Carbohydrate-Binding Module Family 50

Activities in FamilyModules of approx. 50 residues found attached to various enzymes from families GH18, GH19, GH23, GH24, GH25 and GH73, i.e. enzymes cleaving either chitin or peptidoglycan. Binding to chitopentaose demonstrated in the case of Pteris ryukyuensis chitinase A [Ohnuma T et al. (2008) J. Biol. Chem. 283:5178-87 (PMID: 18083709)]. CBM50 modules are also found in a multitude of other enzymes targeting the petidoglycan such as peptidases and amidases. These enzymes are not reported in the list below.
NoteAlso known as LysM domains
External resourcesCAZypedia;
Statistics GenBank accession (40602); Uniprot accession (1528); PDB accession (27); 3D entries (18); cryst (0)
All (57560) Archaea (13) Bacteria (56565) Eukaryota (530) Viruses (444) unclassified (8) Structure (18) Characterized (52)
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Viruses
Protein Name EC#OrganismGenBank UniprotPDB/3D
 ORF50   Lactococcus phage P335 ABI54253.1 B5SP49  
 endolysin   Lactococcus phage phiAM2 AAG24366.1 Q9FZS8  
 endolysin   Lactococcus phage phiAM2 AAG24366.1 Q9FZS8  
 T548_0166   Lactococcus phage phiL47 AHC94243.1    
 LysB   Lactococcus phage phiLC3 IMN-C3 AAA20878.1 Q37969  
 LysB   Lactococcus phage phiLC3 IMN-C3 AAA20878.1 Q37969  
 ORF   Lactococcus phage PLg-TB25 APC44676.1    
 ORF   Lactococcus phage PLg-TB25 APC44676.1    
 LYS   Lactococcus phage TP712 AAX13240.1    
 LYS   Lactococcus phage TP712 AAX13240.1    
 lysin (Lys)   Lactococcus phage TP901-1 AAK38070.1
NP_112716.1
Q9AZ52  
 lysin (Lys)   Lactococcus phage TP901-1 AAK38070.1
NP_112716.1
Q9AZ52  
 lysin   Lactococcus phage TPW22 AAF12705.1 Q9T1Z3  
 lysin   Lactococcus phage TPW22 AAF12705.1 Q9T1Z3  
 lysin   Lactococcus phage Tuc2009 AAK19881.1
NP_108734.1
Q38614  
 lysin   Lactococcus phage Tuc2009 AAK19881.1
NP_108734.1
Q38614  
 lysin   Lactococcus phage ul36 AAM75805.1
NP_663692.1
Q8LTP4  
 lysin   Lactococcus phage ul36 AAM75805.1
NP_663692.1
Q8LTP4  
 lysin   Lactococcus phage ul36.k1 ABD63694.1 A5GYG5  
 lysin   Lactococcus phage ul36.k1 ABD63694.1 A5GYG5  
 endolysin   Lactococcus phage ul36.k1t1 ABD63745.1 A5GYL4  
 endolysin   Lactococcus phage ul36.k1t1 ABD63745.1 A5GYL4  
 WRP3_004   Lactococcus phage WRP3 AIX12507.1    
 WRP3_154   Lactococcus phage WRP3 AIX12657.1    
 WRP3_154   Lactococcus phage WRP3 AIX12657.1    
 endolysin (Ply40;gp26)   Listeria phage P40 ACI00386.1 B6D7J9  
 ORF   Listeria phage PSU-VKH-LP041 AWN07989.1    
 ORF   Listeria phage PSU-VKH-LP041 AWN07977.1    
 ORF   Lysinibacillus phage vB_LspM-01 ATN94276.1    
 PBI_CASEY_23   Microbacterium phage Casey AVJ51719.1    
 PBI_GOLDEN_24   Microbacterium phage Golden AVJ49771.1    
 PBI_KOJI_24   Microbacterium phage Koji AVJ49922.1    
 PBI_LUCKY3_240   Microbacterium phage Lucky3 AVJ50081.1    
 PBI_PAJAZA_23   Microbacterium phage Pajaza AVJ51014.1    
 PBI_PIKMIN_23   Microbacterium phage Pikmin AVJ51161.1    
 MP1_gp0122   Morganella phage vB_MmoM_MP1 ANM46557.1    
 ORF432   Oenoccocus phage fOgPSU1 CAF32661.1 Q6EVN0  
 ORF432   Oenoccocus phage fOgPSU1 CAF32661.1 Q6EVN0  
 ORF432   Oenococcus phage fOg30 CAF32671.1 Q6A204  
 ORF432   Oenococcus phage fOg30 CAF32671.1 Q6A204  
 Lys44   Oenococcus phage fOg44 AAD10705.2
AAD10705.1
CAD19148.1
Q9ZXH8  
 Lys44   Oenococcus phage fOg44 AAD10705.2
AAD10705.1
CAD19148.1
Q9ZXH8  
