Carbohydrate-Binding Module Family 50

Activities in FamilyModules of approx. 50 residues found attached to various enzymes from families GH18, GH19, GH23, GH24, GH25 and GH73, i.e. enzymes cleaving either chitin or peptidoglycan. Binding to chitopentaose demonstrated in the case of Pteris ryukyuensis chitinase A [Ohnuma T et al. (2008) J. Biol. Chem. 283:5178-87 (PMID: 18083709)]. CBM50 modules are also found in a multitude of other enzymes targeting the petidoglycan such as peptidases and amidases. These enzymes are not reported in the list below.
NoteAlso known as LysM domains
External resourcesCAZypedia;
Statistics GenBank accession (34041); Uniprot accession (1529); PDB accession (27); 3D entries (18); cryst (0)
All (48785) Archaea (13) Bacteria (47895) Eukaryota (466) Viruses (403) unclassified (8) Structure (18) Characterized (52)
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Viruses
Protein Name EC#OrganismGenBank UniprotPDB/3D
 Goe2_c09200   Bacillus phage vB_BsuM-Goe2 APZ82328.1    
 Goe1_c00250   Bacillus phage vB_BsuP-Goe1 AMR58251.1    
 Goe1_c00250   Bacillus phage vB_BsuP-Goe1 AMR58251.1    
 Goe1_c00250   Bacillus phage vB_BsuP-Goe1 AMR58251.1    
 Goe1_c00250   Bacillus phage vB_BsuP-Goe1 AMR58251.1    
 Goe6_c00190   Bacillus phage vB_BveP-Goe6 ASR76804.1    
 Goe6_c00190   Bacillus phage vB_BveP-Goe6 ASR76804.1    
 ANDROMEDA_32   Bacillus virus Andromeda AGE61102.1    
 ANDROMEDA_32   Bacillus virus Andromeda AGE61102.1    
 lysozyme (B103_15) 3.2.1.17 Bacillus virus B103 CAA67646.1
NP_690649.1
Q37896  
 lysozyme (B103_15) 3.2.1.17 Bacillus virus B103 CAA67646.1
NP_690649.1
Q37896  
 Blastoid_34   Bacillus virus Blastoid AGY46833.1    
 Blastoid_34   Bacillus virus Blastoid AGY46833.1    
 CURLY_32   Bacillus virus Curly AGE60719.1    
 CURLY_32   Bacillus virus Curly AGE60719.1    
 EOGHAN_31   Bacillus virus Eoghan AGE60795.1    
 EOGHAN_31   Bacillus virus Eoghan AGE60795.1    
 FINN_30   Bacillus virus Finn AGE61023.1    
 FINN_30   Bacillus virus Finn AGE61023.1    
 G_22 (22)   Bacillus virus G AEO93293.1    
 G_185 (185)   Bacillus virus G AEO93445.1    
 G_185 (185)   Bacillus virus G AEO93445.1    
 G_185 (185)   Bacillus virus G AEO93445.1    
 G_23 (23)   Bacillus virus G AEO93294.1    
 Glittering_32   Bacillus virus Glittering AGY47219.1    
 Glittering_32   Bacillus virus Glittering AGY47219.1    
 PBI_PBS1_205   Bacillus virus PBS1 ASU00027.1    
 PBI_PBS1_85   Bacillus virus PBS1 AST99907.1    
 PBI_PBS1_85   Bacillus virus PBS1 AST99907.1    
 PBI_PBS1_85   Bacillus virus PBS1 AST99907.1    
 lysozyme 3.2.1.17 Bacillus virus phi29 AAA32288.1
AAA88347.1
ACE96038.1
CAA28632.1
B3VMQ1
P11187
 
 lysozyme 3.2.1.17 Bacillus virus phi29 AAA32288.1
AAA88347.1
ACE96038.1
CAA28632.1
B3VMQ1
P11187
 
