Glycoside Hydrolase Family 13 / Subf 13

Activities in Familyα-amylase (EC 3.2.1.1); pullulanase (EC 3.2.1.41); cyclomaltodextrin glucanotransferase (EC 2.4.1.19); cyclomaltodextrinase (EC 3.2.1.54); trehalose-6-phosphate hydrolase (EC 3.2.1.93); oligo-α-glucosidase (EC 3.2.1.10); maltogenic amylase (EC 3.2.1.133); neopullulanase (EC 3.2.1.135); α-glucosidase (EC 3.2.1.20); maltotetraose-forming α-amylase (EC 3.2.1.60); isoamylase (EC 3.2.1.68); glucodextranase (EC 3.2.1.70); maltohexaose-forming α-amylase (EC 3.2.1.98); maltotriose-forming α-amylase (EC 3.2.1.116); branching enzyme (EC 2.4.1.18); trehalose synthase (EC 5.4.99.16); 4-α-glucanotransferase (EC 2.4.1.25); maltopentaose-forming α-amylase (EC 3.2.1.-) ; amylosucrase (EC 2.4.1.4) ; sucrose phosphorylase (EC 2.4.1.7); malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141); isomaltulose synthase (EC 5.4.99.11); malto-oligosyltrehalose synthase (EC 5.4.99.15); amylo-α-1,6-glucosidase (EC 3.2.1.33); α-1,4-glucan: phosphate α-maltosyltransferase (EC 2.4.99.16); 6'-P-sucrose phosphorylase (EC 2.4.1.-); amino acid transporter
Activities in Sub Family
Mechanism Retaining
ClanGH-H
3D Structure Status( β / α ) 8
Catalytic Nucleophile/BaseAsp (experimental)
Catalytic Proton DonorGlu (experimental)
NoteNew: many members have been assigned to subfamilies as described by Stam et al. (2006) Protein Eng Des Sel. 19, 555-562 (PMID: 17085431)
External resourcesCAZypedia; EBI Protein of the Month; HOMSTRAD; PDB Molecule of the Month; PRINTS;
Commercial Enzyme Provider(s)MEGAZYME; PROZOMIX;
Statistics GenBank accession (766); Uniprot accession (87); PDB accession (19); 3D entries (3); cryst (0)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 PNIG_a3598   Pseudoalteromonas nigrifaciens KMM 661 ASM55473.1     13
 PP2015_3632   Pseudoalteromonas phenolica KCTC 12086 ALO44106.1     13
 D172_016350   Pseudoalteromonas sp. Bsw20308 ALQ09497.1     13
 Pmen_4105   Pseudomonas mendocina ymp ABP86852.1 A4XZT6   13
 PST_2963   Pseudomonas stutzeri A1501 ABP80609.1 A4VNQ8   13
 PSTAB_3005   Pseudomonas stutzeri ATCC 17588 = LMG 11199 AEJ06286.1     13
 A458_15510   Pseudomonas stutzeri CCUG 29243 AFM34327.1     13
 PSTAA_3129   Pseudomonas stutzeri DSM 4166 AEA85004.1     13
 Psest_1332   Pseudomonas stutzeri RCH2 AGA85890.1     13
 AB691_3208   Pseudomonas stutzeri SLG510A3-8 AKN28082.1     13
 Psesu_1111   Pseudoxanthomonas suwonensis 11-1 ADV26961.1     13
 WQ53_13715   Pseudoxanthomonas suwonensis J1 AKC87655.1     13
 pullulanase (PulA;HMPREF9690_00740) 3.2.1.41 Raoultella ornithinolytica 10-5246 EHT13411.1   2YOC[A,B] 13
 AN237_13505   Raoultella ornithinolytica 18 AOO57474.1     13
 HY59_03770   Raoultella ornithinolytica A14 ANZ04521.1     13
 RORB6_14370   Raoultella ornithinolytica B6 AGJ87555.1     13
