GlycosylTransferase Family 104

Activities in FamilyDTDP-L-Rha: α-L-rhamnosyltransferase (EC 2.4.1.-);
Mechanism Inverting
NoteLassak et al. identified EarP as EF-P arginine R32 specific rhamnosyl transferase in Shewanella oneidensis using dTDP-b-L-rhamnose as donor substrate (PMID=25686373). The results of this study were subsequently confirmed for Pseudomonas aeruginosa (PMID=26060278), Pseudomonas putida (PMID=28951478) and Neisseria meningitidis (PMID=26840407). In 2016, it has been shown for S. oneidensis (PMID=28451135) and P. aeruginosa (PMID=28451332) that the enzyme is an inverting glycosyltransferase, thus mediating the formation of an a-L-rhamnosidic linkage. A structural basis for the arginine glycosylation reaction was provided by Krafczyk, Macosek and coworkers by having solved the crystal structure of the GT-B folding EarP from P. putida and an accompanying biochemical analysis of the enzyme (PMID=28951478).
Statistics GenBank accession (3953); Uniprot accession (4); PDB accession (12); 3D entries (4); cryst (0)
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Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 INQ48_10945 (EarP)   Variovorax paradoxus VAI-C QRF59700.1    
 IG196_09950 (EarP)   Variovorax sp. 38R QOF80669.1    
 VAR608DRAFT_6419   Variovorax sp. HW608 SCK59351.1    
 AX767_16780   Variovorax sp. PAMC 28711 AMM25824.1    
 H7F35_22930 (EarP)   Variovorax sp. PAMC26660 QNK66041.1    
 H7F36_21180 (EarP)   Variovorax sp. PAMC28562 QNK73564.1    
 E5CHR_01766   Variovorax sp. PBL-E5 VTU24309.1    
 H6CHR_04144   Variovorax sp. PBL-H6 VTU34138.1    
 H4CHR_04459   Variovorax sp. PBS-H4 VTU38557.1    
 JVX96_24650 (EarP)   Variovorax sp. PDNC026 QRY31229.1    
 C4F17_00315 (EarP)   Variovorax sp. PMC12 AVQ79505.1    
 RA8CHR_04368   Variovorax sp. RA8 VTU31474.1    
 GNX71_10285 (EarP)   Variovorax sp. RKNM96 QSI29950.1    
 SRS16CHR_01683   Variovorax sp. SRS16 VTU16082.1    
 WDL1CHR_01305   Variovorax sp. WDL1 VTV10301.1    
 GJQ55_03095 (EarP)   Venatoribacter cucullus ASxL5 QQD23530.1    
 GAY96_03090 (EarP)   Venatoribacter cucullus ASxS5 UZK02962.1    
 VITFI_CDS2378   Vitreoscilla filiformis ATCC 15551 ASM78156.1    
 LVJ82_14095 (EarP)   Vitreoscilla massiliensis SN4 UOO88584.1    
 ADP71_07620 (fragment)   Vitreoscilla sp. C1 AUZ04516.1
AUZ04516.2
   
 LVJ81_09030   Vitreoscilla stercoraria SAG 1488-6 UOO91773.1    
 PSELUDRAFT_0064   Vogesella sp. LIG4 SCK05098.1    
 LCH97_07595 (EarP)   Vogesella sp. XCS3 UDM18516.1    
 MIS45_06465   Wielerella bovis CCUG 44465 ULJ68453.1    
 GT347_19895 (EarP)   Xylophilus rhododendri KACC 21265 QHJ00047.1    
 R9X41_05070 (EarP)   Xylophilus sp. GOD-11R WPB58018.1    
 AZF00_11365   Zhongshania aliphaticivorans SM2 AMO68862.1    
 C3497_14475 (EarP)   Zoogloeaceae bacteirum Par-f-2 AVZ80498.1    
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