Glycoside Hydrolase Family 13 / Subf 13

Activities in Familyα-amylase (EC 3.2.1.1); pullulanase (EC 3.2.1.41); cyclomaltodextrin glucanotransferase (EC 2.4.1.19); cyclomaltodextrinase (EC 3.2.1.54); trehalose-6-phosphate hydrolase (EC 3.2.1.93); oligo-α-glucosidase (EC 3.2.1.10); maltogenic amylase (EC 3.2.1.133); neopullulanase (EC 3.2.1.135); α-glucosidase (EC 3.2.1.20); maltotetraose-forming α-amylase (EC 3.2.1.60); isoamylase (EC 3.2.1.68); glucodextranase (EC 3.2.1.70); maltohexaose-forming α-amylase (EC 3.2.1.98); maltotriose-forming α-amylase (EC 3.2.1.116); branching enzyme (EC 2.4.1.18); trehalose synthase (EC 5.4.99.16); 4-α-glucanotransferase (EC 2.4.1.25); maltopentaose-forming α-amylase (EC 3.2.1.-) ; amylosucrase (EC 2.4.1.4) ; sucrose phosphorylase (EC 2.4.1.7); malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141); isomaltulose synthase (EC 5.4.99.11); malto-oligosyltrehalose synthase (EC 5.4.99.15); amylo-α-1,6-glucosidase (EC 3.2.1.33); α-1,4-glucan: phosphate α-maltosyltransferase (EC 2.4.99.16); 6'-P-sucrose phosphorylase (EC 2.4.1.-); amino acid transporter
Activities in Sub Family
Mechanism Retaining
ClanGH-H
3D Structure Status( β / α ) 8
Catalytic Nucleophile/BaseAsp (experimental)
Catalytic Proton DonorGlu (experimental)
NoteNew: many members have been assigned to subfamilies as described by Stam et al. (2006) Protein Eng Des Sel. 19, 555-562 (PMID: 17085431)
External resourcesCAZypedia; EBI Protein of the Month; HOMSTRAD; PDB Molecule of the Month; PRINTS;
Commercial Enzyme Provider(s)MEGAZYME; PROZOMIX;
Statistics GenBank accession (1296); Uniprot accession (87); PDB accession (26); 3D entries (4); cryst (0)
| 1 | ... | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 Vch1786_I2195 (fragment)   Vibrio cholerae O1 str. 2010EL-1786 AET27779.1     13
 VC0395_A2273 (probable fragment)   Vibrio cholerae O395 ABQ20504.1 A5F4U0   13
 Sa5Y_VC00208 (PulA)   Vibrio cholerae Sa5Y AWB69454.1     13
 EN12_13105 (fragment)   Vibrio cholerae TSY216 AKO76150.1     13
 V060002_00234 (Pula_1) (fragment)   Vibrio cholerae V060002 BBE11394.1     13
 BA953_23030   Vibrio coralliilyticus 58 ANW27005.1     13
 JV59_20985   Vibrio coralliilyticus OCN014 AIS57484.1     13
 DVV14_23920 (PulA)   Vibrio coralliilyticus RE22 AXN34278.1     13
 IX92_18120   Vibrio coralliilyticus RE98 AIW20954.1     13
 A134_22880   Vibrio crassostreae 9CS106 ANP79181.1     13
 AL537_25790   Vibrio diabolicus FDAARGOS_105 AVF62670.1     13
 AL552_03725   Vibrio diabolicus FDAARGOS_96 AVF92944.1     13
 AL468_17680   Vibrio diabolicus LMG 3418 AVH29009.1     13
 AL475_00760   Vibrio fluvialis AK 1296-A2-1 AVH30541.1     13
 AL536_14140   Vibrio fluvialis ATCC 33809 AMF94597.1     13
 vfu_A00553   Vibrio furnissii NCTC 11218 ADT85765.1     13
 CU052_27305   Vibrio harveyi 345 AWB02855.1     13
 LA59_20570   Vibrio harveyi ATCC 33843 (392 [MAV]) AIV07835.1     13
 AL538_18495   Vibrio harveyi ATCC 43516 AMF99716.1     13
 BG259_27170   Vibrio harveyi isolate QT520 APP08904.1     13
 ECB94_26215 (PulA)   Vibrio mediterranei 117-T6 AYV24946.1     13
 BA891_15185   Vibrio natriegens CCUG 16371 ANQ18562.1     13
 BA893_16460   Vibrio natriegens CCUG 16373 ANQ23261.1     13
 BA894_18785   Vibrio natriegens CCUG 16374 ANQ28467.1     13
 PN96_15655   Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 ALR17431.1
ANQ14922.1
    13
 D0812_26995 (PulA)   Vibrio owensii 1700302 AYO17993.1     13
 D0856_29165 (PulA)   Vibrio owensii V180403 AYO23894.1     13
 A9237_25245   Vibrio owensii XSBZ03 AQW61315.1     13
 RK51_024455   Vibrio parahaemolyticus 10329 AUT89890.1     13
 D0871_20915 (PulA)   Vibrio parahaemolyticus 160807 AYO06763.1     13
 BMI84_21930   Vibrio parahaemolyticus 1682 APU76642.1     13
 Vp2S01_A1616   Vibrio parahaemolyticus 20130629002S01 AWG87101.1     13
 AL464_22060   Vibrio parahaemolyticus ATCC 17802 AMG09435.1     13
 VPBB_A1502   Vibrio parahaemolyticus BB22OP AGB12876.1     13
