Glycoside Hydrolase Family 13 / Subf 13

Activities in Familyα-amylase (EC 3.2.1.1); pullulanase (EC 3.2.1.41); cyclomaltodextrin glucanotransferase (EC 2.4.1.19); cyclomaltodextrinase (EC 3.2.1.54); trehalose-6-phosphate hydrolase (EC 3.2.1.93); oligo-α-glucosidase (EC 3.2.1.10); maltogenic amylase (EC 3.2.1.133); neopullulanase (EC 3.2.1.135); α-glucosidase (EC 3.2.1.20); maltotetraose-forming α-amylase (EC 3.2.1.60); isoamylase (EC 3.2.1.68); glucodextranase (EC 3.2.1.70); maltohexaose-forming α-amylase (EC 3.2.1.98); maltotriose-forming α-amylase (EC 3.2.1.116); branching enzyme (EC 2.4.1.18); trehalose synthase (EC 5.4.99.16); 4-α-glucanotransferase (EC 2.4.1.25); maltopentaose-forming α-amylase (EC 3.2.1.-) ; amylosucrase (EC 2.4.1.4) ; sucrose phosphorylase (EC 2.4.1.7); malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141); isomaltulose synthase (EC 5.4.99.11); malto-oligosyltrehalose synthase (EC 5.4.99.15); amylo-α-1,6-glucosidase (EC 3.2.1.33); α-1,4-glucan: phosphate α-maltosyltransferase (EC 2.4.99.16); 6'-P-sucrose phosphorylase (EC 2.4.1.-); amino acid transporter
Activities in Sub Family
Mechanism Retaining
ClanGH-H
3D Structure Status( β / α ) 8
Catalytic Nucleophile/BaseAsp (experimental)
Catalytic Proton DonorGlu (experimental)
NoteNew: many members have been assigned to subfamilies as described by Stam et al. (2006) Protein Eng Des Sel. 19, 555-562 (PMID: 17085431)
External resourcesCAZypedia; EBI Protein of the Month; HOMSTRAD; PDB Molecule of the Month; PRINTS;
Commercial Enzyme Provider(s)MEGAZYME; PROZOMIX;
Statistics GenBank accession (1088); Uniprot accession (87); PDB accession (19); 3D entries (3); cryst (0)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 PAU_00091 (PulA)   Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 CAQ82184.1     13
 PluDJC_00590   Photorhabdus laumondii subsp. laumondii DJC AXG40949.1     13
 PluTT01m_00540   Photorhabdus laumondii subsp. laumondii TT01 AXG45462.1     13
 plu0105 (PulA)   Photorhabdus laumondii subsp. laumondii TTO1 CAE12400.1
NP_927475.1
Q7NA40   13
 A4R40_00525   Photorhabdus luminescens DSPV002N AWK44400.1     13
 VY86_08455   Photorhabdus thracensis DSM 15199 AKH63367.1     13
 SAMN04489867_0038   Phycicoccus dokdonensis DSM 22329 SDO56410.1     13
 C6W10_33375   Plantactinospora sp. BB1 AVT40538.1     13
 C6361_24820   Plantactinospora sp. BC1 AVT32151.1     13
 AAW51_4828   [Polyangium] brachysporum DSM 7029 AKJ31519.1     13
 Asphe3_36190   Pseudarthrobacter phenanthrenivorans Sphe3 ADX74720.1     13
 PAGA_a3661   Pseudoalteromonas agarivorans DSM 14585 ATC83767.1     13
 B0W48_07010   Pseudoalteromonas aliena EH1 AQP99571.1     13
 PARC_a3734   Pseudoalteromonas arctica A 37-1-2 ATC88064.1     13
 Patl_1941   Pseudoalteromonas atlantica T6c ABG40459.1 Q15UH9   13
