Polysaccharide Lyase Family 6

Activities in FamilyAlginate lyase (EC 4.2.2.-);
Oligo-α-L-guluronate lyase / exo-acting α-L-guluronan lyase (EC 4.2.2.-);
Poly-(MG)-lyase / MG-specific alginate lyase (EC 4.2.2.-);
Poly(α-L-guluronate) lyase / G-specific alginate lyase (EC 4.2.2.11);
Chondroitinase B (EC 4.2.2.19);
Oligoalginate lyase / exo-alginate lyase (EC 4.2.2.26);
Poly(β-mannuronate) lyase / M-specific alginate lyase (EC 4.2.2.3);
Mechanism b-elimination
3D Structure Statusparallel β-helix
External resourcesCAZypedia;
Statistics GenBank accession (1059); Uniprot accession (24); PDB accession (19); 3D entries (10); cryst (0)
| 1 | ... | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D Subf
 VOI46_10615   Pseudoalteromonas sp. CuT 4-3 WRU74703.1     3
 VOI46_10665   Pseudoalteromonas sp. CuT 4-3 WRU71975.1     1
 ATS73_004230   Pseudoalteromonas sp. H100 WFO20538.1     1
 ATS73_004270   Pseudoalteromonas sp. H100 WFO19962.1     3
 RB214_06500   Pseudoalteromonas sp. HL-AS1 WMS92027.1     1
 RB215_08550   Pseudoalteromonas sp. HL-AS2 WMS93351.1     1
 JG479_10460   Pseudoalteromonas sp. LC2018020214 QQM63177.1     1
 JG479_10420   Pseudoalteromonas sp. LC2018020214 QQM63169.1     3
 PspMM1_21190   Pseudoalteromonas sp. MM1 BED89651.1     1
 PspMM1_21110   Pseudoalteromonas sp. MM1 BED89643.1     3
 EJ103_10680   Pseudoalteromonas sp. Xi13 AZN33168.1     1
 EJ103_10640   Pseudoalteromonas sp. Xi13 AZN34301.1     3
 PSHAa1749   Pseudoalteromonas translucida TAC125 CAI86821.1     1
 FSB84_21270   Pseudobacter ginsenosidimutans Gsoil 221 QEC46015.1     1
 FSB84_20480   Pseudobacter ginsenosidimutans Gsoil 221 QEC43938.1     2
 alginate lyase (AlyP) 4.2.2.3 Pseudomonas sp. OS-ALG-9 BAA01182.1 Q06365   1
 poly(α-L-guluronate) lyase / G-specific alginate lyase (Pedsa_0631) 4.2.2.11 Pseudopedobacter saltans DSM 12145 ADY51207.1 F0S7Y6   1
 chondroitinase B (Pedsa3807;Pedsa_3807) 4.2.2.19 Pseudopedobacter saltans DSM 12145 ADY54336.1 F0S763 7O78[A,B]
 alginate lyase (Pedsa_0632) 4.2.2.11
4.2.2.-
4.2.2.-
Pseudopedobacter saltans DSM 12145 ADY51208.1 F0S7Y7 7O7A[A,B]
7O84[A,B]
1
 Pedsa_0720   Pseudopedobacter saltans DSM 12145 ADY51296.1     1
 Pedsa_0722   Pseudopedobacter saltans DSM 12145 ADY51298.1     1
 Pedsa_0729   Pseudopedobacter saltans DSM 12145 ADY51305.1     1
 Pedsa_3622   Pseudopedobacter saltans DSM 12145 ADY54151.1     1
 poly-(MG)-lyase / MG-specific alginate lyase (Pedsa_3628) 4.2.2.-
4.2.2.-
Pseudopedobacter saltans DSM 12145 ADY54157.1 F0S4Y3 7O79[A]
 LAJ50_05040   Pseudoxanthomonas sp. X-1 UAY75623.1     1
 WQ53_03475   Pseudoxanthomonas suwonensis J1 AKC88161.1     1
 MUN68_012585   Psychroserpens ponticola MSW6 WCO00900.1     1
 MUN68_012560   Psychroserpens ponticola MSW6 WCO00895.1     1
 MUN68_016000   Psychroserpens ponticola MSW6 WCO01555.1     1
 E9099_09525   Psychroserpens sp. NJDZ02 QCE41643.1     1
 E9099_09505   Psychroserpens sp. NJDZ02 QCE41639.1     1
 LCM18_03175   Qipengyuania flava DP4Y115-4 UOR09549.1     1
 EKJ_07570   Qipengyuania flava KJ5 BBI19910.1     1
 N6L26_03445   Qipengyuania sp. SS22 UYH55631.1     1
 N6L26_12930   Qipengyuania sp. SS22 UYH54925.1     1
 N6H18_17835   Reichenbachiella agarivorans BKB1-1 UXP32203.1    
 N6H18_05320   Reichenbachiella agarivorans BKB1-1 UXP33371.1     1
 N6H18_00640   Reichenbachiella agarivorans BKB1-1 UXP32482.1     2
 N6H18_14510   Reichenbachiella agarivorans BKB1-1 UXP31561.1     1
 N7E81_02025   Reichenbachiella carrageenanivorans Wsw4-B4 UXX79882.1     1
 N7E81_09805   Reichenbachiella carrageenanivorans Wsw4-B4 UXX77663.1     2
 N7E81_12940   Reichenbachiella carrageenanivorans Wsw4-B4 UXX78264.1     1
 N7E81_14550   Reichenbachiella carrageenanivorans Wsw4-B4 UXX78578.1     1
 GQ464_011555   Rhodocaloribacter litoris ISCAR-4553 QXD14094.1     1
 GQ464_011550   Rhodocaloribacter litoris ISCAR-4553 QXD14093.1     1
