Glycoside Hydrolase Family 13 / Subf 13

Activities in Familyα-amylase (EC 3.2.1.1); pullulanase (EC 3.2.1.41); cyclomaltodextrin glucanotransferase (EC 2.4.1.19); cyclomaltodextrinase (EC 3.2.1.54); trehalose-6-phosphate hydrolase (EC 3.2.1.93); oligo-α-glucosidase (EC 3.2.1.10); maltogenic amylase (EC 3.2.1.133); neopullulanase (EC 3.2.1.135); α-glucosidase (EC 3.2.1.20); maltotetraose-forming α-amylase (EC 3.2.1.60); isoamylase (EC 3.2.1.68); glucodextranase (EC 3.2.1.70); maltohexaose-forming α-amylase (EC 3.2.1.98); maltotriose-forming α-amylase (EC 3.2.1.116); branching enzyme (EC 2.4.1.18); trehalose synthase (EC 5.4.99.16); 4-α-glucanotransferase (EC 2.4.1.25); maltopentaose-forming α-amylase (EC 3.2.1.-) ; amylosucrase (EC 2.4.1.4) ; sucrose phosphorylase (EC 2.4.1.7); malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141); isomaltulose synthase (EC 5.4.99.11); malto-oligosyltrehalose synthase (EC 5.4.99.15); amylo-α-1,6-glucosidase (EC 3.2.1.33); α-1,4-glucan: phosphate α-maltosyltransferase (EC 2.4.99.16); amino acid transporter; [retaining] sucrose 6(F)-phosphate phosphorylase (EC 2.4.1.329); [retaining] glucosylglycerol phosphorylase (EC 2.4.1.359);
Activities in Sub Family
Mechanism Retaining
ClanGH-H
3D Structure Status( β / α ) 8
Catalytic Nucleophile/BaseAsp (experimental)
Catalytic Proton DonorGlu (experimental)
NoteNew: many members have been assigned to subfamilies as described by Stam et al. (2006) Protein Eng Des Sel. 19, 555-562 (PMID: 17085431)
External resourcesCAZypedia; EBI Protein of the Month; HOMSTRAD; PDB Molecule of the Month; PRINTS;
Commercial Enzyme Provider(s)MEGAZYME; PROZOMIX;
Statistics GenBank accession (1489); Uniprot accession (87); PDB accession (30); 3D entries (5); cryst (0)
| 1 | ... | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 CXB48_15420   Pseudomonas stutzeri SGAir0442 AVX14083.1     13
 AB691_3208   Pseudomonas stutzeri SLG510A3-8 AKN28082.1     13
 Psesu_1111   Pseudoxanthomonas suwonensis 11-1 ADV26961.1     13
 WQ53_13715   Pseudoxanthomonas suwonensis J1 AKC87655.1     13
 pullulanase (PulA;HMPREF9690_00740) 3.2.1.41 Raoultella ornithinolytica 10-5246 EHT13411.1   2YOC[A,B] 13
 AN237_13505   Raoultella ornithinolytica 18 AOO57474.1     13
 HY59_03770   Raoultella ornithinolytica A14 ANZ04521.1     13
 RORB6_14370   Raoultella ornithinolytica B6 AGJ87555.1     13
 CRN13_21135   Raoultella ornithinolytica FDAARGOS_431 ATM22735.1     13
 BK817_05305   Raoultella ornithinolytica MG APB04425.1     13
 CA210_04365   Raoultella ornithinolytica Ro24724 ASI57523.1     13
 TE10_06550   Raoultella ornithinolytica S12 AJF71746.1     13
 E4K08_20430 (PulA)   Raoultella ornithinolytica WLK218 QCK78776.1     13
 CRT62_22000   Raoultella planticola FDAARGOS_429 ATM07111.1     13
 CRN15_12850   Raoultella planticola FDAARGOS_430 ATM15678.1     13