 CPA52_15085   Pseudoalteromonas issachenkonii ECSMB14103 ATG59471.1     13
 PNIG_a3598   Pseudoalteromonas nigrifaciens KMM 661 ASM55473.1     13
 PP2015_3632   Pseudoalteromonas phenolica KCTC 12086 ALO44106.1     13
 ATS72_012465   Pseudoalteromonas sp. 13-15 AUL74353.1     13
 AOR04_01055   Pseudoalteromonas sp. 1_2015MBL_MicDiv ATG76244.1     13
 D172_016350   Pseudoalteromonas sp. Bsw20308 ALQ09497.1     13
 CO724_04095   Pseudomonas mendocina MAE1-K ATH80387.1     13
 Pmen_4105   Pseudomonas mendocina ymp ABP86852.1 A4XZT6   13
 DM292_03915   Pseudomonas sp. R2A2 AWT09418.1     13
 C6Y50_00815   Pseudomonas stutzeri 1W1-1A AWK98559.1     13
 PST_2963   Pseudomonas stutzeri A1501 ABP80609.1 A4VNQ8   13
 PSTAB_3005   Pseudomonas stutzeri ATCC 17588 = LMG 11199 CGMCC 1.1803 AEJ06286.1     13
 A458_15510   Pseudomonas stutzeri CCUG 29243 AFM34327.1     13
 PSTAA_3129   Pseudomonas stutzeri DSM 4166 AEA85004.1     13
 C6Y58_16210   Pseudomonas stutzeri DW2-1 AWM60951.1     13
 Psest_1332   Pseudomonas stutzeri RCH2 AGA85890.1     13
 CXB48_15420   Pseudomonas stutzeri SGAir0442 AVX14083.1     13
 AB691_3208   Pseudomonas stutzeri SLG510A3-8 AKN28082.1     13
 Psesu_1111   Pseudoxanthomonas suwonensis 11-1 ADV26961.1     13
 WQ53_13715   Pseudoxanthomonas suwonensis J1 AKC87655.1     13
 pullulanase (PulA;HMPREF9690_00740) 3.2.1.41 Raoultella ornithinolytica 10-5246 EHT13411.1   2YOC[A,B] 13
 AN237_13505   Raoultella ornithinolytica 18 AOO57474.1     13
 HY59_03770   Raoultella ornithinolytica A14 ANZ04521.1     13
 RORB6_14370   Raoultella ornithinolytica B6 AGJ87555.1     13
 CRN13_21135   Raoultella ornithinolytica FDAARGOS_431 ATM22735.1     13
 BK817_05305   Raoultella ornithinolytica MG APB04425.1     13
 CA210_04365   Raoultella ornithinolytica Ro24724 ASI57523.1     13
 TE10_06550   Raoultella ornithinolytica S12 AJF71746.1     13
 CRT62_22000   Raoultella planticola FDAARGOS_429 ATM07111.1     13
 CRN15_12850   Raoultella planticola FDAARGOS_430 ATM15678.1     13
 MC50_013000   Raoultella planticola FDAARGOS_64 AUU04697.1     13
 B1209_22340   Raoultella planticola GODA AUV55048.1     13
 DSD31_21055 (PulA)   Raoultella sp. X13 AXC31781.1     13
 REIFOR_03063   Reinekea forsetii Hel1_31_D35 ATX78182.1     13
 REIFOR_02823   Reinekea forsetii Hel1_31_D35 ATX77944.1     13
 CPZ87_04205   Rhizobacter gummiphilus NBRC 109400 ATU63824.1     13
 CPZ87_04205   Rhizobacter gummiphilus NBRC 109400 ATU63824.1     13
 A4W93_04125   Rhizobacter gummiphilus NS21 ARN23719.1     13
 RD2015_3650   Roseateles depolymerans KCTC 42856 ALV08105.1     13
 RGE_02680 (PulA)   Rubrivivax gelatinosus IL144 BAL93613.1     13
 Sde_0560 (PulA)   Saccharophagus degradans 2-40 ABD79824.1 Q21NA5   13
 HMF8227_00564   Salinimonas sp. HMF8227 AWL11060.1     13
 D0Y50_08990   Salinimonas sp. N102 AXR08462.1     13
