Glycoside Hydrolase Family 13 / Subf 13

Activities in Familyα-amylase (EC 3.2.1.1); pullulanase (EC 3.2.1.41); cyclomaltodextrin glucanotransferase (EC 2.4.1.19); cyclomaltodextrinase (EC 3.2.1.54); trehalose-6-phosphate hydrolase (EC 3.2.1.93); oligo-α-glucosidase (EC 3.2.1.10); maltogenic amylase (EC 3.2.1.133); neopullulanase (EC 3.2.1.135); α-glucosidase (EC 3.2.1.20); maltotetraose-forming α-amylase (EC 3.2.1.60); isoamylase (EC 3.2.1.68); glucodextranase (EC 3.2.1.70); maltohexaose-forming α-amylase (EC 3.2.1.98); maltotriose-forming α-amylase (EC 3.2.1.116); branching enzyme (EC 2.4.1.18); trehalose synthase (EC 5.4.99.16); 4-α-glucanotransferase (EC 2.4.1.25); maltopentaose-forming α-amylase (EC 3.2.1.-) ; amylosucrase (EC 2.4.1.4) ; sucrose phosphorylase (EC 2.4.1.7); malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141); isomaltulose synthase (EC 5.4.99.11); malto-oligosyltrehalose synthase (EC 5.4.99.15); amylo-α-1,6-glucosidase (EC 3.2.1.33); α-1,4-glucan: phosphate α-maltosyltransferase (EC 2.4.99.16); 6'-P-sucrose phosphorylase (EC 2.4.1.-); amino acid transporter
Activities in Sub Family
Mechanism Retaining
ClanGH-H
3D Structure Status( β / α ) 8
Catalytic Nucleophile/BaseAsp (experimental)
Catalytic Proton DonorGlu (experimental)
NoteNew: many members have been assigned to subfamilies as described by Stam et al. (2006) Protein Eng Des Sel. 19, 555-562 (PMID: 17085431)
External resourcesCAZypedia; EBI Protein of the Month; HOMSTRAD; PDB Molecule of the Month; PRINTS;
Commercial Enzyme Provider(s)MEGAZYME; PROZOMIX;
Statistics GenBank accession (1296); Uniprot accession (87); PDB accession (26); 3D entries (4); cryst (0)
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Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 CA210_04365   Raoultella ornithinolytica Ro24724 ASI57523.1     13
 TE10_06550   Raoultella ornithinolytica S12 AJF71746.1     13
 CRT62_22000   Raoultella planticola FDAARGOS_429 ATM07111.1     13
 CRN15_12850   Raoultella planticola FDAARGOS_430 ATM15678.1     13
 MC50_013000   Raoultella planticola FDAARGOS_64 AUU04697.1     13
 B1209_22340   Raoultella planticola GODA AUV55048.1     13
 NCTC13096_04299 (PulA)   Raoultella planticola NCTC13096 VEB76540.1     13
 DSD31_21055 (PulA)   Raoultella sp. X13 AXC31781.1     13
 NCTC13098_06109 (PulA)   Raoultella terrigena NCTC13098 VDR29690.1     13
 REIFOR_03063   Reinekea forsetii Hel1_31_D35 ATX78182.1     13
 REIFOR_02823   Reinekea forsetii Hel1_31_D35 ATX77944.1     13
 CPZ87_04205   Rhizobacter gummiphilus NBRC 109400 ATU63824.1     13
 CPZ87_04205   Rhizobacter gummiphilus NBRC 109400 ATU63824.1     13
 A4W93_04125   Rhizobacter gummiphilus NS21 ARN23719.1     13
 RD2015_3650   Roseateles depolymerans KCTC 42856 ALV08105.1     13
 RGE_02680 (PulA)   Rubrivivax gelatinosus IL144 BAL93613.1     13
