GlycosylTransferase Family 104

Activities in FamilydTDP-β-L-Rhap : arginine α-L-rhamnosyltransferase (EC 2.4.1.-)
Mechanism Inverting
NoteLassak et al. identified EarP as EF-P arginine R32 specific rhamnosyl transferase in Shewanella oneidensis using dTDP-b-L-rhamnose as donor substrate (PMID=25686373). The results of this study were subsequently confirmed for Pseudomonas aeruginosa (PMID=26060278), Pseudomonas putida (PMID=28951478) and Neisseria meningitidis (PMID=26840407). In 2016, it has been shown for S. oneidensis (PMID=28451135) and P. aeruginosa (PMID=28451332) that the enzyme is an inverting glycosyltransferase, thus mediating the formation of an a-L-rhamnosidic linkage. A structural basis for the arginine glycosylation reaction was provided by Krafczyk, Macosek and coworkers by having solved the crystal structure of the GT-B folding EarP from P. putida and an accompanying biochemical analysis of the enzyme (PMID=28951478).
Statistics GenBank accession (2404); Uniprot accession (0); PDB accession (9); 3D entries (3); cryst (0)
All (2396) Bacteria (2396) Structure (3) Characterized (4)
| 1 | ... | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | ... | 24 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 FY116_10450 (EarP)   Cellvibrio japonicus ADPT2-NIGEROSE QEI16177.1    
 FY117_10445 (EarP)   Cellvibrio japonicus ADPT3-ISOMALTOSE QEI12603.1    
 CJA_2148   Cellvibrio japonicus Ueda107 ACE85380.1    
 D0C16_06530 (EarP)   Cellvibrio sp. KY-GH-1 QEY15654.1    
 D0B88_14895 (EarP)   Cellvibrio sp. KY-YJ-3 QEY13418.1    
 CBR65_01855   Cellvibrio sp. PSBB006 ARU26277.1    
 B0D95_06595   Cellvibrio sp. PSBB023 AQT59789.1    
 HZU75_02940 (EarP)   Chitinibacter fontanus STM-7 QLI80571.1    
 HQ393_07420 (EarP)   Chitinibacter sp. 2T18 QLG88097.1    
 FNU76_02585 (EarP)   Chitinimonas arctica R3-44 QDQ25329.1    
 H9L41_12650 (EarP)   Chitinimonas koreensis R2A43-10 QNM94786.1    
 CH06BL_15830   Chromobacterium haemolyticum CH06-BL BBH12335.1    
 FYK34_02280 (EarP)   Chromobacterium paludis 257-1 QEL54478.1    
 DK842_14465 (EarP)   Chromobacterium phragmitis IIBBL 112-1 AXE30983.1    
 IEZ30_07575 (EarP)   Chromobacterium rhizoryzae Bb2 QOD84324.1    
 D1345_07215 (EarP)   Chromobacterium rhizoryzae JP2-74 AXT45980.1    
 CXB49_15425   Chromobacterium sp. ATCC 53434 AUH52109.1    
 DK843_20020 (EarP)   Chromobacterium sp. IIBBL 274-1 AXE36376.1    
 DXT74_17705 (EarP)   Chromobacterium sp. Rain0013 QOZ84764.1    
 BKX93_19850   Chromobacterium vaccinii 21-1 AOZ52021.1    
 CFN79_11165   Chromobacterium vaccinii XC0014 AVG16361.1    
 CRN81_06365   Chromobacterium violaceum CV1192 ATP28044.1    
 CR207_06380   Chromobacterium violaceum CV1197 ATP31954.1    
 FOB43_03085 (EarP)   Chromobacterium violaceum FDAARGOS_635 QIY78256.1    
 NCTC9695_01917 (fragment)   Chromobacterium violaceum NCTC9695 VEB41484.1    
 LT85_1848   Collimonas arenae Cal35 AIY41006.1    
 CAter282_1630   Collimonas arenae Ter282 AMP09412.1    
 CFU_2766   Collimonas fungivorans Ter331 AEK62593.1    
 CFter6_3478   Collimonas fungivorans Ter6 AMO96111.1    
 CPter291_1865   Collimonas pratensis Ter291 AMP14131.1    
 CPter91_1834   Collimonas pratensis Ter91 AMP04207.1    
 MA05_12370   Comamonas aquatica CJG ANY62736.1    
 B5M06_00270   Comamonas kerstersii 8943 AQZ96936.1    
 HS961_09005 (EarP)   Comamonas piscis BIGb0172 QMV72968.1    
 CCO03_08165   Comamonas serinivorans DSM 26136 ARU04649.1    
 FOZ74_12520 (EarP)   Comamonas sp. NLF-7-7 QEA13788.1    
 CT3_27880   Comamonas terrigena NBRC 13299 BBL25333.1    
 CtCNB1_1669   Comamonas testosteroni CNB-2 CNB-1 ACY32415.1    
 IYN88_22455 (EarP)   Comamonas testosteroni G1 QQN69416.1    
 O987_10480   Comamonas testosteroni TK102 AIJ46220.1    
 INP81_09115 (EarP)   Comamonas thiooxydans ZDHYF418 QOQ83957.1    