 Riggi_33   Bacillus virus Riggi AGY48195.1    
 Riggi_33   Bacillus virus Riggi AGY48195.1    
 TAYLOR_31   Bacillus virus Taylor AGE60949.1    
 TAYLOR_31   Bacillus virus Taylor AGE60949.1    
 ABOUO_22   Brevibacillus phage Abouo AGR47462.1    
 DAVIES_22   Brevibacillus phage Davies AGR47554.1    
 JIMMER1_24   Brevibacillus phage Jimmer1 AGR47269.1    
 JIMMER2_24   Brevibacillus phage Jimmer2 AGR47166.1    
 OSIRIS_27   Brevibacillus phage Osiris ALA07366.1    
 POWDER_27   Brevibacillus phage Powder ALA48037.1    
 ORF   Citrobacter phage IME-CF2 AKR16017.1    
 CPT_Margaery23   Citrobacter phage Margaery ALF01712.1    
 CPTMiller_0020   Citrobacter phage Miller AIK67956.1    
 ABCD_0021   Citrobacter phage vB_CfrM_CfP1 ANS06110.1    
 Semix9P1_phi16   Clostridioides phage phiSemix9P1 ARB07059.1    
 CDKM15_23   Clostridium phage CDKM15 ANT45166.1    
 CDHM9_18   Clostridium phage CDKM9 ANT45086.1    
 PHICD48101_20015   Clostridium phage phiCD481-1 CEK40586.1    
 PHICD505_20018   Clostridium phage phiCD505 CEK40643.1    
 PHICD506_20015   Clostridium phage phiCD506 CEK40716.1    
 putatice cell wall hydrolase/LysM protein (Phicdhm11_gp14)   Clostridium phage phiCDHM11 CDL68831.1    
 puative cell wall hydrolase/LysM protein (Phicdhm13_gp14)   Clostridium phage phiCDHM13 CDL65297.1    
 ORF   Clostridium phage phiCDHM14 CDU85301.1    
 ORF   Clostridium phage phiCDHM19 CDW17204.1    
 phiCT453A_47   Clostridium phage phiCT453A AJA42537.1    
 phiCT9441A_60   Clostridium phage phiCT9441A AJA42672.1    
 PHIMMP01_20023   Clostridium phage phiMMP01 CEK40777.1    
 phiMMP02_gp19   Clostridium phage phiMMP02 AFO72080.1    
 PHIMMP03_20023   Clostridium phage phiMMP03 CEK40858.1    
 phiMMP04_gp14   Clostridium phage phiMMP04 AFO72151.1    
 GAP161_018   Cronobacter phage vB_CsaM_GAP161 AFC22125.1    
 GAP32_180   Cronobacter phage vB_CsaM_GAP32 GAP-32 AFC21630.1    
 B_021   Cronobacter phage vB_CsaM_leB AOG16147.1    
 E_020   Cronobacter phage vB_CsaM_leE AON97029.1    
 N_020   Cronobacter phage vB_CsaM_leN AOG16426.1    
 ADS69_00017   Enterobacter phage phiEap-3 ALA45122.1    
 ORF   Enterobacteria phage RB43 CCK73868.1    
 RaK2_00029   Enterobacteria phage vB_KleM-RaK2 AFA44302.1    
 peptidoglycan-binding LysM   Enterococcus phage ECP3 AII28464.1    
 aggregation promoting factor   Enterococcus phage EF1 ASZ76689.1    
 aggregation promoting factor   Enterococcus phage EF5 ASZ77502.1    
 EFLK1_ORF194   Enterococcus phage EFLK1 AKC05154.1    
 EFP01_092   Enterococcus phage EFP01 APZ82019.1    
 EFP01_116   Enterococcus phage EFP01 APZ82043.1    
 PHIEF11_0026   Enterococcus phage phiEf11 ACV83340.1 C9E2L1  
 PHIEF11_0026   Enterococcus phage phiEf11 ACV83340.1 C9E2L1  
 endolysin (Gp60)   Enterococcus phage phiFL1A ACZ63759.1 D2IYY2  
 endolysin (Gp60)   Enterococcus phage phiFL1A ACZ63759.1 D2IYY2  
 endolysin (Gp62)   Enterococcus phage phiFL1B ACZ63822.1 D2IZ45  
 endolysin (Gp62)   Enterococcus phage phiFL1B ACZ63822.1 D2IZ45  
 endolysin (Gp72)   Enterococcus phage phiFL1C ACZ63895.1 D2IZB8  
 endolysin (Gp72)   Enterococcus phage phiFL1C ACZ63895.1 D2IZB8  
 endolysin (Gp61)   Enterococcus phage phiFL2A ACZ63958.1 D2IZI1  
 endolysin (Gp61)   Enterococcus phage phiFL2A ACZ63958.1 D2IZI1  
 endolysin (Gp58)   Enterococcus phage phiFL2B ACZ64018.1 D2IZP1  
 endolysin (Gp58)   Enterococcus phage phiFL2B ACZ64018.1 D2IZP1  
 endolysin (Gp63)   Enterococcus phage phiFL3A ACZ64082.1 D2IZV5  
 endolysin (Gp63)   Enterococcus phage phiFL3A ACZ64082.1 D2IZV5  
 endolysin (Gp65)   Enterococcus phage phiFL3B ACZ64148.1 D2J021  
 endolysin (Gp65)   Enterococcus phage phiFL3B ACZ64148.1 D2J021  
 endolysin (Gp55)   Enterococcus phage phiFL4A ACZ64204.1 D2J077  
 endolysin (Gp55)   Enterococcus phage phiFL4A ACZ64204.1 D2J077  
 lysin   Enterococcus phage vB_EfaS_IME197 ALO80988.1    
 lysin   Enterococcus phage vB_EfaS_IME197 ALO80988.1    
 PBI_121Q_532   Escherichia phage 121Q AIT14422.1    
 ORF   Escherichia phage ECML-4 AFO10414.1    
 ORF   Escherichia phage PBECO 4 AGC34720.1    
 ORF   Escherichia phage phT4A ANN86283.1    
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