 BK817_05305   Raoultella ornithinolytica MG APB04425.1     13
 CA210_04365   Raoultella ornithinolytica Ro24724 ASI57523.1     13
 TE10_06550   Raoultella ornithinolytica S12 AJF71746.1     13
 A4W93_04125   Rhizobacter gummiphilus NS21 ARN23719.1     13
 RD2015_3650   Roseateles depolymerans KCTC 42856 ALV08105.1     13
 RGE_02680 (PulA)   Rubrivivax gelatinosus IL144 BAL93613.1     13
 Sde_0560 (PulA)   Saccharophagus degradans 2-40 ABD79824.1 Q21NA5   13
 Strop_3061   Salinispora tropica CNB-440 ABP55498.1 A4X9D1   13
 Sked_28060   Sanguibacter keddieii DSM 10542 ACZ22708.1 D1BB07   13
 SGUI_2936   Serinicoccus sp. JLT9 ANS80332.1     13
 SGUI_2935   Serinicoccus sp. JLT9 ANS80331.1     13
 WN53_25290   Serratia fonticola DSM 4576 AKG72167.1     13
 AV650_21015   Serratia fonticola GS2 ALX95868.1     13
 Sama_0287   Shewanella amazonensis SB2B ABL98498.1 A1S292   13
 type I pullulanase (Pul13A)   Shewanella arctica Kim et al. 2012 CED95594.1     13
 Sbal195_1316   Shewanella baltica OS195 ABX48491.1 A9L5S4   13
 Sbal223_3074   Shewanella baltica OS223 ACK47559.1 B8EB17   13
 Sbal678_1347   Shewanella baltica OS678 ADT93524.1 D8CQW4   13
 SJ2017_3068   Shewanella japonica KCTC 22435 ARD23341.1     13
 swp_3411   Shewanella piezotolerans WP3 ACJ30110.1 B8CRV2   13
 ORF   Shewanella sp. CAL34055.1     13
 M5M_09665   Simiduia agarivorans SA1 = DSM 21679 AFU99116.1     13
 STAUR_7135   Stigmatella aurantiaca DW4/3-1 ADO74891.1 E3FZ74   13
 SMD11_4847 (fragment)   Streptomyces albireticuli SMD11 ARZ70440.1     13
 SMD11_4848 (fragment)   Streptomyces albireticuli SMD11 ARZ70441.1     13
 SMD44_01120   Streptomyces alboflavus MDJK44 ARX81722.1     13
 DC74_2710   Streptomyces albulus NK660 AIA03210.1     13
 SAZ_14825   Streptomyces albulus ZPM AKA03584.1     13
 XNR_4650   Streptomyces albus J1074 AGI90972.1     13
 Salbus254_4914   Streptomyces albus SM254 AMM11367.1     13
 SAM23877_2312   Streptomyces ambofaciens ATCC 23877 AKZ55361.1     13
 SAM40697_2113   Streptomyces ambofaciens DSM 40697 ANB06073.1     13
 BV401_14180   Streptomyces autolyticus CGMCC0516 AQA11463.1     13
 SAV5982 (AmyX)   Streptomyces avermitilis MA-4680 = NBRC 14893 BAC73694.1
NP_827159.1
    13
 BB341_20930   Streptomyces clavuligerus F613-1 ANW20496.1     13
 SCO2226 or SC10B7.21c   Streptomyces coelicolor A3(2) CAB90874.1
NP_626477.1
Q9KZ11   13
 B446_11665   Streptomyces collinus Tu 365 AGS69155.1     13
 TU94_09620   Streptomyces cyaneogriseus subsp. noncyanogenus NMWT 1 AJP01729.1     13
 BN159_6201   Streptomyces davawensis JCM 4913 CCK30580.1     13
 SFUL_1790   Streptomyces fulvissimus DSM 40593 AGK76758.1     13
 B1H19_13020   Streptomyces gilvosporeus F607 ARF55006.1     13
 SGLAU_10125   Streptomyces glaucescens GLA.O AIR98035.1     13