 H3L98_00490 (EarP)   Conchiformibius steedae DSM 2580 QMT33564.1    
 DWG20_10035 (EarP)   Crenobacter cavernae K1W11S-77 AXK39752.1    
 RR42_m2842   Cupriavidus basilensis 4G11 AJG20216.1    
 F7R26_013680 (EarP)   Cupriavidus basilensis CCUG 49340 QOT75267.1    
 CR3_1843   Cupriavidus gilardii CR3 ALD91056.1    
 FOB47_19740 (EarP)   Cupriavidus gilardii FDAARGOS_639 QKS64054.1    
 BKK80_15505   Cupriavidus malaysiensis USMAA1020 AOZ07065.1    
 DDF84_012760 (EarP)   Cupriavidus metallidurans BS1 QBP10556.1    
 Rmet_2411   Cupriavidus metallidurans CH34 ABF09288.1    
 FOB83_13600 (EarP)   Cupriavidus metallidurans FDAARGOS_675 QGS29838.1    
 C3Z06_24620 (EarP)   Cupriavidus metallidurans Ni-2 AVA36483.1    
 A2G96_15970   Cupriavidus nantongensis X1 AMR79114.1    
 H16_A2548   Cupriavidus necator H16 CAJ93631.1
QCC01416.1
   
 CNE_1c24320   Cupriavidus necator N-1 AEI77751.1    
 BJN34_13670   Cupriavidus necator NH9 AQV94924.1    
 CBM2607_12297   Cupriavidus neocaledonicus SPD47357.1    
 JTE92_24280 (EarP)   Cupriavidus oxalaticus Ox1 QRQ93205.1    
 JTE91_17980 (EarP)   Cupriavidus oxalaticus Ox1_mCherry QRQ88468.1    
 D2917_24170 (EarP)   Cupriavidus oxalaticus T2 QEZ47240.1    
 E0W60_22075 (EarP)   Cupriavidus oxalaticus X32 QBY53736.1    
 EHF44_11310 (EarP)   Cupriavidus pauculus FDAARGOS_614 AZG13984.1    
 FOB72_02950 (EarP)   Cupriavidus pauculus FDAARGOS_664 QET01101.1    
 Reut_A2245   Cupriavidus pinatubonensis JMP134 AAZ61608.1    
 BKK79_17445   Cupriavidus sp. USMAA2-4 AOY93389.1    
 BKK81_14555   Cupriavidus sp. USMAHM13 AOZ00319.1    
 RALTA_A2049   Cupriavidus taiwanensis LMG 19424 CAQ69989.1    
 Csp_E36710 (fragment)   Curvibacter putative symbiont of Hydra magnipapillata CBA26583.1    
 AEP_00819   Curvibacter sp. AEP1-3 ARV17776.1    
 Daro_2036   Dechloromonas aromatica RCB AAZ46781.1    
 HT580_06065 (EarP)   Dechloromonas sp. QKV56841.1    
 HYN24_07220 (EarP)   Dechloromonas sp. HYN0024 AXS79827.1    
 GBK02_10205 (EarP)   Dechloromonas sp. TW-R-39-2 QRM19751.1    
 HQN60_10320 (EarP)   Deefgea sp. D17 QKJ67058.1    
 I6H54_08205 (EarP)   Delftia acidovorans FDAARGOS_997 QQB52226.1    
 CHL79_21215   Delftia acidovorans RAY209 ATH14767.1    
 Daci_2872   Delftia acidovorans SPH-1 ABX35510.1    
 I6G47_09815 (EarP)   Delftia lacustris FDAARGOS_890 QPS83334.1    
 JQN63_20480 (EarP)   Delftia lacustris R54 QRI88707.1    
 DelCs14_3860   Delftia sp. Cs1-4 AEF90848.1    
 BO996_13265   Delftia sp. HK171 APE48745.1    
 BI380_09090   Delftia tsuruhatensis CM13 AOV05859.1    
 GCS91_19510 (EarP)   Delftia tsuruhatensis TR1180 QFS66344.1    
 DENOEST_1716   Denitratisoma oestradiolicum DSM 16959 CAB1368881.1    
 B9N43_03330   Denitratisoma sp. DHT3 QDX80378.1    
 H9K75_21205 (EarP)   Diaphorobacter aerolatus KACC 16536 QNP48432.1    
 BA022_01890   Diaphorobacter polyhydroxybutyrativorans SL-205 ASI67438.1    
 H9K76_15710 (EarP)   Diaphorobacter ruginosibacter DSM 27467 QNN56020.1    
 G7047_04515 (EarP)   Diaphorobacter sp. HDW4A QIL79249.1    
 G7048_20030 (EarP)   Diaphorobacter sp. HDW4B QIL72445.1    
 HND92_12875 (EarP)   Diaphorobacter sp. JS3050 QJY33772.1    
 I3K84_00635 (EarP)   Diaphorobacter sp. JS3051 QPN31203.1    
 HH213_00640 (EarP)   Duganella sp. AF9R3 QJD88750.1    
 HH212_16690 (EarP)   Duganella sp. GN2-R2 QJE01469.1    
 ELB75_00610 (fragment)   Eikenella corrodens KCOM 3110 AZR60732.1    
 SAMEA4412678_01032   Eikenella corrodens NCTC10596 SNW08453.1    
 EZJ17_09025 (fragment)   Eikenella exigua PXX QED92974.1    
 DM558_08900 (EarP)   Entomomonas moraniae QZS01 AZS50891.1    
 JHT90_10960 (EarP)   Entomomonas sp. F2A QQP84912.1    
 DTO96_101936   Ephemeroptericola cinctiostellae F02 AXF86190.1    
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