Glycoside Hydrolase Family 13 / Subf 4

Activities in Familyα-amylase (EC 3.2.1.1); pullulanase (EC 3.2.1.41); cyclomaltodextrin glucanotransferase (EC 2.4.1.19); cyclomaltodextrinase (EC 3.2.1.54); trehalose-6-phosphate hydrolase (EC 3.2.1.93); oligo-α-glucosidase (EC 3.2.1.10); maltogenic amylase (EC 3.2.1.133); neopullulanase (EC 3.2.1.135); α-glucosidase (EC 3.2.1.20); maltotetraose-forming α-amylase (EC 3.2.1.60); isoamylase (EC 3.2.1.68); glucodextranase (EC 3.2.1.70); maltohexaose-forming α-amylase (EC 3.2.1.98); maltotriose-forming α-amylase (EC 3.2.1.116); branching enzyme (EC 2.4.1.18); trehalose synthase (EC 5.4.99.16); 4-α-glucanotransferase (EC 2.4.1.25); maltopentaose-forming α-amylase (EC 3.2.1.-) ; amylosucrase (EC 2.4.1.4) ; sucrose phosphorylase (EC 2.4.1.7); malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141); isomaltulose synthase (EC 5.4.99.11); malto-oligosyltrehalose synthase (EC 5.4.99.15); amylo-α-1,6-glucosidase (EC 3.2.1.33); α-1,4-glucan: phosphate α-maltosyltransferase (EC 2.4.99.16); 6'-P-sucrose phosphorylase (EC 2.4.1.-); amino acid transporter
Activities in Sub Family
Mechanism Retaining
ClanGH-H
3D Structure Status( β / α ) 8
Catalytic Nucleophile/BaseAsp (experimental)
Catalytic Proton DonorGlu (experimental)
NoteNew: many members have been assigned to subfamilies as described by Stam et al. (2006) Protein Eng Des Sel. 19, 555-562 (PMID: 17085431)
External resourcesCAZypedia; EBI Protein of the Month; HOMSTRAD; PDB Molecule of the Month; PRINTS;
Commercial Enzyme Provider(s)MEGAZYME; PROZOMIX;
Statistics GenBank accession (510); Uniprot accession (71); PDB accession (25); 3D entries (6); cryst (0)
| 1 | 2 | 3 | 4 | 5 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 HMPREF9154_0828 (AmS)   Pseudopropionibacterium propionicum F0230a AFN46375.1     4
 Ping_0305   Psychromonas ingrahamii 37 ABM02171.1 A1SRQ6   4
 TI83_03970   Rathayibacter toxicus 70137 AJM78342.1     4
 APU90_02500   Rathayibacter toxicus WAC3373 ALS58233.1     4
 A6122_0871   Rathayibacter tritici NCPPB 1953 AND16024.1     4
 REIFOR_03159 (AglA)   Reinekea forsetii Hel1_31_D35 ATX78269.1     4
 ATY27_05280   Rheinheimera sp. F8 ALZ75225.1     4
 ATY27_11670   Rheinheimera sp. F8 ALZ76350.1     4
 ALSL_0045   Rhodanobacteraceae bacterium Dysh456 BBD78724.1     4
 A3L23_03053 (AmS)   Rhodococcus fascians D188 AMY54386.1     4
 NY08_4996   Rhodococcus sp. B7740 AJW42996.1     4
 A3Q40_02350 (AmS)   Rhodococcus sp. PBTS 1 AMY19723.1     4
 A3Q41_00275 (AmS)   Rhodococcus sp. PBTS 2 AMY21599.1     4
 RA876_16675   Rhodoferax antarcticus DSM 24876 APW47710.1     4
 RB5196   Rhodopirellula baltica SH 1 CAD78342.1
NP_866561.1
Q7UGI7   4
 Riv7116_3088   Rivularia sp. PCC 7116 AFY55563.1     4
 RB2501_07655   Robiginitalea biformata HTCC2501 EAR16759.1 A4CIK1   4
 Plabr_0008   Rubinisphaera brasiliensis DSM 5305 ADY57640.1     4