 WQO_08895   Streptomyces globisporus C-1027 ALU93464.1     13
 AVL59_38155   Streptomyces griseochromogenes ATCC 14511 ANP54645.1     13
 SGR_5281   Streptomyces griseus subsp. griseus NBRC 13350 BAG22110.1 B1VZI5   13
 SHJG_3716   Streptomyces hygroscopicus subsp. jinggangensis 5008 AEY88988.1     13
 SHJGH_3481   Streptomyces hygroscopicus subsp. jinggangensis TL01 AGF63146.1     13
 SHL15_2266   Streptomyces hygroscopicus subsp. limoneus KCTC 1717 ALO93424.1     13
 SHXM_03762   Streptomyces hygroscopicus XM201 AQW50299.1     13
 ABB07_27190   Streptomyces incarnatus NRRL 8089 AKJ13585.1     13
 SIRAN7129   Streptomyces iranensis CDR10957.1     13
 SLA_1808   Streptomyces laurentii ATCC 31255 BAU82746.1     13
 Sle_49320   Streptomyces leeuwenhoekii C34 (= DSM 42122 = NRRL B-24963) CQR64390.1     13
 SLINC_2554   Streptomyces lincolnensis NRRL 2936 ANS64778.1     13
 SLIV_26590 (AmY)   Streptomyces lividans TK24 AIJ16229.1     13
 BBN63_25320   Streptomyces niveus SCSIO 3406 AQU69007.1     13
 SNOD_10325   Streptomyces nodosus ATCC 14899 AJE40397.1     13
 SNOUR_29325   Streptomyces noursei ATCC 11455 ANZ19110.1     13
 B1H29_26270   Streptomyces pactum ACT12 AQS69917.1     13
 B1H29_04320   Streptomyces pactum ACT12 AQS66262.1     13
 Spa2297_09295   Streptomyces parvulus 2297 ANJ07184.1     13
 LK06_008080   Streptomyces pluripotens MUSC 135 ARP69929.1     13
 LK07_09180   Streptomyces pluripotens MUSC 137 ASN24184.1     13
 Sfla_4613   Streptomyces pratensis ATCC 33331 ADW06014.1 C9NEV2   13
 SPRI_1862   Streptomyces pristinaespiralis HCCB 10218 ALC20168.1     13
 BFF78_30060   Streptomyces puniciscabiei TW1S1 AOR34729.1     13
 M271_35285   Streptomyces rapamycinicus NRRL 5491 AGP58464.1     13
 TUE45_02765 (AmY)   Streptomyces reticuli CUW28035.1     13
 A4G23_01390 (AmY)   Streptomyces rubrolavendulae MJM4426 AOT58577.1     13
 SCAB_66701   Streptomyces scabiei 87.22 CBG73669.1 C9ZHE7   13
 CGL27_14925   Streptomyces sp. 11-1-2 ASQ94195.1     13
 SAMN05428941_2284   Streptomyces sp. 2114.2 SDT26901.1     13
 SAMN06272775_5118   Streptomyces sp. 2323.1 SOE14157.1     13
 SAMN05444521_6487   Streptomyces sp. 3124.6 SHI26537.1     13
 ASR50_10820   Streptomyces sp. 4F ALV49861.1     13
 GZL_06304 (fragment)   Streptomyces sp. 769 AJC58874.1     13
 T261_5931   Streptomyces sp. A02 AJT67547.1     13
 NI25_28050   Streptomyces sp. CCM_MD2014 AIV36854.1     13
 AS200_31710   Streptomyces sp. CdTB01 ALV36103.1     13
 ABE83_26930   Streptomyces sp. CFMR 7 ALC30278.1     13
 B1K54_11395   Streptomyces sp. fd1-xmd AQT76492.1     13
 SFR_5458   Streptomyces sp. FR-008 ALM42073.1     13
 M444_11350   Streptomyces sp. Mg1 AKL65906.1     13
 F750_2073   Streptomyces sp. PAMC 26508 AGJ54568.1     13
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