 MC50_013000   Raoultella planticola FDAARGOS_64 AUU04697.1     13
 B1209_22340   Raoultella planticola GODA AUV55048.1     13
 NCTC13096_04299 (PulA)   Raoultella planticola NCTC13096 VEB76540.1     13
 F3X94_25135 (PulA)   Raoultella planticola S25 QEU44376.1     13
 NCTC9189_04548 (PulA)   Raoultella sp. NCTC 9189 VUC88559.1     13
 DSD31_21055 (PulA)   Raoultella sp. X13 AXC31781.1     13
 NCTC13098_06109 (PulA)   Raoultella terrigena NCTC13098 VDR29690.1     13
 REIFOR_03063   Reinekea forsetii Hel1_31_D35 ATX78182.1     13
 REIFOR_02823   Reinekea forsetii Hel1_31_D35 ATX77944.1     13
 CPZ87_04205   Rhizobacter gummiphilus NBRC 109400 ATU63824.1     13
 CPZ87_04205   Rhizobacter gummiphilus NBRC 109400 ATU63824.1     13
 A4W93_04125   Rhizobacter gummiphilus NS21 ARN23719.1     13
 RD2015_3650   Roseateles depolymerans KCTC 42856 ALV08105.1     13
 RGE_02680 (PulA)   Rubrivivax gelatinosus IL144 BAL93613.1     13
 Sde_0560 (PulA)   Saccharophagus degradans 2-40 ABD79824.1 Q21NA5   13
 D0Y50_08990   Salinimonas sediminis N102 AXR08462.1     13
 FBQ74_01410 (PulA)   Salinimonas sp. KX18D6 QCZ92212.1     13
 HMF8227_00564   Saliniradius amylolyticus HMF8227 AWL11060.1     13
 Strop_3061   Salinispora tropica CNB-440 ABP55498.1 A4X9D1   13
 FCN78_15815 (PulA)   Salinivibrio kushneri AL184 QCP03859.1     13
 E8E00_16915 (PulA)   Salinivibrio sp. YCSC6 QCF37861.1     13
 Sked_28060   Sanguibacter keddieii DSM 10542 ACZ22708.1 D1BB07   13
 ADJ76_04560   Schaalia meyeri W712 AKU65121.1     13
 FBF35_03785 (PulA)   Schaalia odontolytica XH001 QCT35216.1     13
 SGUI_2936   Serinicoccus sp. JLT9 ANS80332.1     13
 SGUI_2935   Serinicoccus sp. JLT9 ANS80331.1     13
 WN53_25290   Serratia fonticola DSM 4576 AKG72167.1     13
 CRN79_18720   Serratia fonticola FDAARGOS_411 ATM77743.1     13
 AV650_21015   Serratia fonticola GS2 ALX95868.1     13
 FD644_17985 (PulA)   Serratia fonticola MS5 QCR62125.1     13
 NCTC13193_03918 (PulA)   Serratia fonticola NCTC13193 VEI72979.1     13
 D9980_11330 (PulA)   Serratia sp. 3ACOL1 AYM91126.1     13
 Sama_0287   Shewanella amazonensis SB2B ABL98498.1 A1S292   13
 type I pullulanase (Pul13A)   Shewanella arctica Kim et al. 2012 CED95594.1     13
 C8I07_14155   Shewanella baltica CW2 AVT48787.1     13
 Sbal195_1316   Shewanella baltica OS195 ABX48491.1 A9L5S4   13
 Sbal223_3074   Shewanella baltica OS223 ACK47559.1 B8EB17   13
 Sbal678_1347   Shewanella baltica OS678 ADT93524.1 D8CQW4   13
 SJ2017_3068   Shewanella japonica KCTC 22435 ARD23341.1     13
 swp_3411   Shewanella piezotolerans WP3 ACJ30110.1 B8CRV2   13
 NCTC10737_01206 (PulA)   Shewanella putrefaciens NCTC10737 VEF25159.1     13
 ORF   Shewanella sp. CAL34055.1     13
 EXU30_04250   Shewanella sp. D4-2 QBF81998.1     13
 M5M_09665   Simiduia agarivorans SA1 = DSM 21679 AFU99116.1     13
 STAUR_7135   Stigmatella aurantiaca DW4/3-1 ADO74891.1 E3FZ74   13