 AWN76_018375   Rhodothermaceae bacterium RA ARA94927.1     1
 AWN76_013605   Rhodothermaceae bacterium RA ARA94086.1     2
 AWN76_018380   Rhodothermaceae bacterium RA ARA94928.1     1
 RmaAA213_12290   Rhodothermus marinus AA2-13 BBM69383.1     1
 RmaAA338_12310   Rhodothermus marinus AA3-38 BBM72366.1     1
 alginate lyase (AlyRm1; Rmar_1165) 4.2.2.11
4.2.2.-
4.2.2.-
Rhodothermus marinus DSM 4252 ACY48055.1 D0MHU7   1
 poly-(MG)-lyase / MG-specific alginate lyase (Rmar_1386) 4.2.2.-
4.2.2.-
Rhodothermus marinus DSM 4252 ACY48275.1 D0MIG7   2
 endo-alginate lyase (AlyRM1)   Rhodothermus marinus MAT378 UVF39825.1     1
 K4G66_19450   Tunicatimonas sp. TK19036 WKN34553.1     1
 FF011L_35080 (CslB) (fragment)   Roseimaritima multifibrata FF011L QDS94727.1    
 G5S37_13955 (fragment)   Roseimicrobium sp. ORNL1 QIF02581.1     1
 G5S37_16940 (fragment)   Roseimicrobium sp. ORNL1 QIF03136.1     2
 RZN69_02480   Puniceicoccus sp. CR14 WOO41939.1     1
 RZN69_21580 (fragment)   Puniceicoccus sp. CR14 WOO41221.1     1
 K0V07_05300   Ruficoccus sp. ZRK36 QYY36893.1    
 C2869_07275   Saccharobesus litoralis CCB-QB4 AWB68958.1    
 C2869_04350   Saccharobesus litoralis CCB-QB4 AWB65717.1    
 C2869_02780   Saccharobesus litoralis CCB-QB4 AWB68896.1     1
 poly-(MG)-lyase / MG-specific alginate lyase (Sde_0034) 4.2.2.-
4.2.2.-
Saccharophagus degradans 2-40 ABD79298.1
ACK10568.1
Q21PT1   2
 Sde_2873   Saccharophagus degradans 2-40 ABD82130.1
ACK10574.1
    3
 Sde_2873   Saccharophagus degradans 2-40 ABD82130.1
ACK10574.1
ACK10586.1
    3
 Sde_3274 (Alg6I)   Saccharophagus degradans 2-40 ABD82529.1
ACK10592.1
    1
 Sde_3275 (Alg6H)   Saccharophagus degradans 2-40 ABD82530.1
ACK10549.1
ACK10566.1
   
 Sde_3285 (Alg6B)   Saccharophagus degradans 2-40 ABD82540.1
ACK10548.1
ACK10565.1
    1
 QFX18_00385   Saccharophagus degradans FZY0027 WGO98520.1     2
 QFX18_04305   Saccharophagus degradans FZY0027 WGO99284.1    
 QFX18_04310   Saccharophagus degradans FZY0027 WGO99285.1     1
 QFX18_04255   Saccharophagus degradans FZY0027 WGO99274.1     1
 QFX18_06385   Saccharophagus degradans FZY0027 WGO99692.1     3
 QFX18_06385   Saccharophagus degradans FZY0027 WGO99692.1     3
 alginate lyase (AlgMytA)   Saccharophagus sp. Myt-1 BAK53380.1     3
 alginate lyase (AlgMytA)   Saccharophagus sp. Myt-1 BAK53380.1     3
 L3Q67_38900   Saccharothrix sp. AJ9571 UJW31100.1     2
 EKG83_21930   Saccharothrix syringae NRRL B-16468 QFZ19735.1     2
 IT774_12825   Salinimonas marina G2-b QPG05018.1     1
 D0Y50_18870   Salinimonas sediminis N102 AXR08236.1     1
 DB32_005387   Sandaracinus amylolyticus DSM 53668 AKF08238.1    
 I5071_3610   Sandaracinus amylolyticus MSr10575 UJR78334.1     2
 FO447_10060   Segatella copri YF2 QNT66846.1     1
 N1F78_02795   Seonamhaeicola sp. MEBiC1930 WXT98243.1     1
 N1F78_02805   Seonamhaeicola sp. MEBiC1930 WXT98245.1    
 N1F78_05055   Seonamhaeicola sp. MEBiC1930 WXT98679.1    
 N1F78_02790   Seonamhaeicola sp. MEBiC1930 WXT98242.1     1
 Sfri_3103   Shewanella frigidimarina NCIMB 400 ABI72940.1     1
 K8B83_19170   Shewanella inventionis D1489 UAL42912.1     1
 SJ2017_1080   Shewanella japonica KCTC 22435 ARD21411.1     1
 EGC82_17615   Shewanella livingstonensis LMG 19866 AZG74410.1     1
 EXU30_09995   Shewanella maritima D4-2 QBF82987.1    
 EXU30_09990   Shewanella maritima D4-2 QBF82986.1    
 FH971_04075   Shewanella polaris SM1901 QDE30216.1     1
 GUY17_16450   Shewanella sp. Arc9-LZ QHS14589.1     1
 oligoalginate lyase (polyG-block specific) (OalS6;AlgS6) 4.2.2.26
4.2.2.26
Shewanella sp. Kz7 AHC69713.1 W8DQS7   1
 FLM48_05755   Shewanella sp. Scap07 QLE84638.1     1
 AW14_12550   Siansivirga zeaxanthinifaciens CC-SAMT-1 AJR04954.1    
 AW14_12525   Siansivirga zeaxanthinifaciens CC-SAMT-1 AJR04354.1     1
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