Activities in FamilyModules of approx. 50 residues found attached to various enzymes from families GH18, GH19, GH23, GH24, GH25 and GH73, i.e. enzymes cleaving either chitin or peptidoglycan. Binding to chitopentaose demonstrated in the case of Pteris ryukyuensis chitinase A [Ohnuma T et al. (2008) J. Biol. Chem. 283:5178-87 (PMID: 18083709)]. CBM50 modules are also found in a multitude of other enzymes targeting the petidoglycan such as peptidases and amidases. These enzymes are not reported in the list below.
NoteAlso known as LysM domains
External resourcesCAZypedia;
Statistics GenBank accession (74272); Uniprot accession (1523); PDB accession (35); 3D entries (22); cryst (0)
All (107369) Archaea (30) Bacteria (105158) Eukaryota (1045) Viruses (1101) unclassified (35) Structure (22) Characterized (50)
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Viruses
Protein Name EC#OrganismGenBank UniprotPDB/3D
 muramidase   Aeribacillus phage AP45 APC46505.1    
 AVP_60   Aerococcus phage vB_AviM_AVP AXY81176.1    
 AVP_96 (fragment)   Aerococcus phage vB_AviM_AVP AXY81212.1    
 AVP_96 (fragment)   Aerococcus phage vB_AviM_AVP AXY81212.1    
 SEA_ABBA_19   Arthrobacter phage Abba QIN94348.1    
 PBI_ATRAXA_15   Arthrobacter phage Atraxa AYN56968.1    
 BARRETLEMON_20   Arthrobacter phage BarretLemon AMM44482.1    
 SEA_BEANS_18   Arthrobacter phage Beans ASR84698.1    
 SEA_BOSSLADY_20   Arthrobacter phage BossLady QED11758.1    
 SEA_BRENT_18   Arthrobacter phage Brent ALF01229.1    
 SEA_BUMBLE_19   Arthrobacter phage Bumble QKY79785.1    
 SEA_CHIPPER1996_23 (230)   Arthrobacter phage Chipper1996 QBP30394.1    
 SEA_CHIPPER1996_31 (310)   Arthrobacter phage Chipper1996 QBP30402.1    
 SEA_CHIPPER1996_31 (310)   Arthrobacter phage Chipper1996 QBP30402.1    
 SEA_CHIPPER1996_31 (310)   Arthrobacter phage Chipper1996 QBP30402.1    
 SEA_CHOCOLAT_23   Arthrobacter phage Chocolat AOZ64688.1    
 SEA_CHOCOLAT_31   Arthrobacter phage Chocolat AOZ64696.1    
 SEA_CHOCOLAT_31   Arthrobacter phage Chocolat AOZ64696.1    
 SEA_CHOCOLAT_31   Arthrobacter phage Chocolat AOZ64696.1    
 SEA_CHUBSTER_31   Arthrobacter phage Chubster AOZ64584.1    
 SEA_CHUBSTER_31   Arthrobacter phage Chubster AOZ64584.1    
 SEA_CHUBSTER_31   Arthrobacter phage Chubster AOZ64584.1    
 SEA_CHUBSTER_23   Arthrobacter phage Chubster AOZ64576.1    
 SEA_COLUCCI_22   Arthrobacter phage Colucci ASX98693.1    
 SEA_COLUCCI_30   Arthrobacter phage Colucci ASX98701.1    
 SEA_COLUCCI_30   Arthrobacter phage Colucci ASX98701.1    
 SEA_COLUCCI_30   Arthrobacter phage Colucci ASX98701.1    
 SEA_CONBOY_23   Arthrobacter phage Conboy ANU79626.1    
 SEA_CONBOY_31   Arthrobacter phage Conboy ANU79634.1    
 SEA_CONBOY_31   Arthrobacter phage Conboy ANU79634.1    
 SEA_CONBOY_31   Arthrobacter phage Conboy ANU79634.1    
 SEA_DANIELLEIGNACE_10   Arthrobacter phage DanielleIgnace QOP66151.1    
 SEA_DANIELLEIGNACE_10   Arthrobacter phage DanielleIgnace QOP66151.1    
 SEA_DANIELLEIGNACE_10   Arthrobacter phage DanielleIgnace QOP66151.1    
 SEA_DRYANG_31   Arthrobacter phage DrYang QGZ17130.1    
 SEA_DRYANG_31   Arthrobacter phage DrYang QGZ17130.1    
 SEA_DRYANG_31   Arthrobacter phage DrYang QGZ17130.1    
 SEA_DRYANG_23   Arthrobacter phage DrYang QGZ17122.1    
 SEA_EDGARPOE_23   Arthrobacter phage EdgarPoe APC44707.1    
 SEA_EDGARPOE_31   Arthrobacter phage EdgarPoe APC44715.1    
 SEA_EDGARPOE_31   Arthrobacter phage EdgarPoe APC44715.1    
 SEA_EDGARPOE_31   Arthrobacter phage EdgarPoe APC44715.1    
 SEA_FRANZY_18   Arthrobacter phage Franzy ASR78122.1    
