Glycoside Hydrolase Family 13 / Subf 13

Activities in Familyα-amylase (EC 3.2.1.1); pullulanase (EC 3.2.1.41); cyclomaltodextrin glucanotransferase (EC 2.4.1.19); cyclomaltodextrinase (EC 3.2.1.54); trehalose-6-phosphate hydrolase (EC 3.2.1.93); oligo-α-glucosidase (EC 3.2.1.10); maltogenic amylase (EC 3.2.1.133); neopullulanase (EC 3.2.1.135); α-glucosidase (EC 3.2.1.20); maltotetraose-forming α-amylase (EC 3.2.1.60); isoamylase (EC 3.2.1.68); glucodextranase (EC 3.2.1.70); maltohexaose-forming α-amylase (EC 3.2.1.98); maltotriose-forming α-amylase (EC 3.2.1.116); branching enzyme (EC 2.4.1.18); trehalose synthase (EC 5.4.99.16); 4-α-glucanotransferase (EC 2.4.1.25); maltopentaose-forming α-amylase (EC 3.2.1.-) ; amylosucrase (EC 2.4.1.4) ; sucrose phosphorylase (EC 2.4.1.7); malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141); isomaltulose synthase (EC 5.4.99.11); malto-oligosyltrehalose synthase (EC 5.4.99.15); amylo-α-1,6-glucosidase (EC 3.2.1.33); α-1,4-glucan: phosphate α-maltosyltransferase (EC 2.4.99.16); 6'-P-sucrose phosphorylase (EC 2.4.1.-); amino acid transporter
Activities in Sub Family
Mechanism Retaining
ClanGH-H
3D Structure Status( β / α ) 8
Catalytic Nucleophile/BaseAsp (experimental)
Catalytic Proton DonorGlu (experimental)
NoteNew: many members have been assigned to subfamilies as described by Stam et al. (2006) Protein Eng Des Sel. 19, 555-562 (PMID: 17085431)
External resourcesCAZypedia; EBI Protein of the Month; HOMSTRAD; PDB Molecule of the Month; PRINTS;
Commercial Enzyme Provider(s)MEGAZYME; PROZOMIX;
Statistics GenBank accession (1164); Uniprot accession (87); PDB accession (26); 3D entries (4); cryst (0)
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Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 ASQ50_19705   Marinobacter sp. LQ44 AMQ90732.1     13
 C9I28_23680   Massilia armeniaca ZMN-3 AVR98305.1     13
 ACZ75_24300   Massilia sp. NR 4-1 AKU24107.1     13
 AM586_21075   Massilia sp. WG5 ALK98301.1     13
 AM586_23265   Massilia sp. WG5 ALK98680.1     13
 DPH57_05010   Massilia sp. YMA4 AXA90587.1     13
 DPH57_25620   Massilia sp. YMA4 AXA94215.1     13
 DIR46_18470   Massilia timonae CCUG 43427 AWL06220.1     13
 CR152_16000   Massilia violaceinigra B2 ATQ75862.1     13
 CR152_13795   Massilia violaceinigra B2 ATQ75473.1     13
 Mesil_1413   Meiothermus silvanus DSM 9946 ADH63306.1 D7BEV3   13
 MEBOL_002426   Melittangium boletus DSM 14713 ATB28977.1     13
 BOH66_02020   Microbacterium aurum KACC 15219 APZ33203.1     13
 DT073_04800 (PulA)   Microbacterium sp. ABRD_28 AZC13114.1     13
 Mag101_02070   Microbulbifer agarilyticus GP101 AQQ69328.1     13
 AUP74_00304 (PulA)   Microbulbifer aggregans CCB-MM1 AOS95776.1     13
 BTJ40_19085   Microbulbifer sp. A4B17 AWF82748.1     13
 A3224_12595   Microbulbifer thermotolerans DAU221 AMX03306.1     13
