Glycoside Hydrolase Family 13 / Subf 4

Activities in Familyα-amylase (EC 3.2.1.1); pullulanase (EC 3.2.1.41); cyclomaltodextrin glucanotransferase (EC 2.4.1.19); cyclomaltodextrinase (EC 3.2.1.54); trehalose-6-phosphate hydrolase (EC 3.2.1.93); oligo-α-glucosidase (EC 3.2.1.10); maltogenic amylase (EC 3.2.1.133); neopullulanase (EC 3.2.1.135); α-glucosidase (EC 3.2.1.20); maltotetraose-forming α-amylase (EC 3.2.1.60); isoamylase (EC 3.2.1.68); glucodextranase (EC 3.2.1.70); maltohexaose-forming α-amylase (EC 3.2.1.98); maltotriose-forming α-amylase (EC 3.2.1.116); branching enzyme (EC 2.4.1.18); trehalose synthase (EC 5.4.99.16); 4-α-glucanotransferase (EC 2.4.1.25); maltopentaose-forming α-amylase (EC 3.2.1.-) ; amylosucrase (EC 2.4.1.4) ; sucrose phosphorylase (EC 2.4.1.7); malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141); isomaltulose synthase (EC 5.4.99.11); malto-oligosyltrehalose synthase (EC 5.4.99.15); amylo-α-1,6-glucosidase (EC 3.2.1.33); α-1,4-glucan: phosphate α-maltosyltransferase (EC 2.4.99.16); 6'-P-sucrose phosphorylase (EC 2.4.1.-); amino acid transporter
Activities in Sub Family
Mechanism Retaining
ClanGH-H
3D Structure Status( β / α ) 8
Catalytic Nucleophile/BaseAsp (experimental)
Catalytic Proton DonorGlu (experimental)
NoteNew: many members have been assigned to subfamilies as described by Stam et al. (2006) Protein Eng Des Sel. 19, 555-562 (PMID: 17085431)
External resourcesCAZypedia; EBI Protein of the Month; HOMSTRAD; PDB Molecule of the Month; PRINTS;
Commercial Enzyme Provider(s)MEGAZYME; PROZOMIX;
Statistics GenBank accession (493); Uniprot accession (71); PDB accession (25); 3D entries (6); cryst (0)
| 1 | 2 | 3 | 4 | 5 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 Glaag_3800   Glaciecola sp. 4H-3-7+YE-5 AEE24727.1     4
 IMCC3135_12780 (AmS)   Granulosicoccus antarcticus IMCC3135 ASJ72644.1     4
 Halhy_0248   Haliscomenobacter hydrossis DSM 1100 AEE48160.1     4
 A9404_07600   Halothiobacillus sp. LS2 ANJ67265.1     4
 Haur_1153   Herpetosiphon aurantiacus DSM 785 ABX03801.1 A9B0T1   4
 Tcr_1797   Hydrogenovibrio crunogenus XCL-2 ABB42389.1 Q31EN4   4
 Intca_1805   Intrasporangium calvum DSM 43043 ADU48317.1     4
 GJA_338 (SupH)   Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 CDG80999.1     4
 BN2497_6429   Janthinobacterium sp. CG23_2 CUI21439.1     4
 CNX70_27360   Janthinobacterium svalbardensis PAMC 27463 ATD64101.1     4
 SAMN05892883_0922   Jatrophihabitans sp. GAS493 SOD71394.1     4
 AS188_02605   Kocuria flava HO-9041 ALU41010.1     4
 KPaMU14_11950   Kocuria palustris MU14/1 ALB04523.1     4
 KPaMU14_00335   Kocuria palustris MU14/1 ALB04123.1     4
 A4V08_30270   Lachnoclostridium sp. YL32 ANU50683.1     4
 AT746_11010   Lacimicrobium alkaliphilum YelD216 ALS98748.1     4
 Lcho_3322   Leptothrix cholodnii SP-6 ACB35580.1 B1Y2C7   4