 Sde_0560 (PulA)   Saccharophagus degradans 2-40 ABD79824.1 Q21NA5   13
 HMF8227_00564   Salinimonas sp. HMF8227 AWL11060.1     13
 D0Y50_08990   Salinimonas sp. N102 AXR08462.1     13
 Strop_3061   Salinispora tropica CNB-440 ABP55498.1 A4X9D1   13
 Sked_28060   Sanguibacter keddieii DSM 10542 ACZ22708.1 D1BB07   13
 SGUI_2936   Serinicoccus sp. JLT9 ANS80332.1     13
 SGUI_2935   Serinicoccus sp. JLT9 ANS80331.1     13
 WN53_25290   Serratia fonticola DSM 4576 AKG72167.1     13
 CRN79_18720   Serratia fonticola FDAARGOS_411 ATM77743.1     13
 AV650_21015   Serratia fonticola GS2 ALX95868.1     13
 NCTC13193_03918 (PulA)   Serratia fonticola NCTC13193 VEI72979.1     13
 D9980_11330 (PulA)   Serratia sp. 3ACOL1 AYM91126.1     13
 Sama_0287   Shewanella amazonensis SB2B ABL98498.1 A1S292   13
 type I pullulanase (Pul13A)   Shewanella arctica Kim et al. 2012 CED95594.1     13
 C8I07_14155   Shewanella baltica CW2 AVT48787.1     13
 Sbal195_1316   Shewanella baltica OS195 ABX48491.1 A9L5S4   13
 Sbal223_3074   Shewanella baltica OS223 ACK47559.1 B8EB17   13
 Sbal678_1347   Shewanella baltica OS678 ADT93524.1 D8CQW4   13
 SJ2017_3068   Shewanella japonica KCTC 22435 ARD23341.1     13
 swp_3411   Shewanella piezotolerans WP3 ACJ30110.1 B8CRV2   13
 NCTC10737_01206 (PulA)   Shewanella putrefaciens NCTC10737 VEF25159.1     13
 ORF   Shewanella sp. CAL34055.1     13
 EXU30_04250   Shewanella sp. D4-2 QBF81998.1     13
 M5M_09665   Simiduia agarivorans SA1 = DSM 21679 AFU99116.1     13
 STAUR_7135   Stigmatella aurantiaca DW4/3-1 ADO74891.1 E3FZ74   13
 C7M71_006815 (PulA)   Streptacidiphilus sp. DSM 106435 AXI77190.1     13
 DMT42_11300   Streptomyces actuosus ATCC 25421 AWT42851.1     13
 SMD11_4847 (fragment)   Streptomyces albireticuli SMD11 ARZ70440.1     13
 SMD11_4848 (fragment)   Streptomyces albireticuli SMD11 ARZ70441.1     13
 SMD44_01120   Streptomyces alboflavus MDJK44 ARX81722.1     13
 DC74_2710   Streptomyces albulus NK660 AIA03210.1     13
 SAZ_14825   Streptomyces albulus ZPM AKA03584.1     13
 XNR_4650   Streptomyces albus J1074 AGI90972.1     13
 Salbus254_4914   Streptomyces albus SM254 AMM11367.1     13
 SAM23877_2312   Streptomyces ambofaciens ATCC 23877 AKZ55361.1     13
 SAM40697_2113   Streptomyces ambofaciens DSM 40697 ANB06073.1     13
 DVA86_09410 (PulA)   Streptomyces armeniacus ATCC 15676 AXK32835.1     13
 C5746_12165   Streptomyces atratus SCSIO_ZH16 AXE77576.1     13
 BV401_14180   Streptomyces autolyticus CGMCC0516 AQA11463.1     13
 SAV5982 (AmyX)   Streptomyces avermitilis MA-4680 = NBRC 14893 BAC73694.1
NP_827159.1
    13
 EJC51_14825 (PulA)   Streptomyces brunneus CR22 AZP17282.1     13
 CVT27_07770   Streptomyces cavourensis 1AS2a ATY95401.1     13
 DTW94_07930 (PulA)   Streptomyces cavourensis TJ430 AXI71244.1     13
 D1794_21785 (PulA)   Streptomyces clavuligerus F1D-5 AXU15123.1     13
