Glycoside Hydrolase Family 13 / Subf 4

Activities in Familyα-amylase (EC 3.2.1.1); pullulanase (EC 3.2.1.41); cyclomaltodextrin glucanotransferase (EC 2.4.1.19); cyclomaltodextrinase (EC 3.2.1.54); trehalose-6-phosphate hydrolase (EC 3.2.1.93); oligo-α-glucosidase (EC 3.2.1.10); maltogenic amylase (EC 3.2.1.133); neopullulanase (EC 3.2.1.135); α-glucosidase (EC 3.2.1.20); maltotetraose-forming α-amylase (EC 3.2.1.60); isoamylase (EC 3.2.1.68); glucodextranase (EC 3.2.1.70); maltohexaose-forming α-amylase (EC 3.2.1.98); maltotriose-forming α-amylase (EC 3.2.1.116); branching enzyme (EC 2.4.1.18); trehalose synthase (EC 5.4.99.16); 4-α-glucanotransferase (EC 2.4.1.25); maltopentaose-forming α-amylase (EC 3.2.1.-) ; amylosucrase (EC 2.4.1.4) ; sucrose phosphorylase (EC 2.4.1.7); malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141); isomaltulose synthase (EC 5.4.99.11); malto-oligosyltrehalose synthase (EC 5.4.99.15); amylo-α-1,6-glucosidase (EC 3.2.1.33); α-1,4-glucan: phosphate α-maltosyltransferase (EC 2.4.99.16); 6'-P-sucrose phosphorylase (EC 2.4.1.-); amino acid transporter
Activities in Sub Family
Mechanism Retaining
ClanGH-H
3D Structure Status( β / α ) 8
Catalytic Nucleophile/BaseAsp (experimental)
Catalytic Proton DonorGlu (experimental)
NoteNew: many members have been assigned to subfamilies as described by Stam et al. (2006) Protein Eng Des Sel. 19, 555-562 (PMID: 17085431)
External resourcesCAZypedia; EBI Protein of the Month; HOMSTRAD; PDB Molecule of the Month; PRINTS;
Commercial Enzyme Provider(s)MEGAZYME; PROZOMIX;
Statistics GenBank accession (409); Uniprot accession (71); PDB accession (24); 3D entries (6); cryst (0)
| 1 | 2 | 3 | 4 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 CCNA_01193   Caulobacter crescentus NA1000 ACL94658.1
ACL94658.2
B8H3N9   4
 AQ619_06785   Caulobacter henricii CB4 ALL15239.1     4
 CA607_06045   Caulobacter vibrioides CB1 ATC30615.1     4
 CA606_08260   Caulobacter vibrioides CB13b1a ATC34506.1     4
 CA608_05850   Caulobacter vibrioides CB2 ATC24077.1     4
 B0D95_20020   Cellvibrio sp. PSBB023 AQT62143.1     4
 Cagg_1307   Chloroflexus aggregans DSM 9485 ACL24215.1 B8G8F3   4
 Caur_2539   Chloroflexus aurantiacus J-10-fl ABY35745.1 A9WI54   4
 Chy400_2740   Chloroflexus sp. Y-400-fl ACM54129.1 B9LK79   4
 VO01_12975   Clavibacter michiganensis subsp. insidiosus R1-1 AJW79914.1     4
 CMM_2523 (fragment)   Clavibacter michiganensis subsp. michiganensis NCPPB 382 CAN02605.1 A5CU19   4
 CMN_02480   Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 type strain: NCPPB 2581 CCE76415.1     4
 CMS0587 (fragment)   Clavibacter michiganensis subsp. sepedonicus ATCC33113 CAQ00707.1 B0RDR4   4
 CGC65_19740   [Clostridium] bolteae ATCC BAA-613 ASN98897.1     4
 CCU_01540   Coprococcus sp. ART55/1 CBK82085.1 D5HH30   4