 L103DPR2_02701 (AmS)   Limnohabitans sp. 103DPR2 ALK93079.1     4
 MAGMO_3056 (AmS)   magneto-ovoid bacterium MO-1 CRH07200.1     4
 Mmc1_3514   Magnetococcus marinus MC-1 ABK45999.1 A0LDF6   4
 CJ263_09105   Maribacter cobaltidurans B1 ASV30358.1     4
 YQ22_07115   Maribacter sp. 1_2014MBL_MicDiv APA64107.1     4
 SAMN05192545_3614   Maribacter sp. MAR_2009_60 SDT38735.1     4
 BTR34_07425   Maribacter sp. T28 APQ17167.1     4
 MARPU_12220   Marichromatium purpuratum 984 987 AHF04521.1     4
 Marme_0811   Marinomonas mediterranea MMB-1 ADZ90094.1     4
 Mmwyl1_0324   Marinomonas sp. MWYL1 ABR69264.1 A6VS35   4
 Ga0123461_1715   Mariprofundus aestuarium CP-5 ATX80128.1     4
 SAMN04488570_0028   Marmoricola scoriae DSM 22127 SDR69039.1     4
 C9I28_07390   Massilia armeniaca ZMN-3 AVR95571.1     4
 MHY_22520 (fragment)   Megamonas hypermegale ART12/1 CBL06893.1 D4KEU6   4
 MHY_22530 (fragment)   Megamonas hypermegale ART12/1 CBL06894.1 D4KEU7   4
 SAMEA4364220_01211 (AmS)   Megamonas hypermegale NCTC10570 SNU99921.1     4
 Mrub_0308   Meiothermus ruber DSM 1279 ADD27086.1
AGK03540.1
D3PLX5   4
 Mesil_0972   Meiothermus silvanus DSM 9946 ADH62881.1 D7BCJ6   4
 Mtai_v1c25460   Meiothermus taiwanensis WR-220 AWR87774.1     4
 amylosucrase (MFAS;Mfla_2611) 2.4.1.4 Methylobacillus flagellatus KT ABE50875.1 Q1GY12   4
 MEALZ_0617 (AmS)   Methylomicrobium alcaliphilum 20Z CCE22312.1     4
 JT25_011195   Methylomonas denitrificans FJG1 AMK77046.1     4
 Metme_2278   Methylomonas methanica MC09 AEG00682.1     4
 Q7C_244   Methylophaga frappieri AFJ01423.1     4
 Q7A_1567   Methylophaga nitratireducenticrescens AFI84393.1     4
 CDW43_07655   Methylophaga nitratireducenticrescens GP59 AUZ84466.1     4
 ACJ67_09830   Methylophilus sp. TWE2 AKR43695.1     4
 Msip34_2764   Methylovorus glucosetrophus SIP3-4 ACT52001.1 C6XBN1   4
 MPQ_2707   Methylovorus sp. MP688 ADQ85847.1 E4QPX7   4
 BOH66_03665   Microbacterium aurum KACC 15219 APZ33470.1     4
 A8L33_01210   Microbacterium chocolatum SIT 101 ANG84201.1     4
 CXR34_03380   Microbacterium hominis SJTG1 AUG28593.1     4
 BO218_02655   Microbacterium paludicola CC3 APF35603.1     4
 SAMN04489810_1127   Microbacterium pygmaeum DSM 23142 SDG72916.1     4
 BJP65_14070   Microbacterium sp. BH-3-3-3 AOX46781.1     4
 MTES_2750   Microbacterium testaceum StLB037 BAJ75714.1     4
 MalAC0309_2102   Microcella alkaliphila JAM AC0309 BAU32945.1     4
 MLP_47400   Microlunatus phosphovorus NM-1 BAK37754.1     4
 MODMU_1463 (AmS)   Modestobacter marinus BC501 CCH86912.1     4
 MgSA37_03961 (AmS)   Mucilaginibacter gotjawali SA3-7 BAU55769.1     4
 VC82_1226   Muricauda lutaonensis CC-HSB-11 AKA34861.1     4
 Namu_1690   Nakamurella multipartita DSM 44233 ACV78080.1 C8XFW9   4
 SAMN04515671_0035   Nakamurella panacisegetis P4-7,KCTC 19426,CECT 7604 SDO17386.1     4