 RradSPS_1086   Rubrobacter radiotolerans RSPS-4 AHY46369.1     4
 CK1_29400 (probable fragment)   Ruminococcus sp. SR1/5 CBL20810.1 D4LLU9   4
 RTO_06840   [Ruminococcus] torques L2-14 CBL25412.1 D4M2F0   4
 RTO_25240   [Ruminococcus] torques L2-14 CBL26996.1 D4LYY6   4
 L21SP2_2949   Salinispira pacifica L21-RPul-D2 AHC16295.1     4
 SAMD00079811_58210   Scytonema sp. HK-05 NIES-2130 BAY48200.1     4
 SB49_12990   Sediminicola sp. YIK13 ALM08617.1     4
 SGUI_1682   Serinicoccus sp. JLT9 ANS79078.1     4
 SA2016_1148   Sinomonas atrocyanea KCTC 3377 AMM31830.1     4
 CGQ25_02260   Sinomonas sp. R1AF57 ASN53838.1     4
 SpiGrapes_0317   Sphaerochaeta pleomorpha str. Grapes AEV28176.1     4
 DM480_12135 (fragment)   Sphingomonas sp. FARSPH AXJ96138.1     4
 DM480_04630 (fragment)   Sphingomonas sp. FARSPH AXJ94895.1     4
 Spiaf_0707   Spirochaeta africana DSM 8902 AFG36807.1     4
 HME9304_01319   Spongiibacterium sp. HME9304 AWX44319.1     4
 amylosucrase (AmsA;1986-orf;AMS;SYNPCC7002_A0885) 2.4.1.4 Synechococcus sp. PCC 7002 ACA98889.1
CDL67995.1
B1XIU7   4
 AWQ21_05200   Synechococcus sp. PCC 7003 ANV83829.1     4
 AWQ22_04530   Synechococcus sp. PCC 7117 ANV86795.1     4
 AWQ23_04585   Synechococcus sp. PCC 73109 AMA08652.1     4
 AWQ24_04530   Synechococcus sp. PCC 8807 ANV89953.1     4
 BM449_05045   Synechococcus sp. SynAce01 APD47744.1     4
 BK010_09455   Tenericutes bacterium MO-XQ AUD63804.1     4
 BK011_09165   Tenericutes bacterium MZ-XQ AUD65847.1     4
 RPIT_02530   Tessaracoccus flavus RP1T AQP43830.1     4
 BKM78_11660   Tessaracoccus sp. T2.5-30 AQX16487.1     4
 TVNIR_2794   Thioalkalivibrio nitratireducens DSM 14787 AGA34432.1     4
 THITH_13535   Thioalkalivibrio paradoxus ARh 1 AHE99110.1     4
 Thivi_1155   Thiocystis violascens DSM 198 AFL73185.1     4
 Thimo_2700   Thioflavicoccus mobilis 8321 AGA91411.1     4
 FOKN1_1963   Thiohalobacter thiocyanaticus FOKN1 BAZ94343.1     4
 Tola_1339   Tolumonas auensis DSM 9187 ACQ92955.1 C4LED8   4
 Spica_2119   Treponema caldarium DSM 7334 AEJ20244.1     4
 Trad_1031   Truepera radiovictrix DSM 17093 ADI14158.1 D7CVD0   4
 ORF   uncultured bacterium Contig1756 AHF24012.1     4
 ORF   uncultured bacterium Contig1795 AHF27202.1     4
 JV59_20465   Vibrio coralliilyticus OCN014 AIS57393.1     4
 IX92_18575   Vibrio coralliilyticus RE98 AIW21039.1     4
 A134_10745   Vibrio crassostreae 9CS106 ANP76860.1     4
 A9237_25475   Vibrio owensii XSBZ03 AQW61360.1     4
 BSZ05_20245   Vibrio shilonii QT6D1 ASI92146.1     4
 XALc_0730 (SuxB)   Xanthomonas albilineans GPE PC73 CBA15248.1     4
 AKJ12_14730   Xanthomonas arboricola pv. juglandis Xaj 417 AKU50901.1     4
 XACM_3382   Xanthomonas axonopodis pv. citrumelo F1 AEO43629.1     4
 sucrose hydrolase (Suh) 3.2.1.- Xanthomonas axonopodis pv. glycines 8RA AAQ93678.1 Q6UVM5 3CZE[A]