 ALW29_04475   Cutibacterium acnes PA_12_1_L1 ALT41948.1     4
 ALW27_04485   Cutibacterium acnes PA_12_1_R1 ALT39711.1     4
 ALW33_04635   Cutibacterium acnes PA_15_1_R1 ALT44236.1     4
 ALW23_04630   Cutibacterium acnes PA_15_2_L1 ALT37435.1     4
 ALW22_04530   Cutibacterium acnes PA_30_2_L1 ALT32866.1     4
 PALO_06565   Cutibacterium avidum 44067 AGJ77921.1     4
 BFS79_02590   Cutibacterium avidum DPC 6544 AOG27602.1     4
 Cyagr_0977   Cyanobium gracile PCC 6307 AFY28159.1     4
 PCC7424_3590   Cyanothece sp. PCC 7424 ACK71978.1 B7KGQ1   4
 AUC44_02855   Deinococcus actinosclerus BM2 ALW87966.1     4
 Deide_05900   Deinococcus deserti VCD115 ACO45430.1 C1D0Q6   4
 amylosucrase (DgAS;Dgeo_0572) 2.4.1.4 Deinococcus geothermalis DSM 11300 ABF44874.1
YP_604043.1
Q1J0W0 3UCQ[A]
3UER[A]
4
 DGo_CA0887   Deinococcus gobiensis I-0 AFD24814.1     4
 Deima_2728   Deinococcus maricopensis DSM 21211 ADV68358.1     4
 Deipe_2892   Deinococcus peraridilitoris DSM 19664 AFZ68353.1     4
 SU48_12345   Deinococcus puniceus DY1 ANE44420.1     4
 amylosucrase (AS;DrAS;DR0933) 2.4.1.4 Deinococcus radiodurans R1 AAF10510.1
ANC71873.1
NP_294657.1
Q9RVT9 4AYS[A] 4
 SY84_11600   Deinococcus soli Cha et al. 2016 N5 AKH17570.1     4
 QR90_04310   Deinococcus swuensis DY59 AIZ46461.1     4
 DAD186_03850   Dermabacter vaginalis AD1-86 ANP26942.1     4
 AAM4_0251   Desulfitobacterium hafniense CED90146.1     4
 HRM2_24260   Desulfobacterium autotrophicum HRM2 ACN15520.1 C0QFV2   4
 UWK_00550   Desulfocapsa sulfexigens DSM 10523 AGF77131.1     4
 Dmul_00750   Desulfococcus multivorans DSM 2059 AOY56851.1
AQU99394.1
    4
 Dbac_2914   Desulfomicrobium baculatum DSM 4028 ACU90989.1 C7LUS4   4
 DBW_2300   Desulfuromonas sp. DDH964 AMV72639.1     4
 ATSB10_30020   Dyella thiooxydans ATSB10 AND70456.1     4
 FP2_08630   Faecalibacterium prausnitzii L2-6 L2/6 CBK98444.1 D4K4K1   4
 SAMN05444157_0263   Frankineae bacterium MT45 SDI81045.1     4
 SAMN04488543_0481   Friedmanniella luteola DSM 21741 SDR79139.1     4
 SAMN04488544_0027   Friedmanniella sagamiharensis DSM 21743 SDU79696.1     4
 Fuma_03287 (AmS)   Fuerstia marisgermanicae NH11 APZ93669.1     4
 GM3708_3064   Geminocystis sp. NIES-3708 BAQ62658.1     4
 GM3709_1770   Geminocystis sp. NIES-3709 BAQ65005.1     4
 Gobs_3860   Geodermatophilus obscurus DSM 43160 ADB76432.1 D2SD83   4
 GNIT_1366   Glaciecola nitratireducens FR1064 AEP29490.1     4
 Glaag_3800   Glaciecola sp. 4H-3-7+YE-5 AEE24727.1     4
 IMCC3135_12780 (AmS)   Granulosicoccus antarcticus IMCC3135 ASJ72644.1     4
 Halhy_0248   Haliscomenobacter hydrossis DSM 1100 AEE48160.1     4
 A9404_07600   Halothiobacillus sp. LS2 ANJ67265.1     4
 Haur_1153   Herpetosiphon aurantiacus DSM 785 ABX03801.1 A9B0T1   4
 Tcr_1797   Hydrogenovibrio crunogenus XCL-2 ABB42389.1 Q31EN4   4