 MLP_06440   Microlunatus phosphovorus NM-1 BAK33658.1     13
 Micau_4260   Micromonospora aurantiaca ATCC 27029 ADL47773.1 D9T4W3   13
 DVH21_30350 (PulA)   Micromonospora aurantiaca H14(2018) AXH93852.1     13
 GA0070611_2570   Micromonospora auratinigra DSM 44815 SBT44116.1     13
 GA0070607_4477   Micromonospora coriariae DSM 44875 SCF01769.1     13
 GA0070614_1295   Micromonospora coxensis DSM 45161 SCG45185.1     13
 GA0070609_1294   Micromonospora echinaurantiaca DSM 43904 SCG43279.1     13
 GA0070610_1600   Micromonospora echinofusca DSM 43913 SCG15369.1     13
 GA0070618_4122   Micromonospora echinospora DSM 43816 SCF21625.1     13
 GA0070613_3875   Micromonospora inositola DSM 43819 SCG64659.1     13
 GA0070620_6334   Micromonospora krabiensis DSM 45344 SBV30733.1     13
 GA0070621_2923   Micromonospora narathiwatensis DSM 45248 SBT47507.1     13
 GA0074696_2548   Micromonospora purpureochromogenes DSM 43821 SCF07172.1     13
 GA0070623_5635   Micromonospora rifamycinica DSM 44983 SCG81261.1     13
 GA0074704_4336   Micromonospora siamensis DSM 45097 SCG67959.1     13
 MicB006_3254   Micromonospora sp. B006 AXO35534.1     13
 ML5_4043   Micromonospora sp. L5 ADU09553.1 D3C400   13
 CO540_29355   Micromonospora sp. WMMA2032 ATO17436.1     13
 CSH63_03330   Micromonospora tulbaghiae CNY-010 AYF26518.1     13
 GA0074695_2221   Micromonospora viridifaciens DSM 43909 SCE92852.1     13
 GA0070619_3750   Micromonospora zamorensis DSM 45600 SCG58088.1     13
 ABE85_04940   Mitsuaria sp. 7 ANH70274.1     13
 ABE85_02780   Mitsuaria sp. 7 ANH66755.1     13
 MVIS_1716   Moritella viscosa CED59689.1     13
 Namu_3513   Nakamurella multipartita DSM 44233 ACV79838.1 C8XET7   13
 CDO52_24750   Nocardiopsis gilva YIM 90087 ASU85582.1     13
 BN4615_P4870 (fragment)   Nonomuraea gerenzanensis ATCC 39727 SBO95354.1     13
 DV701_17070 (PulA)   Ornithinimicrobium sp. AMA3305 AXH97595.1     13
 C427_2238   Paraglaciecola psychrophila 170 AGH44347.1     13
 SAMN04489860_2346   Paraoerskovia marina DSM 22126 SDS77906.1     13
 AT984_10300   Paucibacter sp. KCTC 42545 ALT79773.1     13
 BST98_18020   Photobacterium damselae Phdp Wu-1 AWK83900.1     13
 PDPUS_2_00844 (fragment)   Photobacterium damselae subsp. piscicida 91-197 BAX55430.1     13
 H744_1c0754   Photobacterium gaetbulicola Gung47 AJR05779.1     13
 PBPRB1016   Photobacterium profundum SS9 CAG22888.1     13
 PAU_00091 (PulA)   Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 CAQ82184.1     13
 PluDJC_00590   Photorhabdus laumondii subsp. laumondii DJC AXG40949.1     13
 PluTT01m_00540   Photorhabdus laumondii subsp. laumondii TT01 AXG45462.1     13
 plu0105 (PulA)   Photorhabdus laumondii subsp. laumondii TTO1 CAE12400.1
NP_927475.1
Q7NA40   13
 A4R40_00525   Photorhabdus luminescens DSPV002N AWK44400.1     13