3CZG[A]
3CZK[A]
3CZL[A]
4
 XAC29_17775   Xanthomonas axonopodis Xac29-1 AGH78964.1     4
 XB05_12100   Xanthomonas campestris 17 AKC79396.1     4
 AAW18_16580   Xanthomonas campestris pv. campestris 17 ALE70977.1     4
 AEA01_03980   Xanthomonas campestris pv. campestris 4013 AKS22215.1     4
 AEA00_03945   Xanthomonas campestris pv. campestris ICMP 21080 AKS18200.1     4
 XC_0805   Xanthomonas campestris pv. campestris str. 8004 AAY47880.1 Q4UYJ3   4
 sucrose hydrolase (SuxB;XCC3359) 3.2.1.- Xanthomonas campestris pv. campestris str. ATCC 33913 AAM42629.1
NP_638705.1
Q8P5I2 2WPG[A] 4
 xcc-b100_0838 (SuH)   Xanthomonas campestris pv. campestris str. B100 CAP50181.1 Q8P5I2   4
 XCR_3697   Xanthomonas campestris pv. raphani 756C AEL08557.1     4
 XCV3618 (Suh)   Xanthomonas campestris pv. vesicatoria str. 85-10 CAJ25349.1
AOY66978.1
Q3BPG4   4
 AC028_15285   Xanthomonas citri pv. aurantifolii 1566 AMV08017.1     4
 TP37_03930   Xanthomonas citri pv. aurantifolii FDC 1559 AMU97349.1     4
 TP45_08710   Xanthomonas citri pv. aurantifolii FDC 1561 ARE56412.1     4
 TP50_04435   Xanthomonas citri pv. aurantifolii FDC 1609 AMV01780.1     4
 CLM98_19060   Xanthomonas citri pv. citri 03-1638-1-1 AUZ52390.1     4
 J152_03671   Xanthomonas citri pv. citri 5208 AJZ41303.1     4
 J165_04164   Xanthomonas citri pv. citri AW13 AJZ46248.1     4
 J166_04169   Xanthomonas citri pv. citri AW14 AJZ50868.1     4
 J167_04170   Xanthomonas citri pv. citri AW15 AJZ55489.1     4
 J168_04165   Xanthomonas citri pv. citri AW16 AJZ68279.1     4
 J170_03669   Xanthomonas citri pv. citri BL18 AJZ36836.1     4
 J171_03670   Xanthomonas citri pv. citri FB19 AJZ32372.1     4
 J154_03655   Xanthomonas citri pv. citri gd2 AJZ27933.1     4
 J155_03657   Xanthomonas citri pv. citri gd3 AJZ23509.1     4
 AB890_17595   Xanthomonas citri pv. citri jx-6 AKM26409.1     4
 J156_03653   Xanthomonas citri pv. citri jx4 AJZ19081.1     4
 J157_03658   Xanthomonas citri pv. citri jx5 AJZ14657.1     4
 BJD09_21220   Xanthomonas citri pv. citri LH201 APR26297.1     4
 BI316_20050   Xanthomonas citri pv. citri LH276 APR21475.1     4
 BI315_08665   Xanthomonas citri pv. citri LJ207-7 APR14925.1     4
 BI314_06230   Xanthomonas citri pv. citri LL074-4 APR09828.1     4
 J172_03668   Xanthomonas citri pv. citri mf20 AJZ10204.1     4
 J162_03657   Xanthomonas citri pv. citri MN10 AJZ05765.1     4
 J163_03652   Xanthomonas citri pv. citri MN11 AJZ01337.1     4
 J164_03653   Xanthomonas citri pv. citri MN12 AJY96913.1     4
 J169_03675   Xanthomonas citri pv. citri NT17 AJY92464.1     4
 sucrose hydrolase (XAC3490) 3.2.1.- Xanthomonas citri pv. citri str. 306 AAM38333.1
NP_643797.1
Q8PGX2   4
 B7L65_05020   Xanthomonas citri pv. citri TX160042 ARR16361.1     4
Top




Last update: 2018-08-08 © Copyright 1998-2018
AFMB - CNRS - Université d'Aix-Marseille