 ORF   Oenococcus phage phi9805 AHC30352.1    
 ORF   Oenococcus phage phi9805 AHC30352.1    
 Phage lysin   Oenococcus phage phiS11 AHB80346.1    
 Phage lysin   Oenococcus phage phiS11 AHB80346.1    
 ORF   Oenococcus phage phiS13 AHB80404.1    
 ORF   Oenococcus phage phiS13 AHB80404.1    
 CBB_187   Pectobacterium phage CBB AMM43752.1    
 phiP43_147   Proteus phage phiP4-3 AUM58505.1    
 ORF   Proteus phage PM2 ASZ76373.1    
 Pm5461_115   Proteus phage vB_PmiM_Pm5461 AKA61980.1    
 Lu11_0113   Pseudomonas phage Lu11 AFH14645.1    
 lysin   Rhodococcus phage REQ1 AEV52059.1    
 Toil_gp20   Rhodococcus phage Toil ARK07703.1    
 SP029_00647   Salmonella phage FSL SP-029 AGF89109.1    
 SP063_00722   Salmonella phage FSL SP-063 AGF88595.1    
 ORF   Salmonella phage GG32 ANN85992.1    
 CPT_Mutine_115   Salmonella phage Mutine AUG88247.1    
 ORF   Salmonella phage SP1 ASZ77651.1    
 ORF   Salmonella phage STML-13-1 AFU64206.1    
 STP07_143   Salmonella phage STP07 APD18410.1    
 ORF   Salmonella phage vB_SalM_SJ2 AHK61369.1    
 Vi01_110c   Salmonella phage ViI CBW37978.1 E1XTB9  
 BF_0185   Serratia phage BF AQW88710.1    
 PhageB1_056   Staphylococcus phage B1 Staphylococcus aureus DPC5246 AUO26762.1    
 ORF   Staphylococcus phage HYZ21 AVZ44527.1    
 PhageJA1_054   Staphylococcus phage JA1 Staphylococcus aureus CIT281189 ASR76865.1    
 phiSA039_0036   Staphylococcus phage phiSA039 BBC69495.1    
 pSa3_045   Staphylococcus phage pSa-3 AQT25486.1    
 qdsa001_39   Staphylococcus phage qdsa001 ARQ95796.1    
 qdsa002_69   Staphylococcus phage qdsa002 ARQ96026.1    
 ORF   Staphylococcus phage SA3 ASZ77975.1    
 SAP1_002   Staphylococcus phage StAP1 APC42867.1    
 Stau2_163   Staphylococcus phage Stau2 AKA61414.1    
 RS_056   Staphylococcus phage vB_SauM-fRuSau02 AST15574.1    
 C5023_000060   Staphylococcus phage vB_SauM_0414_108 AVX47414.1    
 LM12_0176   Staphylococcus phage vB_SauM_LM12 AUV57097.1    
 vBSauCG_201   Staphylococcus phage vB_Sau_CG ARM69116.1    
 vBSauClo6_188   Staphylococcus phage vB_Sau_Clo6 ARM69329.1    
 vBSauS24_186   Staphylococcus phage vB_Sau_S24 ARM69540.1    
 vB_SscM-1_060   Staphylococcus phage vB_SscM-1 ANT44723.1    
 vB_SscM-1_060   Staphylococcus phage vB_SscM-1 ANT44723.1    
 vB_SscM-2_058   Staphylococcus phage vB_SscM-2 ANT44925.1    
 vB_SscM-2_058   Staphylococcus phage vB_SscM-2 ANT44925.1    
 phiD12_0024   Streptococcus phage phiD12 AGF87618.1
AGF89736.1
   
 cell wall hydrolase   Streptococcus phage phiJH1301-2 ANM47645.1    
 phiNJ3_56   Streptococcus phage phiNJ3 ALA07057.1    
 phiSC070807_56   Streptococcus phage phiSC070807 ALA07120.1    
 SEA_AARONOCOLUS_26   Streptomyces phage Aaronocolus AKY03408.1    
 SEA_AMELA_27   Streptomyces phage Amela AKY03782.1    
 SEA_ATTOOMI_20   Streptomyces phage Attoomi AUG87152.1    
 SEA_BEARDEDLADY_27   Streptomyces phage BeardedLady ATE84905.1    
 SEA_BILLNYE_17   Streptomyces phage BillNye AVD99219.1    
 SEA_BRATAYLOR_28   Streptomyces phage Brataylor AOQ27076.1    
 transglycosylase   Streptomyces phage BRock APC46305.1    
 SEA_BRYANRECYCLES_27   Streptomyces phage BryanRecycles ATE84980.1    
 SEA_CALIBURN_26   Streptomyces phage Caliburn AKY03336.1    
 SEA_CELESTE_26   Streptomyces phage Celeste ATE85054.1    
 SEA_DANZINA_27   Streptomyces phage Danzina AKY03482.1    
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