Carbohydrate-Binding Module Family 50

Activities in FamilyModules of approx. 50 residues found attached to various enzymes from families GH18, GH19, GH23, GH24, GH25 and GH73, i.e. enzymes cleaving either chitin or peptidoglycan. Binding to chitopentaose demonstrated in the case of Pteris ryukyuensis chitinase A [Ohnuma T et al. (2008) J. Biol. Chem. 283:5178-87 (PMID: 18083709)]. CBM50 modules are also found in a multitude of other enzymes targeting the petidoglycan such as peptidases and amidases. These enzymes are not reported in the list below.
NoteAlso known as LysM domains
External resourcesCAZypedia;
Statistics GenBank accession (32450); Uniprot accession (1529); PDB accession (27); 3D entries (18); cryst (0)
All (46550) Archaea (12) Bacteria (45699) Eukaryota (444) Viruses (387) unclassified (8) Structure (18) Characterized (52)
| 1 | 2 | 3 | 4 |
Viruses
Protein Name EC#OrganismGenBank UniprotPDB/3D
 lysin   Lactococcus phage ul36 AAM75805.1
NP_663692.1
Q8LTP4  
 lysin   Lactococcus phage ul36.k1 ABD63694.1 A5GYG5  
 lysin   Lactococcus phage ul36.k1 ABD63694.1 A5GYG5  
 endolysin   Lactococcus phage ul36.k1t1 ABD63745.1 A5GYL4  
 endolysin   Lactococcus phage ul36.k1t1 ABD63745.1 A5GYL4  
 WRP3_004   Lactococcus phage WRP3 AIX12507.1    
 WRP3_154   Lactococcus phage WRP3 AIX12657.1    
 WRP3_154   Lactococcus phage WRP3 AIX12657.1    
 endolysin (Ply40;gp26)   Listeria phage P40 ACI00386.1 B6D7J9  
 MP1_gp0122   Morganella phage vB_MmoM_MP1 ANM46557.1    
 ORF432   Oenoccocus phage fOgPSU1 CAF32661.1 Q6EVN0  
 ORF432   Oenoccocus phage fOgPSU1 CAF32661.1 Q6EVN0  
 ORF432   Oenococcus phage fOg30 CAF32671.1 Q6A204  
 ORF432   Oenococcus phage fOg30 CAF32671.1 Q6A204  
 Lys44   Oenococcus phage fOg44 AAD10705.2
AAD10705.1
CAD19148.1
Q9ZXH8  
 Lys44   Oenococcus phage fOg44 AAD10705.2
AAD10705.1
CAD19148.1
Q9ZXH8  
 ORF   Oenococcus phage phi9805 AHC30352.1    
 ORF   Oenococcus phage phi9805 AHC30352.1    
 Phage lysin   Oenococcus phage phiS11 AHB80346.1    
 Phage lysin   Oenococcus phage phiS11 AHB80346.1    
 ORF   Oenococcus phage phiS13 AHB80404.1    
 ORF   Oenococcus phage phiS13 AHB80404.1    
 CBB_187   Pectobacterium phage CBB AMM43752.1    
 ORF   Proteus phage PM2 ASZ76373.1    
 Pm5461_115   Proteus phage vB_PmiM_Pm5461 AKA61980.1    
 Lu11_0113   Pseudomonas phage Lu11 AFH14645.1    
 lysin   Rhodococcus phage REQ1 AEV52059.1    
 Toil_gp20   Rhodococcus phage Toil ARK07703.1    
 SP029_00647   Salmonella phage FSL SP-029 AGF89109.1    
 SP063_00722   Salmonella phage FSL SP-063 AGF88595.1    
 ORF   Salmonella phage GG32 ANN85992.1    
 ORF   Salmonella phage SP1 ASZ77651.1    
 ORF   Salmonella phage STML-13-1 AFU64206.1    
 STP07_143   Salmonella phage STP07 APD18410.1    
 ORF   Salmonella phage vB_SalM_SJ2 AHK61369.1    
 Vi01_110c   Salmonella phage ViI CBW37978.1 E1XTB9  
 BF_0185   Serratia phage BF AQW88710.1    
 pSa3_045   Staphylococcus phage pSa-3 AQT25486.1    
