Glycoside Hydrolase Family 136

Activities in Familylacto-N-biosidase (EC 3.2.1.140)
Mechanism Retaining
3D Structure Status( β )-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
NoteCreated after Yamada et al. (2017) Cell Chem Biol 24:515-524 (PMID=28392148)
External resourcesCAZypedia;
Statistics GenBank accession (187); Uniprot accession (2); PDB accession (3); 3D entries (1); cryst (0)
| 1 | 2 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 BK816_06410   Actinomyces sp. VUL4_3 AOZ72967.1    
 BK816_06415   Actinomyces sp. VUL4_3 AOZ72968.1    
 B737_7714   Amycolatopsis mediterranei RB AGT88375.1    
 AMES_7714   Amycolatopsis mediterranei S699 AEK46516.1
AFO81247.1
   
 AMED_7830   Amycolatopsis mediterranei U32 ADJ49538.1 D8HQB4  
 ART_3610   Arthrobacter sp. PAMC 25486 AIY03209.1    
 CGK93_06055   Arthrobacter sp. YN ASN19302.1    
 Sp245p_30225 (fragment)   Azospirillum brasilense Sp245 AWJ94082.1    
 BcellWH2_03604   Bacteroides cellulosilyticus WH2 ALJ60827.1    
 BA20089_08545   Bifidobacterium asteroides DSM 20089 ATO42142.1    
 BBBF_0451   Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456 BAQ97658.1    
 RY70_539   Bifidobacterium bifidum BF3 ALE10905.1    
 BBB_0436   Bifidobacterium bifidum BGN4 AFL04031.1    
 BBJK_02171   Bifidobacterium bifidum LMG 13195 JCM 7004 BBA48469.1    
 BBNG_00372   Bifidobacterium bifidum NCIMB 41171 EFR49825.1    
 NCTC13001_01805   Bifidobacterium bifidum NCTC13001 VEG19581.1    
 BBPR_0460   Bifidobacterium bifidum PRL2010 ADP35567.1    
 BBIF_0483   Bifidobacterium bifidum S17 ADO52688.1    
 BBTM_02523   Bifidobacterium bifidum TMC 3115 BBA56588.1    
 BcFMB_02000 (fragment)   Bifidobacterium choerinum FMB-1 ATU19904.1    
 BL105A_1470   Bifidobacterium longum 105-A BAP84094.1    
 B624_1386   Bifidobacterium longum 35624 AOL10836.1    
 BLONG_1620   Bifidobacterium longum E18 ESV34046.1    
 NCTC11818_01588   Bifidobacterium longum NCTC11818 VEG79925.1    
 BL1206_1622   Bifidobacterium longum subsp. longum AH1206 AOP01659.1    
 BBMN68_1789   Bifidobacterium longum subsp. longum BBMN68 ADQ02845.1    
 DVB78_07535   Bifidobacterium longum subsp. longum BORI AXF98988.1    
 lacto-N-biosidase (LnbX;BLLJ_1505) 3.2.1.140 Bifidobacterium longum subsp. longum JCM 1217 BAJ67172.1   5GQC[A,B,C,D,E,F,G,H]
5GQF[A,B]
5GQG[A,B]
 B8809_1381   Bifidobacterium longum subsp. longum NCIMB8809 ALO73052.1    
 ADH70_021230   Blautia coccoides YL58 ASU31098.1    
 ADH70_016435   Blautia coccoides YL58 ASU30251.1    
 A4V09_22570   Blautia sp. YL58 ANU78288.1    
 A4V09_17885   Blautia sp. YL58 ANU77449.1    
 CVS37_41215 (fragment)   Burkholderia lata A05 AYQ44322.1    
 DCN14_33570   Burkholderia sp. IDO3 AXK67544.1    
 BSTAB16_7306   Burkholderia stabilis VBB17091.1    
 HS1_001648   Candidatus Desulfofervidus auxilii HS1 AMM41442.1    
 NPD11_830   Clostridium baratii CDC51267 AQM59543.1    
 U729_2242   Clostridium baratii str. Sullivan AIY82891.1    
 U729_2180   Clostridium baratii str. Sullivan AIY85170.1    
 CP523_12350   Clostridium septicum DSM 7534 AYE35145.1    
 B5808_00365   Cnuibacter physcomitrellae XA(T) ARJ03856.1    
 CG806_09970   Enterococcus faecalis ARO1/DG AUC58662.1    
 BZG32_10695   Enterococcus faecalis CLB21560 AQL54136.1    
 CEQ02_11055   Enterococcus faecalis FDAARGOS_324 AVR92358.1    
 EGX75_09800   Enterococcus faecalis FDAARGOS_528 AYZ07512.1    