 Intca_1805   Intrasporangium calvum DSM 43043 ADU48317.1     4
 GJA_338 (SupH)   Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 CDG80999.1     4
 BN2497_6429   Janthinobacterium sp. CG23_2 CUI21439.1     4
 CNX70_27360   Janthinobacterium svalbardensis PAMC 27463 ATD64101.1     4
 SAMN05892883_0922   Jatrophihabitans sp. GAS493 SOD71394.1     4
 AS188_02605   Kocuria flava HO-9041 ALU41010.1     4
 KPaMU14_11950   Kocuria palustris MU14/1 ALB04523.1     4
 KPaMU14_00335   Kocuria palustris MU14/1 ALB04123.1     4
 A4V08_30270   Lachnoclostridium sp. YL32 ANU50683.1     4
 AT746_11010   Lacimicrobium alkaliphilum YelD216 ALS98748.1     4
 Lcho_3322   Leptothrix cholodnii SP-6 ACB35580.1 B1Y2C7   4
 L103DPR2_02701 (AmS)   Limnohabitans sp. 103DPR2 ALK93079.1     4
 MAGMO_3056 (AmS)   magneto-ovoid bacterium MO-1 CRH07200.1     4
 Mmc1_3514   Magnetococcus marinus MC-1 ABK45999.1 A0LDF6   4
 YQ22_07115   Maribacter sp. 1_2014MBL_MicDiv APA64107.1     4
 CJ263_09105   Maribacter sp. B1 ASV30358.1     4
 SAMN05192545_3614   Maribacter sp. MAR_2009_60 SDT38735.1     4
 BTR34_07425   Maribacter sp. T28 APQ17167.1     4
 MARPU_12220   Marichromatium purpuratum 984 987 AHF04521.1     4
 Marme_0811   Marinomonas mediterranea MMB-1 ADZ90094.1     4
 Mmwyl1_0324   Marinomonas sp. MWYL1 ABR69264.1 A6VS35   4
 SAMN04488570_0028   Marmoricola scoriae DSM 22127 SDR69039.1     4
 MHY_22520 (fragment)   Megamonas hypermegale ART12/1 CBL06893.1 D4KEU6   4
 MHY_22530 (fragment)   Megamonas hypermegale ART12/1 CBL06894.1 D4KEU7   4
 SAMEA4364220_01211 (AmS)   Megamonas hypermegale NCTC10570 SNU99921.1     4
 Mrub_0308   Meiothermus ruber DSM 1279 ADD27086.1
AGK03540.1
D3PLX5   4
 Mesil_0972   Meiothermus silvanus DSM 9946 ADH62881.1 D7BCJ6   4
 amylosucrase (MFAS;Mfla_2611) 2.4.1.4 Methylobacillus flagellatus KT ABE50875.1 Q1GY12   4
 MEALZ_0617 (AmS)   Methylomicrobium alcaliphilum 20Z CCE22312.1     4
 JT25_011195   Methylomonas denitrificans FJG1 AMK77046.1     4
 Metme_2278   Methylomonas methanica MC09 AEG00682.1     4
 Q7C_244   Methylophaga frappieri AFJ01423.1     4
 Q7A_1567   Methylophaga nitratireducenticrescens AFI84393.1     4
 ACJ67_09830   Methylophilus sp. TWE2 AKR43695.1     4
 Msip34_2764   Methylovorus glucosetrophus SIP3-4 ACT52001.1 C6XBN1   4
 MPQ_2707   Methylovorus sp. MP688 ADQ85847.1 E4QPX7   4
 BOH66_03665   Microbacterium aurum KACC 15219 APZ33470.1     4
 A8L33_01210   Microbacterium chocolatum SIT 101 ANG84201.1     4
 BO218_02655   Microbacterium paludicola CC3 APF35603.1     4
 SAMN04489810_1127   Microbacterium pygmaeum DSM 23142 SDG72916.1     4
 BJP65_14070   Microbacterium sp. BH-3-3-3 AOX46781.1     4
 MTES_2750   Microbacterium testaceum StLB037 BAJ75714.1     4
 MalAC0309_2102   Microcella alkaliphila JAM AC0309 BAU32945.1     4
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