 amylosucrase (Ams)   Neisseria meningitidis 93246 AAM51152.1 Q84HD6   4
 NM96_02705   Neisseria mucosa ATCC 19696 AVR78414.1     4
 amylosucrase (Ams)   Neisseria polysaccharea 85322 AAM51153.1 Q84HD5
Q9ZEU2
5N6V[A]
5N7J[A]
4
 amylosucrase (Ams;NpAS) 2.4.1.4 Neisseria polysaccharea ATCC 43768 AAT15258.1
AAW13710.1
ACK26675.1
CAA03058.1
CAA03083.1
CAA09772.1
E2PEX2
Q9ZEU2
1G5A[A]
1JG9[A]
1JGI[A]
1MVY[A]
1MW0[A]
1MW1[A]
1MW2[A]
1MW3[A]
1S46[A]
1ZS2[A]
3UEQ[A]
4FLO[A]
4FLQ[A]
4FLR[A]
4FLS[A]
4
 A6J88_08035   Neisseria sicca FDAARGOS_260 ARC51184.1     4
 CGZ65_06180   Neisseria sp. 10022 ATD65018.1     4
 BG910_00095   Neisseria sp. 10023 ASK26357.1     4
 Nhal_3534   Nitrosococcus halophilus Nc 4 ADE16558.1 D5C1X0   4
 Noc_0218   Nitrosococcus oceani ATCC 19707 ABA56748.1 Q3JEJ8   4
 Nwat_2902   Nitrosococcus watsonii C-113 ADJ29644.1 D8KBJ7   4
 NAL212_0461   Nitrosomonas sp. AL212 ADZ25406.1     4
 Nit79A3_2495   Nitrosomonas sp. Is79A3 AEJ02266.1     4
 ATY38_03515   Nitrosomonas ureae Nm10 ALQ50384.1     4
 SAMN06296273_1762   Nitrosomonas ureae Nm15 SNX60300.1     4
 Y958_28840   Nitrospirillum amazonense CBAmc ASG24984.1     4
 C0V82_05515   Niveispirillum cyanobacteriorum TH16 AUN29738.1     4
 Noca_1267   Nocardioides sp. JS614 ABL80781.1 A1SG46   4
 NOS3756_56330   Nostoc sp. NIES-3756 BAT56621.1     4
 VN12_23140 (AmS)   Pirellula sp. SH-Sr6A AMV35041.1     4
 Plim_3684   Planctopirus limnophila DSM 3776 ADG69496.1 D5SVY6   4
 BCB70_00975   Propionibacterium sp. oral taxon 193 F0672 AOH44712.1     4
 HME7025_01967   Pseudarcicella sp. HME7025 AWL09816.1     4
 amylosucrase (AcAS;Achl_3605) 2.4.1.4 Pseudarthrobacter chlorophenolicus A6 ACL41561.1 B8H6N5   4
 SAMN04489743_4041   Pseudarthrobacter equi IMMIB L-1606 SDT62492.1     4
 Asphe3_36570   Pseudarthrobacter phenanthrenivorans Sphe3 ADX74758.1     4
 Patl_3820   Pseudoalteromonas atlantica T6c ABG42320.1 Q15P68   4
 HMPREF9154_0828 (AmS)   Pseudopropionibacterium propionicum F0230a AFN46375.1     4
 Ping_0305   Psychromonas ingrahamii 37 ABM02171.1 A1SRQ6   4
 TI83_03970   Rathayibacter toxicus 70137 AJM78342.1     4
 APU90_02500   Rathayibacter toxicus WAC3373 ALS58233.1     4
 A6122_0871   Rathayibacter tritici NCPPB 1953 AND16024.1     4
 REIFOR_03159 (AglA)   Reinekea forsetii Hel1_31_D35 ATX78269.1     4
 ATY27_05280   Rheinheimera sp. F8 ALZ75225.1     4
 ATY27_11670   Rheinheimera sp. F8 ALZ76350.1     4
 ALSL_0045   Rhodanobacteraceae bacterium Dysh456 BBD78724.1     4
 A3L23_03053 (AmS)   Rhodococcus fascians D188 AMY54386.1     4
 NY08_4996   Rhodococcus sp. B7740 AJW42996.1     4
 A3Q40_02350 (AmS)   Rhodococcus sp. PBTS 1 AMY19723.1     4
 A3Q41_00275 (AmS)   Rhodococcus sp. PBTS 2 AMY21599.1     4
 RA876_16675   Rhodoferax antarcticus DSM 24876 APW47710.1     4
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