 BB341_20930   Streptomyces clavuligerus F613-1 ANW20496.1     13
 SCO2226 or SC10B7.21c   Streptomyces coelicolor A3(2) CAB90874.1
NP_626477.1
Q9KZ11   13
 B446_11665   Streptomyces collinus Tu 365 AGS69155.1     13
 TU94_09620   Streptomyces cyaneogriseus subsp. noncyanogenus NMWT 1 AJP01729.1     13
 BN159_6201   Streptomyces davaonensis JCM 4913 CCK30580.1     13
 C4B68_29085   Streptomyces dengpaensis XZHG99 AVH61497.1     13
 KY5_2221c   Streptomyces formicae KY5 ATL27239.1     13
 D3X13_02370 (PulA)   Streptomyces fradiae NKZ-259 AYA15255.1     13
 SFUL_1790   Streptomyces fulvissimus DSM 40593 AGK76758.1     13
 CNQ36_09910   Streptomyces fungicidicus TXX3120 AYL35728.1     13
 B1H19_13020   Streptomyces gilvosporeus F607 ARF55006.1     13
 SGLAU_10125   Streptomyces glaucescens GLA.O AIR98035.1     13
 WQO_08895   Streptomyces globisporus C-1027 ALU93464.1     13
 DIJ69_25395   Streptomyces globisporus TFH56 AWL88800.1     13
 C0216_24115   Streptomyces globosus LZH-48 AXE26134.1     13
 AVL59_38155   Streptomyces griseochromogenes ATCC 14511 ANP54645.1     13
 DWG14_06099 (AmY)   Streptomyces griseorubiginosus 3E-1 AYC41808.1     13
 ELQ87_28230 (PulA)   Streptomyces griseoviridis F1-27 AZS87680.1     13
 SGR_5281   Streptomyces griseus subsp. griseus NBRC 13350 BAG22110.1 B1VZI5   13
 DWB77_05490 (AmY)   Streptomyces hundungensis BH38 AYG83294.1     13
 SHJG_3716   Streptomyces hygroscopicus subsp. jinggangensis 5008 AEY88988.1     13
 SHJGH_3481   Streptomyces hygroscopicus subsp. jinggangensis TL01 AGF63146.1     13
 SHL15_2266   Streptomyces hygroscopicus subsp. limoneus KCTC 1717 ALO93424.1     13
 SHXM_03762   Streptomyces hygroscopicus XM201 AQW50299.1     13
 ABB07_27190   Streptomyces incarnatus NRRL 8089 AKJ13585.1     13
 SIRAN7129   Streptomyces iranensis CDR10957.1     13
 D0C37_25070 (PulA)   Streptomyces koyangensis VK-A60T AXQ57545.1     13
 SLA_1808   Streptomyces laurentii ATCC 31255 BAU82746.1     13
 SLAV_26105 (AmY)   Streptomyces lavendulae subsp. lavendulae CCM 3239 ATZ27013.1     13
 Sle_49320   Streptomyces leeuwenhoekii C34 (= DSM 42122 = NRRL B-24963) CQR64390.1     13
 SLCG_5859   Streptomyces lincolnensis LC-G AXG57014.1     13
 SLCG_5859   Streptomyces lincolnensis LC-G AXG57014.1     13
 SLINC_2554   Streptomyces lincolnensis NRRL 2936 ANS64778.1     13
 SLIV_26590 (AmY)   Streptomyces lividans TK24 AIJ16229.1     13
 SLUN_10955   Streptomyces lunaelactis MM109 AVZ77369.1     13
 EKH77_08670 (PulA)   Streptomyces luteoverticillatus CGMCC 15060 AZQ71276.1     13
 SMALA_2142   Streptomyces malaysiensis DSM 4137 ATL82376.1     13
 DC008_09470   Streptomyces nigra 452 AWE49933.1     13
 BBN63_25320   Streptomyces niveus SCSIO 3406 AQU69007.1     13
 SNOD_10325   Streptomyces nodosus ATCC 14899 AJE40397.1     13
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