 VpaChn25_A1527   Vibrio parahaemolyticus CHN25 ANZ13112.1     13
 A6J30_19945   Vibrio parahaemolyticus FDAARGOS_191 ARC20734.1     13
 FORC4_4352   Vibrio parahaemolyticus FORC_004 ALM69325.1     13
 FORC6_4478   Vibrio parahaemolyticus FORC_006 ALG54804.1     13
 FORC8_4398   Vibrio parahaemolyticus FORC_008 AKU57958.1     13
 FORC14_4612   Vibrio parahaemolyticus FORC_014 ANC00309.1     13
 FORC18_4402   Vibrio parahaemolyticus FORC_018 APE87015.1     13
 FORC22_4643   Vibrio parahaemolyticus FORC_022 APC90504.1     13
 FORC23_4233   Vibrio parahaemolyticus FORC_023 AOV92776.1     13
 FORC71_4506   Vibrio parahaemolyticus FORC_071 AYF22878.1     13
 FORC72_4535   Vibrio parahaemolyticus FORC_072 AYF18266.1     13
 CO725_04730   Vibrio parahaemolyticus HA2 ATI44969.1     13
 YA91_07965   Vibrio parahaemolyticus MAVP-26 ASZ50508.1     13
 BGM07_008175   Vibrio parahaemolyticus MAVP-Q ASO14352.1     13
 CHR23_024825   Vibrio parahaemolyticus MAVP-R ASQ38982.1     13
 BSG32_24750   Vibrio parahaemolyticus MAVP-R AWA92211.1     13
 M636_07000   Vibrio parahaemolyticus O1:K33 str. CDC_K4557 AGQ97004.1     13
 M634_17650   Vibrio parahaemolyticus O1:Kuk str. FDA_R31 AGQ92735.1     13
 C7Y67_19615   Vibrio parahaemolyticus R13 AWJ80603.1     13
 C9I78_23525   Vibrio parahaemolyticus R14 AWG81707.1     13
 VPA1638   Vibrio parahaemolyticus RIMD 2210633 O3:K6 BAC62981.1
NP_801148.1
    13
 DA442_22605   Vibrio parahaemolyticus S107-1 AVW97748.1     13
 AB831_23710   Vibrio parahaemolyticus ST631 ANQ59130.1     13
 VPUCM_21460   Vibrio parahaemolyticus UCM-V493 AHJ02581.1     13
 D0853_23500 (PulA)   Vibrio parahaemolyticus VPD14 AZV73909.1     13
 CCZ37_05520   Vibrio qinghaiensis Q67 ASU22080.1     13
 BSZ04_03470   Vibrio rotiferianus B64D1 ASI94089.1     13
 BSZ04_02515   Vibrio rotiferianus B64D1 ASI93912.1     13
 BSZ05_23305   Vibrio shilonii QT6D1 ASI93343.1     13
 DBX26_21715   Vibrio sp. dhg AXT73550.1     13
 VEJY3_23761   Vibrio sp. EJY3 AEX25161.1     13
 VS_II0168   Vibrio tasmaniensis LGP32 CAV25476.1 B7VQD8   13
 IX91_19780   Vibrio tubiashii ATCC 19109 AIW16335.1     13
 VV93_v1c30670   Vibrio vulnificus 93U204 AIL72135.1     13
 AL549_01625   Vibrio vulnificus ATL 6-1306 AMG10059.1     13
 VVCECT4999_15980   Vibrio vulnificus CECT 4999 ASJ40205.1     13
 VV21233   Vibrio vulnificus CMCP6 AAO08130.1
NP_763140.1
    13
 E2I22_18955 (PulA)   Vibrio vulnificus CMCP6 QBN16202.1     13
 BJD94_18215   Vibrio vulnificus Env1 AVX01800.1     13
 FORC9_2952   Vibrio vulnificus FORC_009 ALM72469.1     13
 FORC16_2948   Vibrio vulnificus FORC_016 ANH64831.1     13
 FORC17_3002   Vibrio vulnificus FORC_017 ANN28065.1     13
 FORC36_2977   Vibrio vulnificus FORC_036 ARN67494.1     13
 FORC37_2919   Vibrio vulnificus FORC_037 ASC58613.1     13
 FORC54_3069   Vibrio vulnificus FORC_054 AUL97214.1     13
 FORC77_4368   Vibrio vulnificus FORC_077 QBH30091.1     13
 VVM_00119   Vibrio vulnificus MO6-24/O ADV88061.1     13
 AOT11_01580   Vibrio vulnificus NBRC 15645 = ATCC 27562 ASM98159.1     13
 BWZ32_23610   Vibrio vulnificus VV2014DJH AUJ37773.1     13
 VVA0059   Vibrio vulnificus YJ016 BAC96085.1
NP_936115.1
Q7MGB0   13
 BEN78_01850   Xanthomonas citri pv. mangiferaeindicae XC01 ASR44839.1     13
 XBW1_3510 (PulA)   Xenorhabdus bovienii CS03 CDM90868.1     13
 XBJ1_1072   Xenorhabdus bovienii SS-2004 CBJ80213.1 D3UXA1   13
 XDD1_1325 (PulA)   Xenorhabdus doucetiae FRM16 CDG17024.1     13
 A9255_09665   Xenorhabdus hominickii ANU1 AOM40836.1     13
 XNC2_1354   Xenorhabdus nematophila AN6/1 CEK22348.1     13
 XNC1_1393   Xenorhabdus nematophila ATCC 19061 CBJ89456.1 D3VAM0   13
 D3790_03590 (PulA)   Xenorhabdus nematophila YL001 AYA42420.1     13
 XPG1_2375 (PulA)   Xenorhabdus poinarii G6 CDG22031.1     13
 Xcel_0747   Xylanimonas cellulosilytica DSM 15894 ACZ29786.1 D1BXH6   13
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