 Strop_3061   Salinispora tropica CNB-440 ABP55498.1 A4X9D1   13
 Sked_28060   Sanguibacter keddieii DSM 10542 ACZ22708.1 D1BB07   13
 SGUI_2936   Serinicoccus sp. JLT9 ANS80332.1     13
 SGUI_2935   Serinicoccus sp. JLT9 ANS80331.1     13
 WN53_25290   Serratia fonticola DSM 4576 AKG72167.1     13
 CRN79_18720   Serratia fonticola FDAARGOS_411 ATM77743.1     13
 AV650_21015   Serratia fonticola GS2 ALX95868.1     13
 Sama_0287   Shewanella amazonensis SB2B ABL98498.1 A1S292   13
 type I pullulanase (Pul13A)   Shewanella arctica Kim et al. 2012 CED95594.1     13
 C8I07_14155   Shewanella baltica CW2 AVT48787.1     13
 Sbal195_1316   Shewanella baltica OS195 ABX48491.1 A9L5S4   13
 Sbal223_3074   Shewanella baltica OS223 ACK47559.1 B8EB17   13
 Sbal678_1347   Shewanella baltica OS678 ADT93524.1 D8CQW4   13
 SJ2017_3068   Shewanella japonica KCTC 22435 ARD23341.1     13
 swp_3411   Shewanella piezotolerans WP3 ACJ30110.1 B8CRV2   13
 ORF   Shewanella sp. CAL34055.1     13
 M5M_09665   Simiduia agarivorans SA1 = DSM 21679 AFU99116.1     13
 STAUR_7135   Stigmatella aurantiaca DW4/3-1 ADO74891.1 E3FZ74   13
 C7M71_006815 (PulA)   Streptacidiphilus sp. DSM 106435 AXI77190.1     13
 DMT42_11300   Streptomyces actuosus ATCC 25421 AWT42851.1     13
 SMD11_4847 (fragment)   Streptomyces albireticuli SMD11 ARZ70440.1     13
 SMD11_4848 (fragment)   Streptomyces albireticuli SMD11 ARZ70441.1     13
 SMD44_01120   Streptomyces alboflavus MDJK44 ARX81722.1     13
 DC74_2710   Streptomyces albulus NK660 AIA03210.1     13
 SAZ_14825   Streptomyces albulus ZPM AKA03584.1     13
 XNR_4650   Streptomyces albus J1074 AGI90972.1     13
 Salbus254_4914   Streptomyces albus SM254 AMM11367.1     13
 SAM23877_2312   Streptomyces ambofaciens ATCC 23877 AKZ55361.1     13
 SAM40697_2113   Streptomyces ambofaciens DSM 40697 ANB06073.1     13
 DVA86_09410 (PulA)   Streptomyces armeniacus ATCC 15676 AXK32835.1     13
 C5746_12165   Streptomyces atratus SCSIO_ZH16 AXE77576.1     13
 BV401_14180   Streptomyces autolyticus CGMCC0516 AQA11463.1     13
 SAV5982 (AmyX)   Streptomyces avermitilis MA-4680 = NBRC 14893 BAC73694.1
NP_827159.1
    13
 CVT27_07770   Streptomyces cavourensis 1AS2a ATY95401.1     13
 DTW94_07930 (PulA)   Streptomyces cavourensis TJ430 AXI71244.1     13
 D1794_21785 (PulA)   Streptomyces clavuligerus F1D-5 AXU15123.1     13
 BB341_20930   Streptomyces clavuligerus F613-1 ANW20496.1     13
 SCO2226 or SC10B7.21c   Streptomyces coelicolor A3(2) CAB90874.1
NP_626477.1
Q9KZ11   13
 B446_11665   Streptomyces collinus Tu 365 AGS69155.1     13
 TU94_09620   Streptomyces cyaneogriseus subsp. noncyanogenus NMWT 1 AJP01729.1     13
 BN159_6201   Streptomyces davaonensis JCM 4913 CCK30580.1     13
 C4B68_29085   Streptomyces dengpaensis XZHG99 AVH61497.1     13
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