Polysaccharide Lyase Family 17 / Subf 2

Mechanism b-elimination
3D Structure Status( α / α ) 6 toroid + anti-parallel β-sheet
NoteThe alginate lyase function has been shown for several members of the family
External resourcesCAZypedia;
Statistics GenBank accession (1); Uniprot accession (20); PDB accession (8); 3D entries (4); cryst (0)
Bacteria
Protein Name EC#ReferenceOrganismGenBank UniprotPDB/3DSubf
 oligoalginate lyase (Oal17A2; LQZ07_11290) 4.2.2.26
4.2.2.26
pubmed
pubmed
Agarivorans sp. B2Z047 UQN45019.1     2
 oligoalginate lyase (specificly acting on disaccharides) (Oal17A1; LQZ07_11285) 4.2.2.26
4.2.2.26
pubmed
pubmed
Agarivorans sp. B2Z047 UQN45018.1     2
 oligomannuronate lyase / oligoalginate lyase (MASE_04140) 4.2.2.- pubmed
Alteromonas macleodii ATCC 27126 AFS36377.1     2
 oligomannuronate lyase / exo-mannuronate lyase (BACEGG_03249) 4.2.2.- pubmed
Bacteroides eggerthii DSM 20697 WP_004291737.1
EEC52271.1
A0A380Z832   2
 exo-β-D-mannuronate-alginate lyase (BePL17;NQ546_02580) 4.2.2.- pubmed
Bacteroides eggerthii DSM 20697 UWN88380.1     2
 M-specific alginate lyase (BoPL17; OU990_24725) 4.2.2.3 pubmed
Bacteroides ovatus CP926 WII03611.1 A0A5M5BZE4 8BDD[A,B] 2
 alginate lyase (Alg2107; F8A90_10425) 4.2.2.- pubmed
Cobetia sp. cqz5-12 QQK64493.1     2
 exo-acting unsaturated oligoalginate lyase (Aly6; MY04_2549) 4.2.2.26
4.2.2.26
pubmed
pubmed
Flammeovirga sp. MY04 ANQ49918.2
ANQ49918.1
    2
 oligoalginate lyase (Oaly2) 4.2.2.26
4.2.2.26
pubmed
pubmed
Halomonas sp. QY114 AMR08482.1 A0A142GWF3   2
 oligoalginate lyase (Oaly1) 4.2.2.26
4.2.2.26
pubmed
pubmed
Halomonas sp. QY114 AMR08481.1 A0A142GWF2   2
 polyM-specific alginate lyase (AlgL17) 4.2.2.3 pubmed
Microbulbifer sp. ALW1 ATG71374.1 A0A3Q8CBV3 9IRQ[A,B] 2
 alginate lyase (AlgSH17; GNX18_13365) 4.2.2.3 pubmed
Microbulbifer sp. SH-1 QIL90639.1
QIJ31368.1
A0A6G7MA70   2
 oligomannuronate lyase / exo-mannuronate lyase (Nonul2377) 4.2.2.- pubmed
Nonlabens ulvanivorans WP_036584315.1 A0A084JVC5   2
 oligoalginate lyase (AlyM3; JFJ09_15375) 4.2.2.26
4.2.2.26
  Pseudoalteromonas arctica M9 MBZ2193586.1     2
 oligomannuronate lyase / exo-mannuronate lyase (Patl_3651) 4.2.2.- pubmed
Pseudoalteromonas atlantica T6c ABG42153.1 A0A9J9BDK0   2
 alginate lyase (Aly23) 4.2.2.- pubmed
Pseudoalteromonas carrageenovora ASY5 QWT68652.1 A0A8F2F481   2
 alginate lyase (AlyII) 4.2.2.3 pubmed
Pseudomonas sp. OS-ALG-9 BAA19848.1
ACK10579.1
O05937   2
 oligomannuronate lyase / exo-acting mannuronan lyase (Pedsa_1196) 4.2.2.- pubmed
Pseudopedobacter saltans DSM 12145 ADY51764.1 F0SD07   2
 exo-alginate lyase (AlyRM4) 4.2.2.26
4.2.2.26
pubmed
pubmed
Rhodothermus marinus MAT378 UVF39826.1     2
 oligomannuronate lyase / oligoalginate lyase (Sde_3284) (Alg17C) 4.2.2.- pubmed
Saccharophagus degradans 2-40 ABD82539.1
ACK10580.1
Q21FJ0 4NEI[A,B]
4OJZ[A,B]
4OK2[A,B]
4OK4[A,B]
2
 oligoalginate lyase (OalS17) 4.2.2.26
4.2.2.26
pubmed
pubmed
Shewanella sp. Kz7 AHW45238.1 A0A088CA41   2
 oligoalginate lyase (AlgL) 4.2.2.26
4.2.2.26
pubmed
pubmed
Sphingomonas sp. MJ-3 AEM45874.1
AEL31264.1
G0ZNC1
G1EH67
  2
 oligomannuronate lyase / exo-acting mannuronan lyase (Smlt2602) 4.2.2.- pubmed
Stenotrophomonas maltophilia K279a CAQ46078.1
B2FSW8.1
    2
 oligoalginate lyase (OAL) 4.2.2.26
4.2.2.26
doi
doi
Stenotrophomonas maltophilia KJ-2 / KCTC32000 AGM38186.2 T1RPY0   2
 oligoalginate lyase (Pl17A; AMOR_PL17A) 4.2.2.26
4.2.2.26
pubmed
pubmed
uncultured bacterium QMS47797.1 A0A7L7K5T5   2
 exo-alginate lyase IX (VpAly-IX; LZI70_17700) 4.2.2.26
4.2.2.26
pubmed
pubmed
Vibrio pelagius WXL662 UTT86193.1
USW90875.1
    2
 exo-alginate lyase VIII (VpAly-VIII; LZI70_17695) 4.2.2.26
4.2.2.26
pubmed
pubmed
Vibrio pelagius WXL662 UTT86192.1
USW90874.1
    2
 oligoalginate lyase (polyMG-specific) (OalB;V12B01_24214) 4.2.2.-
4.2.2.-
pubmed
pubmed
pubmed
pubmed
Vibrio splendidus 12B01 EAP93062.1 A3UWQ5   2
 oligoalginate lyase (polyM-specific) (OalC;V12B01_24219) 4.2.2.3 pubmed
Vibrio splendidus 12B01 EAP93063.1 A3UWQ6   2
 polyM-specific alginate lyase (zobellia_2624; Alya3) 4.2.2.3 pubmed
Zobellia galactanivorans DsijT CAZ96774.1 G0LCA3 7BJT[A,B]
7BM6[A,B]
2
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