 qdsa001_39   Staphylococcus phage qdsa001 ARQ95796.1    
 qdsa002_69   Staphylococcus phage qdsa002 ARQ96026.1    
 ORF   Staphylococcus phage SA3 ASZ77975.1    
 SAP1_002   Staphylococcus phage StAP1 APC42867.1    
 Stau2_163   Staphylococcus phage Stau2 AKA61414.1    
 RS_056   Staphylococcus phage vB_SauM-fRuSau02 AST15574.1    
 vBSauCG_201   Staphylococcus phage vB_Sau_CG ARM69116.1    
 vBSauClo6_188   Staphylococcus phage vB_Sau_Clo6 ARM69329.1    
 vBSauS24_186   Staphylococcus phage vB_Sau_S24 ARM69540.1    
 vB_SscM-1_060   Staphylococcus phage vB_SscM-1 ANT44723.1    
 vB_SscM-1_060   Staphylococcus phage vB_SscM-1 ANT44723.1    
 vB_SscM-2_058   Staphylococcus phage vB_SscM-2 ANT44925.1    
 vB_SscM-2_058   Staphylococcus phage vB_SscM-2 ANT44925.1    
 phiD12_0024   Streptococcus phage phiD12 AGF87618.1
AGF89736.1
   
 cell wall hydrolase   Streptococcus phage phiJH1301-2 ANM47645.1    
 phiNJ3_56   Streptococcus phage phiNJ3 ALA07057.1    
 phiSC070807_56   Streptococcus phage phiSC070807 ALA07120.1    
 SEA_AARONOCOLUS_26   Streptomyces phage Aaronocolus AKY03408.1    
 SEA_AMELA_27   Streptomyces phage Amela AKY03782.1    
 SEA_BRATAYLOR_28   Streptomyces phage Brataylor AOQ27076.1    
 transglycosylase   Streptomyces phage BRock APC46305.1    
 SEA_CALIBURN_26   Streptomyces phage Caliburn AKY03336.1    
 SEA_DANZINA_27   Streptomyces phage Danzina AKY03482.1    
 SEA_GODPOWER_27   Streptomyces phage Godpower AOQ27003.1    
 SEA_HYDRA_28   Streptomyces phage Hydra AKY03559.1    
 SEA_IZZY_27   Streptomyces phage Izzy AKY03634.1    
 PBI_JAY2JAY_49   Streptomyces phage Jay2Jay AIW02547.1    
 SEA_LANNISTER_28   Streptomyces phage Lannister AKY03710.1    
 LIKA_26   Streptomyces phage Lika AGM12049.1    
 SEA_LORELEI_26   Streptomyces phage Lorelei AOQ26925.1    
 SEA_MILDRED21_42   Streptomyces phage Mildred21 ASR75449.1    
 SEA_NANODON_28   Streptomyces phage Nanodon ANT41098.1    
 SEA_NOOTNOOT_40   Streptomyces phage NootNoot ASR77309.1    
 SEA_PARADIDDLES_40   Streptomyces phage Paradiddles ASR77530.1    
 SEA_PEEBS_43   Streptomyces phage Peebs ASR77749.1    
 SEA_SAMISTI12_44   Streptomyces phage Samisti12 AST15275.1    
 SF1_420   Streptomyces phage SF1 AKY02191.1    
 SF3_220   Streptomyces phage SF3 ALF00153.1    
 SUJIDADE_27   Streptomyces phage Sujidade AGM12125.1    
 SEA_SUSHI23_44   Streptomyces phage Sushi23 ASR76476.1    
 SEA_VERSE_27   Streptomyces phage Verse AKY03857.1    
 SEA_WARPY_48   Streptomyces phage Warpy ASN73122.1    
 ZEMYLA_27   Streptomyces phage Zemlya AGM12202.1    
 bacteriophage SPbeta N-acetylmuramoyl-L-alanine amidase (BlyA)   Thermus phage phi OH2 BAN62877.1    
 ORF   Thermus phage phi OH2 BAN62887.1    
 ORF   uncultured Mediterranean phage uvMED BAR34164.1    
 ORF   uncultured virus ASF00795.1    
 2016_scaffold57_00015   unidentified phage AFB75734.1    
 2210_scaffold709_00019   unidentified phage AFB76124.1    
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