 SEA_GREKAYCON_20   Arthrobacter phage Grekaycon QDH48510.1    
 SEA_HUMPTYDUMPTY_23   Arthrobacter phage HumptyDumpty APC44818.1    
 SEA_HUMPTYDUMPTY_31   Arthrobacter phage HumptyDumpty APC44826.1    
 SEA_HUMPTYDUMPTY_31   Arthrobacter phage HumptyDumpty APC44826.1    
 SEA_HUMPTYDUMPTY_31   Arthrobacter phage HumptyDumpty APC44826.1    
 JAWNSKI_18   Arthrobacter phage Jawnski ALY09348.1    
 SEA_JAYCOOKIE_31   Arthrobacter phage JayCookie ASZ73242.1    
 SEA_JAYCOOKIE_31   Arthrobacter phage JayCookie ASZ73242.1    
 SEA_JAYCOOKIE_31   Arthrobacter phage JayCookie ASZ73242.1    
 SEA_JAYCOOKIE_23   Arthrobacter phage JayCookie ASZ73234.1    
 Jinkies_22   Arthrobacter phage Jinkies QKY78970.1    
 SEA_JKERNS_20   Arthrobacter phage JKerns QIQ62832.1    
 SEA_JORDAN_20   Arthrobacter phage Jordan ASR80573.1    
 SEA_KABREEZE_23   Arthrobacter phage Kabreeze ASX98808.1    
 SEA_KABREEZE_31   Arthrobacter phage Kabreeze ASX98816.1    
 SEA_KABREEZE_31   Arthrobacter phage Kabreeze ASX98816.1    
 SEA_KABREEZE_31   Arthrobacter phage Kabreeze ASX98816.1    
 KBurrousTX_23   Arthrobacter phage KBurrousTX AYD81517.1    
 KBurrousTX_31   Arthrobacter phage KBurrousTX AYD81525.1    
 KBurrousTX_31   Arthrobacter phage KBurrousTX AYD81525.1    
 KBurrousTX_31   Arthrobacter phage KBurrousTX AYD81525.1    
 SEA_KING2_18   Arthrobacter phage King2 QNJ59588.1    
 SEA_LEEROYJ_20   Arthrobacter phage LeeroyJ AYD86491.1    
 SEA_LINUS_31   Arthrobacter phage Linus QEQ94532.1    
 SEA_LINUS_31   Arthrobacter phage Linus QEQ94532.1    
 SEA_LINUS_31   Arthrobacter phage Linus QEQ94532.1    
 SEA_LINUS_23   Arthrobacter phage Linus QEQ94524.1    
 SEA_LYMARA_23   Arthrobacter phage Lymara QFG14825.1    
 SEA_LYMARA_31   Arthrobacter phage Lymara QFG14833.1    
 SEA_LYMARA_31   Arthrobacter phage Lymara QFG14833.1    
 SEA_LYMARA_31   Arthrobacter phage Lymara QFG14833.1    
 MARTHA_20   Arthrobacter phage Martha ALY09673.1    
 SEA_MORDRED_31   Arthrobacter phage Mordred QEQ94137.1    
 SEA_MORDRED_31   Arthrobacter phage Mordred QEQ94137.1    
 SEA_MORDRED_31   Arthrobacter phage Mordred QEQ94137.1    
 SEA_MORDRED_23   Arthrobacter phage Mordred QEQ94129.1    
 PBI_NOELY_14   Arthrobacter phage Noely AYN55955.1    
 SEA_PHIVES_1   Arthrobacter phage Phives QOP65129.1    
 SEA_PHIVES_1   Arthrobacter phage Phives QOP65129.1    
 SEA_PICCOLETTO_18   Arthrobacter phage Piccoletto ASR80649.1    
 SEA_PIPPA_20   Arthrobacter phage Pippa QOP66261.1    
 PRINCESSTRINA_31   Arthrobacter phage PrincessTrina ALY09877.1    
 PRINCESSTRINA_31   Arthrobacter phage PrincessTrina ALY09877.1    
 PRINCESSTRINA_31   Arthrobacter phage PrincessTrina ALY09877.1    
 PRINCESSTRINA_23   Arthrobacter phage PrincessTrina ALY09869.1    
 SEA_ROSIEPOSIE_23   Arthrobacter phage RosiePosie ASX98919.1    
 SEA_ROSIEPOSIE_31   Arthrobacter phage RosiePosie ASX98927.1    
 SEA_ROSIEPOSIE_31   Arthrobacter phage RosiePosie ASX98927.1    
 SEA_ROSIEPOSIE_31   Arthrobacter phage RosiePosie ASX98927.1    
 SEA_SCAVITO_31   Arthrobacter phage Scavito ASX99039.1    
 SEA_SCAVITO_31   Arthrobacter phage Scavito ASX99039.1    
 SEA_SCAVITO_31   Arthrobacter phage Scavito ASX99039.1    
 SEA_SCAVITO_23   Arthrobacter phage Scavito ASX99031.1    
 SEA_SHADE_20   Arthrobacter phage Shade ASR80725.1    
 SEA_SONALI_23   Arthrobacter phage Sonali QAY16135.1    
 SEA_SONALI_23   Arthrobacter phage Sonali QAY16135.1    
 SONNY_20   Arthrobacter phage Sonny ALY10288.1    
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