GlycosylTransferase Family 104

Activities in FamilyDTDP-L-Rha: α-L-rhamnosyltransferase (EC 2.4.1.-);
Mechanism Inverting
NoteLassak et al. identified EarP as EF-P arginine R32 specific rhamnosyl transferase in Shewanella oneidensis using dTDP-b-L-rhamnose as donor substrate (PMID=25686373). The results of this study were subsequently confirmed for Pseudomonas aeruginosa (PMID=26060278), Pseudomonas putida (PMID=28951478) and Neisseria meningitidis (PMID=26840407). In 2016, it has been shown for S. oneidensis (PMID=28451135) and P. aeruginosa (PMID=28451332) that the enzyme is an inverting glycosyltransferase, thus mediating the formation of an a-L-rhamnosidic linkage. A structural basis for the arginine glycosylation reaction was provided by Krafczyk, Macosek and coworkers by having solved the crystal structure of the GT-B folding EarP from P. putida and an accompanying biochemical analysis of the enzyme (PMID=28951478).
Statistics GenBank accession (3950); Uniprot accession (4); PDB accession (12); 3D entries (4); cryst (0)
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Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 NITFAB_0894   Candidatus Nitrotoga fabula SPS05304.1    
 W01_11490   Candidatus Nitrotoga sp. AM1P BBJ23222.1    
 C3B55_00681   Candidatus Pseudomonas adelgestsugas QAX82005.1    
 GJV44_00265 (EarP)   Candidatus Vallotia cooleyia isolate 19-005_Vallotia UDG82030.1    
 GKR41_00563 (EarP)   Candidatus Vallotia lariciata isolate Ad13-081_Vallotia UDG83174.1    
 MYVALT_G_02900 (EarP)   Candidatus Vallotia tarda isolate MYVALT CAG7598714.1    
 FY115_10445 (EarP)   Cellvibrio japonicus ADPT1-KOJIBIOSE QEI19755.1    
 FY116_10450 (EarP)   Cellvibrio japonicus ADPT2-NIGEROSE QEI16177.1    
 FY117_10445 (EarP)   Cellvibrio japonicus ADPT3-ISOMALTOSE QEI12603.1    
 CJA_2148   Cellvibrio japonicus Ueda107 ACE85380.1    
 D0C16_06530 (EarP)   Cellvibrio sp. KY-GH-1 QEY15654.1    
 D0B88_14895 (EarP)   Cellvibrio sp. KY-YJ-3 QEY13418.1    
 CBR65_01855   Cellvibrio sp. PSBB006 ARU26277.1    
 B0D95_06595   Cellvibrio sp. PSBB023 AQT59789.1    
 NNX04_02000 (EarP)   Cellvibrio sp. QJXJ UUA73234.1    
 VSU16_05770 (EarP)   Cetobacterium somerae WVJ00333.1    
 MKD34_02885 (EarP)   Cetobacterium somerae CS2105-BJ UPO97798.1    
 HQ393_07420 (EarP)   Chitinibacter bivalviorum 2T18 QLG88097.1    
 HZU75_02940 (EarP)   Chitinibacter fontanus STM-7 QLI80571.1    
 FNU76_02585 (EarP)   Chitinimonas arctica R3-44 QDQ25329.1    
 H9L41_12650 (EarP)   Chitinimonas koreensis R2A43-10 QNM94786.1    
 N8I74_15020 (EarP)   Chitiniphilus purpureus CD1 UXY14621.1    
 CH06BL_15830   Chromobacterium haemolyticum CH06-BL BBH12335.1    
 OK026_05415 (EarP)   Chromobacterium haemolyticum UGAL515B_03 WON84950.1    
 JOS77_01155 (fragment)   Chromobacterium haemolyticum WI5 UGA38483.1    
 FYK34_02280 (EarP)   Chromobacterium paludis 257-1 QEL54478.1    
 DK842_14465 (EarP)   Chromobacterium phragmitis IIBBL 112-1 AXE30983.1    
 IEZ30_07575 (EarP)   Chromobacterium rhizoryzae Bb2 QOD84324.1    
 D1345_07215 (EarP)   Chromobacterium rhizoryzae JP2-74 AXT45980.1    
 CXB49_15425   Chromobacterium sp. ATCC 53434 AUH52109.1    
 HQN78_09655 (EarP)   Chromobacterium sp. Beijing UJB31297.1    
 DK843_20020 (EarP)   Chromobacterium sp. IIBBL 274-1 AXE36376.1    
 NKT35_00890 (EarP)   Chromobacterium sp. IIBBL 290-4 UTH74702.1    
 DXT74_17705 (EarP)   Chromobacterium sp. Rain0013 QOZ84764.1    
 BKX93_19850   Chromobacterium vaccinii 21-1 AOZ52021.1    
 ChrSW_4125   Chromobacterium vaccinii GIMC1601:ChrSima_w QND86351.1    
 ChrSV_4125   Chromobacterium vaccinii GIMC1602:ChrSima_v QND91582.1    
 CFN79_11165   Chromobacterium vaccinii XC0014 AVG16361.1    
 CRN81_06365   Chromobacterium violaceum CV1192 ATP28044.1    
 CR207_06380   Chromobacterium violaceum CV1197 ATP31954.1    
