GlycosylTransferase Family 104

Activities in FamilydTDP-β-L-Rhap : arginine α-L-rhamnosyltransferase (EC 2.4.1.-)
Mechanism Inverting
NoteLassak et al. identified EarP as EF-P arginine R32 specific rhamnosyl transferase in Shewanella oneidensis using dTDP-b-L-rhamnose as donor substrate (PMID=25686373). The results of this study were subsequently confirmed for Pseudomonas aeruginosa (PMID=26060278), Pseudomonas putida (PMID=28951478) and Neisseria meningitidis (PMID=26840407). In 2016, it has been shown for S. oneidensis (PMID=28451135) and P. aeruginosa (PMID=28451332) that the enzyme is an inverting glycosyltransferase, thus mediating the formation of an a-L-rhamnosidic linkage. A structural basis for the arginine glycosylation reaction was provided by Krafczyk, Macosek and coworkers by having solved the crystal structure of the GT-B folding EarP from P. putida and an accompanying biochemical analysis of the enzyme (PMID=28951478).
Statistics GenBank accession (2176); Uniprot accession (0); PDB accession (9); 3D entries (3); cryst (0)
All (2172) Bacteria (2172) Structure (3) Characterized (4)
| 1 | ... | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | ... | 22 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 FIT64_03100   Candidatus Methylopumilus planktonicus MMS-VI-255 QDD10832.1    
 FIT65_03340   Candidatus Methylopumilus planktonicus MMS-VI-257 QDD09533.1    
 FIT61_03830   Candidatus Methylopumilus rimovensis MMS-RI-1 QDD13574.1    
 FIT62_03880   Candidatus Methylopumilus rimovensis MMS-RI-41 QDD12268.1    
 BN1209_0702   Candidatus Methylopumilus turicensis MMS-10A-171 CEN55746.1    
 FIT82_03055   Candidatus Methylopumilus universalis MMS-RII-56 QDC81464.1    
 FIT83_02990   Candidatus Methylopumilus universalis MMS-RIV-17 QDC80163.1    
 FIT90_02980   Candidatus Methylopumilus universalis MMS-RIV-25 QDC67953.1    
 FIT98_02985   Candidatus Methylopumilus universalis MMS-RIV-28 QDC55997.1    
 FIT85_03005   Candidatus Methylopumilus universalis MMS-RIV-30 QDC75726.1    
 FIT91_02980   Candidatus Methylopumilus universalis MMS-RIV-46 QDC65377.1    
 FIT95_02985   Candidatus Methylopumilus universalis MMS-RIV-48 QDC42331.1    
 FIT87_03005   Candidatus Methylopumilus universalis MMS-RIV-50 QDC73154.1    
 FIT79_03035   Candidatus Methylopumilus universalis MMS-RIV-52 QDC89208.1    
 FIT97_02980   Candidatus Methylopumilus universalis MMS-RIV-57 QDC54717.1    
 FIT80_03100   Candidatus Methylopumilus universalis MMS-RIV-60 QDC90509.1    
 FIT84_03040   Candidatus Methylopumilus universalis MMS-RIV-70 QDC78881.1    
 FIT89_03010   Candidatus Methylopumilus universalis MMS-RVI-12 QDC66665.1    
 FIT81_03055   Candidatus Methylopumilus universalis MMS-RVI-13 QDC87903.1    
 FIT86_03005   Candidatus Methylopumilus universalis MMS-RVI-16 QDC74440.1    
 FIT92_02980   Candidatus Methylopumilus universalis MMS-RVI-34 QDC58570.1    
 FIT93_02980   Candidatus Methylopumilus universalis MMS-RVI-37 QDC59857.1    
 FIT94_02980   Candidatus Methylopumilus universalis MMS-RVI-51 QDC41040.1    
 FIT88_02975   Candidatus Methylopumilus universalis MMS-RVI-8 QDC69241.1    
 FIT96_02980   Candidatus Methylopumilus universalis MMS-RVI-9 QDC57280.1    
 FIT72_03030   Candidatus Methylopumilus universalis MMS-VA-83 QDC70541.1    
 FIT70_03105   Candidatus Methylopumilus universalis MMS-VB-103 QDC98914.1    
 FIT75_03125   Candidatus Methylopumilus universalis MMS-VB-110 QDC71840.1    
 FIT78_03150   Candidatus Methylopumilus universalis MMS-VB-60 QDC97617.1    
 FIT77_03075   Candidatus Methylopumilus universalis MMS-VB-8 QDC96298.1    
 FIT76_03075   Candidatus Methylopumilus universalis MMS-VB-91 QDC47308.1    
 FIT73_02990   Candidatus Methylopumilus universalis MMS-VI-126 QDC51015.1    
 FIT74_03040   Candidatus Methylopumilus universalis MMS-VI-25 QDC61151.1    
 FIT71_03020   Candidatus Methylopumilus universalis MMS-VI-38 QDC46014.1    
 NITFAB_0894   Candidatus Nitrotoga fabula SPS05304.1    
 W01_11490   Candidatus Nitrotoga sp. AM1P BBJ23222.1    