 ADH73_04490   Enterococcus faecalis KB1 ASU25406.1    
 KUB3006_C19000   Enterococcus faecalis KUB3006 BBD25474.1    
 KUB3007_C18990   Enterococcus faecalis KUB3007 BBD28515.1    
 NCTC8745_01754   Enterococcus faecalis NCTC8745 VEE96859.1    
 CVT43_09305   Enterococcus faecalis OG1RF AZV34515.1    
 A6B47_14315   Enterococcus faecalis sorialis ARV05068.1    
 A6B47_09725   Enterococcus faecalis sorialis ARV04112.1    
 DTO64_10490   Enterococcus faecalis TY1 AXG88960.1    
 EGCR1_00075   Enterococcus gilvus CR1 AXG37184.1    
 EI427_24315   Flammeovirga sp. L12M1 AZQ65341.1    
 EI427_21205   Flammeovirga sp. L12M1 AZQ64745.1    
 EI427_21470   Flammeovirga sp. L12M1 AZQ64797.1    
 EI427_22775   Flammeovirga sp. L12M1 AZQ65048.1    
 EI427_21215   Flammeovirga sp. L12M1 AZQ64747.1    
 EI427_21915   Flammeovirga sp. L12M1 AZQ64885.1    
 EI427_20755   Flammeovirga sp. L12M1 AZQ64657.1    
 EI427_21485   Flammeovirga sp. L12M1 AZQ64800.1    
 EI427_21295   Flammeovirga sp. L12M1 AZQ64763.1    
 EI427_22785   Flammeovirga sp. L12M1 AZQ65050.1    
 MY04_4402   Flammeovirga sp. MY04 ANQ51740.1    
 MY04_4401   Flammeovirga sp. MY04 ANQ51739.1    
 MY04_5116   Flammeovirga sp. MY04 ANQ52451.1    
 UJ101_00815 (SgsH)   Flavobacteriaceae bacterium UJ101 APD06352.1    
 UJ101_00817   Flavobacteriaceae bacterium UJ101 APD06354.1    
 SAMN04488552_2006   Gramella sp. MAR_2010_102 SDS07074.1    
 CFP65_4186   Kitasatospora sp. MMS16-BH015 AUG78941.1    
 CFP65_5896   Kitasatospora sp. MMS16-BH015 AUG80576.1    
 BGL52_13190   Lactobacillus casei LC5 ARY92660.1    
 DMC16_09075   Lactobacillus paracasei Lpc10 AWR91271.1    
 CFM84_11550   Lactobacillus paracasei ZFM54 AYG23690.1    
 BGK71_12685   Lactobacillus rhamnosus LR5 ASX18217.1    
 NCTC13710_02632   Lactobacillus rhamnosus NCTC13710 VEF30702.1    
 NCTC13764_02625   Lactobacillus rhamnosus NCTC13764 VEF64230.1    
 BVH57_01980   Lactobacillus rhamnosus Pen ARD31274.1    
 O159_17290   Leifsonia xyli subsp. cynodontis DSM 46306 AGW41771.1    
 VV02_16750 (fragment)   Luteipulveratus mongoliensis MN07-A0370 AKU17124.1    
 DAT561_p1004   Melissococcus plutonius DAT561 BBC61707.1    
 DAT585_p1005 (fragment)   Melissococcus plutonius DAT585 BBD15941.1    
 DAT606_p1005 (fragment)   Melissococcus plutonius DAT606 BBD17566.1    
 CXR34_06105   Microbacterium hominis SJTG1 AUG29084.1    
 CEP17_10540   Microbacterium sp. PM5 AXA96805.1    
 GA0070619_2963   Micromonospora zamorensis DSM 45600 SCG53694.1    
 SAMN04489834_2562   Microterricola viridarii DSM 21772 SDS97815.1    
 MuYL_1630   Mucilaginibacter sp. BJC16-A31 ASU33528.1    
 EGN60_00565 (fragment)   Mycoplasma sp. 237IA AZG68471.1    
 A8C56_08210   Niabella ginsenosidivorans BS26 ANH80966.1    
 PBLR_12611   Paenibacillus alvei SYX84189.1    
 Back11_37510   Paenibacillus baekrokdamisoli KCTC 33723 BBH22406.1    
 Back11_36550   Paenibacillus baekrokdamisoli KCTC 33723 BBH22310.1    
 Back11_36530 (fragment)   Paenibacillus baekrokdamisoli KCTC 33723 BBH22308.1    
 Back11_28980   Paenibacillus baekrokdamisoli KCTC 33723 BBH21553.1    
 Back11_04950   Paenibacillus baekrokdamisoli KCTC 33723 BBH19150.1    
 PBOR_19105   Paenibacillus borealis DSM 13188 AIQ58808.1    
 PBOR_12865   Paenibacillus borealis DSM 13188 AIQ57722.1    
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