 VY86_08455   Photorhabdus thracensis DSM 15199 AKH63367.1     13
 SAMN04489867_0038   Phycicoccus dokdonensis DSM 22329 SDO56410.1     13
 C6W10_33375   Plantactinospora sp. BB1 AVT40538.1     13
 C6361_24820   Plantactinospora sp. BC1 AVT32151.1     13
 AAW51_4828   [Polyangium] brachysporum DSM 7029 AKJ31519.1     13
 Asphe3_36190   Pseudarthrobacter phenanthrenivorans Sphe3 ADX74720.1     13
 PAGA_a3661   Pseudoalteromonas agarivorans DSM 14585 ATC83767.1     13
 D9T18_15255   Pseudoalteromonas agarivorans Hao 2018 AYM87949.1     13
 B0W48_07010   Pseudoalteromonas aliena EH1 AQP99571.1     13
 PARC_a3734   Pseudoalteromonas arctica A 37-1-2 ATC88064.1     13
 Patl_1941   Pseudoalteromonas atlantica T6c ABG40459.1 Q15UH9   13
 D0907_01480   Pseudoalteromonas donghaensis HJ51 AXV64038.1     13
 CPA52_15085   Pseudoalteromonas issachenkonii ECSMB14103 ATG59471.1     13
 PNIG_a3598   Pseudoalteromonas nigrifaciens KMM 661 ASM55473.1     13
 PP2015_3632   Pseudoalteromonas phenolica KCTC 12086 ALO44106.1     13
 ATS72_012465   Pseudoalteromonas sp. 13-15 AUL74353.1     13
 AOR04_01055   Pseudoalteromonas sp. 1_2015MBL_MicDiv ATG76244.1     13
 D172_016350   Pseudoalteromonas sp. Bsw20308 ALQ09497.1     13
 CO724_04095   Pseudomonas mendocina MAE1-K ATH80387.1     13
 Pmen_4105   Pseudomonas mendocina ymp ABP86852.1 A4XZT6   13
 DM292_03915   Pseudomonas sp. R2A2 AWT09418.1     13
 C6Y50_00815   Pseudomonas stutzeri 1W1-1A AWK98559.1     13
 PST_2963   Pseudomonas stutzeri A1501 ABP80609.1 A4VNQ8   13
 PSTAB_3005   Pseudomonas stutzeri ATCC 17588 = LMG 11199 CGMCC 1.1803 AEJ06286.1     13
 A458_15510   Pseudomonas stutzeri CCUG 29243 AFM34327.1     13
 PSTAA_3129   Pseudomonas stutzeri DSM 4166 AEA85004.1     13
 C6Y58_16210   Pseudomonas stutzeri DW2-1 AWM60951.1     13
 Psest_1332   Pseudomonas stutzeri RCH2 AGA85890.1     13
 CXB48_15420   Pseudomonas stutzeri SGAir0442 AVX14083.1     13
 AB691_3208   Pseudomonas stutzeri SLG510A3-8 AKN28082.1     13
 Psesu_1111   Pseudoxanthomonas suwonensis 11-1 ADV26961.1     13
 WQ53_13715   Pseudoxanthomonas suwonensis J1 AKC87655.1     13
 pullulanase (PulA;HMPREF9690_00740) 3.2.1.41 Raoultella ornithinolytica 10-5246 EHT13411.1   2YOC[A,B] 13
 AN237_13505   Raoultella ornithinolytica 18 AOO57474.1     13
 HY59_03770   Raoultella ornithinolytica A14 ANZ04521.1     13
 RORB6_14370   Raoultella ornithinolytica B6 AGJ87555.1     13
 CRN13_21135   Raoultella ornithinolytica FDAARGOS_431 ATM22735.1     13
 BK817_05305   Raoultella ornithinolytica MG APB04425.1     13
 CA210_04365   Raoultella ornithinolytica Ro24724 ASI57523.1     13
 TE10_06550   Raoultella ornithinolytica S12 AJF71746.1     13
 CRT62_22000   Raoultella planticola FDAARGOS_429 ATM07111.1     13
 CRN15_12850   Raoultella planticola FDAARGOS_430 ATM15678.1     13
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