 C3B55_00681   Candidatus Pseudomonas adelgestsugas QAX82005.1    
 FY115_10445 (EarP)   Cellvibrio japonicus ADPT1-KOJIBIOSE QEI19755.1    
 FY116_10450 (EarP)   Cellvibrio japonicus ADPT2-NIGEROSE QEI16177.1    
 FY117_10445 (EarP)   Cellvibrio japonicus ADPT3-ISOMALTOSE QEI12603.1    
 CJA_2148   Cellvibrio japonicus Ueda107 ACE85380.1    
 D0C16_06530 (EarP)   Cellvibrio sp. KY-GH-1 QEY15654.1    
 D0B88_14895 (EarP)   Cellvibrio sp. KY-YJ-3 QEY13418.1    
 CBR65_01855   Cellvibrio sp. PSBB006 ARU26277.1    
 B0D95_06595   Cellvibrio sp. PSBB023 AQT59789.1    
 HZU75_02940 (EarP)   Chitinibacter fontanus STM-7 QLI80571.1    
 HQ393_07420 (EarP)   Chitinibacter sp. 2T18 QLG88097.1    
 FNU76_02585 (EarP)   Chitinimonas arctica R3-44 QDQ25329.1    
 CH06BL_15830   Chromobacterium haemolyticum CH06-BL BBH12335.1    
 D1345_07215 (EarP)   Chromobacterium rhizoryzae JP2-74 AXT45980.1    
 FYK34_02280 (EarP)   Chromobacterium sp. 257-1 QEL54478.1    
 CXB49_15425   Chromobacterium sp. ATCC 53434 AUH52109.1    
 DK842_14465 (EarP)   Chromobacterium sp. IIBBL 112-1 AXE30983.1    
 DK843_20020 (EarP)   Chromobacterium sp. IIBBL 274-1 AXE36376.1    
 BKX93_19850   Chromobacterium vaccinii 21-1 AOZ52021.1    
 CFN79_11165   Chromobacterium vaccinii XC0014 AVG16361.1    
 CRN81_06365   Chromobacterium violaceum CV1192 ATP28044.1    
 CR207_06380   Chromobacterium violaceum CV1197 ATP31954.1    
 FOB43_03085 (EarP)   Chromobacterium violaceum FDAARGOS_635 QIY78256.1    
 NCTC9695_01917 (fragment)   Chromobacterium violaceum NCTC9695 VEB41484.1    
 LT85_1848   Collimonas arenae Cal35 AIY41006.1    
 CAter282_1630   Collimonas arenae Ter282 AMP09412.1    
 CFU_2766   Collimonas fungivorans Ter331 AEK62593.1    
 CFter6_3478   Collimonas fungivorans Ter6 AMO96111.1    
 CPter291_1865   Collimonas pratensis Ter291 AMP14131.1    
 CPter91_1834   Collimonas pratensis Ter91 AMP04207.1    
 MA05_12370   Comamonas aquatica CJG ANY62736.1    
 B5M06_00270   Comamonas kerstersii 8943 AQZ96936.1    
 CCO03_08165   Comamonas serinivorans DSM 26136 ARU04649.1    
 FOZ74_12520 (EarP)   Comamonas sp. NLF-7-7 QEA13788.1    
 CT3_27880   Comamonas terrigena NBRC 13299 BBL25333.1    
 CtCNB1_1669   Comamonas testosteroni CNB-2 CNB-1 ACY32415.1    
 O987_10480   Comamonas testosteroni TK102 AIJ46220.1    
 DWG20_10035 (EarP)   Crenobacter cavernae K1W11S-77 AXK39752.1    
 RR42_m2842   Cupriavidus basilensis 4G11 AJG20216.1    
 CR3_1843   Cupriavidus gilardii CR3 ALD91056.1    
 FOB47_19740 (EarP)   Cupriavidus gilardii FDAARGOS_639 QKS64054.1    
 BKK80_15505   Cupriavidus malaysiensis USMAA1020 AOZ07065.1    
 DDF84_012760 (EarP)   Cupriavidus metallidurans BS1 QBP10556.1    
 Rmet_2411   Cupriavidus metallidurans CH34 ABF09288.1    
 FOB83_13600 (EarP)   Cupriavidus metallidurans FDAARGOS_675 QGS29838.1    
 C3Z06_24620 (EarP)   Cupriavidus metallidurans Ni-2 AVA36483.1    
 A2G96_15970   Cupriavidus nantongensis X1 AMR79114.1    
 H16_A2548   Cupriavidus necator H16 CAJ93631.1
QCC01416.1
   
 CNE_1c24320   Cupriavidus necator N-1 AEI77751.1    
 BJN34_13670   Cupriavidus necator NH9 AQV94924.1    
 D2917_24170 (EarP)   Cupriavidus oxalaticus T2 QEZ47240.1    
 E0W60_22075 (EarP)   Cupriavidus oxalaticus X32 QBY53736.1    
 EHF44_11310 (EarP)   Cupriavidus pauculus FDAARGOS_614 AZG13984.1    
 FOB72_02950 (EarP)   Cupriavidus pauculus FDAARGOS_664 QET01101.1    
 Reut_A2245   Cupriavidus pinatubonensis JMP134 AAZ61608.1    
 BKK79_17445   Cupriavidus sp. USMAA2-4 AOY93389.1    
 BKK81_14555   Cupriavidus sp. USMAHM13 AOZ00319.1    
 RALTA_A2049   Cupriavidus taiwanensis LMG 19424 CAQ69989.1    
 Csp_E36710 (fragment)   Curvibacter putative symbiont of Hydra magnipapillata CBA26583.1    
 AEP_00819   Curvibacter sp. AEP1-3 ARV17776.1    
 Daro_2036   Dechloromonas aromatica RCB AAZ46781.1    
 HT580_06065 (EarP)   Dechloromonas sp. QKV56841.1    
 HYN24_07220 (EarP)   Dechloromonas sp. HYN0024 AXS79827.1    
 HQN60_10320 (EarP)   Deefgea sp. D17 QKJ67058.1    
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