 FOB43_03085 (EarP)   Chromobacterium violaceum FDAARGOS_635 QIY78256.1    
 NCTC9695_01917 (fragment)   Chromobacterium violaceum NCTC9695 VEB41484.1    
 LT85_1848   Collimonas arenae Cal35 AIY41006.1    
 CAter282_1630   Collimonas arenae Ter282 AMP09412.1    
 CFU_2766   Collimonas fungivorans Ter331 AEK62593.1    
 CFter6_3478   Collimonas fungivorans Ter6 AMO96111.1    
 CPter291_1865   Collimonas pratensis Ter291 AMP14131.1    
 CPter91_1834   Collimonas pratensis Ter91 AMP04207.1    
 LN050_00815   Comamonadaceae bacterium M7527 UFS56465.1    
 os1_27340   Comamonadaceae bacterium OS-1 BDT68549.1    
 os4_15550   Comamonadaceae bacterium OS-4 BDT72023.1    
 NF681_07370 (EarP)   Comamonadaceae bacterium OTU4NAUVB1 UST54997.1    
 HUK68_11615 (EarP)   Comamonas antarctica 16-35-5 QKV53482.1    
 KXJ72_10275 (EarP)   Comamonas aquatica B1 QXW17253.1    
 MA05_12370   Comamonas aquatica CJG ANY62736.1    
 KAQ61_09835 (EarP)   Comamonas aquatica NEB418 QTX19403.1    
 M2J84_12315 (EarP)   Comamonas aquatica NY8661 WBM40922.1    
 M9799_01495 (EarP)   Acidovorax sp. 5MLIR UYG51952.1    
 FOZ74_12520 (EarP)   Comamonas flocculans NLF-7-7 QEA13788.1    
 H8N02_13375 (EarP)   Comamonas kerstersii 3132976 QTW18162.1    
 B5M06_00270   Comamonas kerstersii 8943 AQZ96936.1    
 LAD35_14910 (EarP)   Comamonas odontotermitis WLL UBB16107.1    
 HS961_09005 (EarP)   Comamonas piscis BIGb0172 QMV72968.1    
 QMY55_08710 (EarP)   Comamonas resistens ZM22 WHS67183.1    
 CCO03_08165   Comamonas serinivorans DSM 26136 ARU04649.1    
 MPZ60_09255 (EarP)   Comamonas sp. 7D-2 UNV97378.1    
 MP576_17150 (EarP)   Comamonas sp. 7D-2evo1 UNV89323.1    
 MP579_17155 (EarP)   Comamonas sp. 7D-2evo2 UNV98967.1    
 MJ205_13660 (EarP)   Comamonas sp. B21-038 ULR87506.1    
 NOX35_09735 (EarP)   Comamonas sp. C11 UUC95546.1    
 KUD94_06800 (EarP)   Comamonas sp. NLF-1-9 QXL85651.1    
 N4T19_23010 (EarP)   Comamonas sp. PR12 UXC18516.1    
 KUF54_04495 (EarP)   Comamonas sp. Y33R10-2 QXZ10491.1    
 CT3_27880   Comamonas terrigena NBRC 13299 BBL25333.1    
 CtCNB1_1669   Comamonas testosteroni CNB-2 CNB-1 ACY32415.1    
 SR914_25035 (EarP)   Comamonas testosteroni DSMZ 14576 WQG66377.1    
 IYN88_22455 (EarP)   Comamonas testosteroni G1 QQN69416.1    
 U0024_09655 (EarP)   Comamonas testosteroni HAMBI_0403 WQD45008.1    
 QYQ99_03345 (EarP)   Comamonas testosteroni MWF001 WKL16604.1    
 O987_10480   Comamonas testosteroni TK102 AIJ46220.1    
 LZ683_10265 (EarP)   Comamonas testosteroni X13 WEE79709.1    
 CTYAZ2_32380   Comamonas testosteroni YAZ2 BCX53658.1    
 MJ608_01745 (EarP)   Comamonas thiooxydans CHJ01 UUE94426.1    
 LCH15_08815 (EarP)   Comamonas thiooxydans CSUSB4 UBQ43552.1    
 Cthiooxydans_16840   Comamonas thiooxydans NR4028 BDB69272.1    
 CTR2_R17370 (EarP)   Comamonas thiooxydans R2 BDR08399.1    
 INP81_09115 (EarP)   Comamonas thiooxydans ZDHYF418 QOQ83957.1    
 LVJ77_06375   Conchiformibius kuhniae 17694 UOP04101.1    
 H3L98_00490 (EarP)   Conchiformibius steedae DSM 2580 QMT33564.1    
 LNQ82_03420   Conchiformibius steedae DSM 2580 URD68223.1    
 DWG20_10035 (EarP)   Crenobacter cavernae K1W11S-77 AXK39752.1    
 RR42_m2842   Cupriavidus basilensis 4G11 AJG20216.1    
 F7R26_013680 (EarP)   Cupriavidus basilensis CCUG 49340 QOT75267.1    
 M5D45_11225 (EarP)   Cupriavidus campinensis G5 URF03117.1    
 KZ686_13940 (EarP)   Cupriavidus cauae PHS1 UZN48823.1    
 CR3_1843   Cupriavidus gilardii CR3 ALD91056.1    
 FOB47_19740 (EarP)   Cupriavidus gilardii FDAARGOS_639 QKS64054.1    
 QWJ31_15035 (EarP)   Cupriavidus gilardii M5 WNG71461.1    
 K6V71_11420 (EarP)   Cupriavidus gilardii nov-21 UXZ37334.1    
 K7A44_23075 (EarP)   Cupriavidus gilardii OV 21 UXZ50803.1    
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