 C7M71_006815 (PulA)   Streptacidiphilus sp. DSM 106435 AXI77190.1     13
 DMT42_11300   Streptomyces actuosus ATCC 25421 AWT42851.1     13
 FE156_23350 (PulA)   Streptomyces albidoflavus UYFA156 QDD61014.1     13
 SMD11_4847 (fragment)   Streptomyces albireticuli SMD11 ARZ70440.1     13
 SMD11_4848 (fragment)   Streptomyces albireticuli SMD11 ARZ70441.1     13
 SMD44_01120   Streptomyces alboflavus MDJK44 ARX81722.1     13
 CP975_09825 (PulA)   Streptomyces alboniger ATCC 12461 QEV17764.1     13
 DC74_2710   Streptomyces albulus NK660 AIA03210.1     13
 SAZ_14825   Streptomyces albulus ZPM AKA03584.1     13
 XNR_4650   Streptomyces albus J1074 AGI90972.1     13
 Salbus254_4914   Streptomyces albus SM254 AMM11367.1     13
 SAM23877_2312   Streptomyces ambofaciens ATCC 23877 AKZ55361.1     13
 SAM40697_2113   Streptomyces ambofaciens DSM 40697 ANB06073.1     13
 DVA86_09410 (PulA)   Streptomyces armeniacus ATCC 15676 AXK32835.1     13
 CD934_24430   Streptomyces asterosporus DSM 41452 QDI71469.1     13
 C5746_12165   Streptomyces atratus SCSIO_ZH16 AXE77576.1     13
 BV401_14180   Streptomyces autolyticus CGMCC0516 AQA11463.1     13
 SAV5982 (AmyX)   Streptomyces avermitilis MA-4680 = NBRC 14893 BAC73694.1
NP_827159.1
    13
 SAVMC3_68130   Streptomyces avermitilis MC3 BBJ54184.1     13
 EJC51_14825 (PulA)   Streptomyces brunneus CR22 AZP17282.1     13
 CVT27_07770   Streptomyces cavourensis 1AS2a ATY95401.1     13
 DTW94_07930 (PulA)   Streptomyces cavourensis TJ430 AXI71244.1     13
 CP983_31125 (PulA)   Streptomyces chartreusis ATCC 14922 QEV70651.1     13
 CP977_10015 (PulA)   Streptomyces cinereoruber ATCC 19740 QEV32470.1     13
 CRV15_21150   Streptomyces clavuligerus ATCC 27064 QCS07897.1     13
 D1794_21785 (PulA)   Streptomyces clavuligerus F1D-5 AXU15123.1     13
 BB341_20930   Streptomyces clavuligerus F613-1 ANW20496.1     13
 SCO2226 or SC10B7.21c   Streptomyces coelicolor A3(2) CAB90874.1
NP_626477.1
Q9KZ11   13
 FQ762_11360 (PulA)   Streptomyces coelicolor A3(2) CFB_NBC_0001 QFI42384.1     13
 CP976_12815 (PulA)   Streptomyces coeruleorubidus ATCC 13740 QEV24967.1     13
 B446_11665   Streptomyces collinus Tu 365 AGS69155.1     13
 TU94_09620   Streptomyces cyaneogriseus subsp. noncyanogenus NMWT 1 AJP01729.1     13
 BN159_6201   Streptomyces davaonensis JCM 4913 CCK30580.1     13
 C4B68_29085   Streptomyces dengpaensis XZHG99 AVH61497.1     13
 KY5_2221c   Streptomyces formicae KY5 ATL27239.1     13
 CP974_07610 (PulA)   Streptomyces fradiae ATCC 10745 = DSM 40063 QEV11912.1     13
 D3X13_02370 (PulA)   Streptomyces fradiae NKZ-259 AYA15255.1     13
 SFUL_1790   Streptomyces fulvissimus DSM 40593 AGK76758.1     13
 CNQ36_09910   Streptomyces fungicidicus TXX3120 AYL35728.1     13
 CP966_10015 (PulA)   Streptomyces galilaeus ATCC 14969 QEU65580.1     13
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