Polysaccharide Lyase Family 6

Activities in FamilyAlginate lyase (EC 4.2.2.-);
Oligo-α-L-guluronate lyase / exo-acting α-L-guluronan lyase (EC 4.2.2.-);
Poly-(MG)-lyase / MG-specific alginate lyase (EC 4.2.2.-);
Poly(α-L-guluronate) lyase / G-specific alginate lyase (EC 4.2.2.11);
Chondroitinase B (EC 4.2.2.19);
Oligoalginate lyase / exo-alginate lyase (EC 4.2.2.26);
Poly(β-mannuronate) lyase / M-specific alginate lyase (EC 4.2.2.3);
Mechanism b-elimination
3D Structure Statusparallel β-helix
External resourcesCAZypedia;
Statistics GenBank accession (1059); Uniprot accession (24); PDB accession (19); 3D entries (10); cryst (0)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | ... | 11 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D Subf
 A8C56_15745   Niabella ginsenosidivorans BS26 ANH82221.1     2
 A8C56_19480   Niabella ginsenosidivorans BS26 ANH82877.1     1
 (NIASO_10845;Niaso_2008)   Niabella soli DSM 19437 AHF15521.1     2
 Niako_0682   Niastella koreensis GR20-10 AEV97065.1     2
 Niako_3531   Niastella koreensis GR20-10 AEV99832.1     2
 Niako_4993   Niastella koreensis GR20-10 AEW01232.1     2
 Niako_5224   Niastella koreensis GR20-10 AEW01461.1     1
 Niako_0272 (fragment)   Niastella koreensis GR20-10 AEV96670.1    
 DDD_0327   Nonlabens dokdonensis DSW-6 AGC75453.1     1
 DDD_0353   Nonlabens dokdonensis DSW-6 AGC75480.1     1
 R1T42_07300   Nonlabens ulvanivorans CI.11.F.A3 WOI21490.1     1
 R1T42_07180   Nonlabens ulvanivorans CI.11.F.A3 WOI24226.1     1
 alginate lyase (Nonul_2381) 4.2.2.11
4.2.2.-
4.2.2.-
Nonlabens ulvanivorans PLR KEZ92913.1 A0A084JVC9   1
 QUC32_13125   Novosphingobium resinovorum HR1a WJM28617.1     1
 BES08_00045   Novosphingobium resinovorum SA1 AOR75325.1     1
 TQ38_023945   Novosphingobium sp. P6W AXB79981.1     1
 DZC78_07870   Olleya aquimaris DAU311 AXO80305.1     1
 DZC78_07855   Olleya aquimaris DAU311 AXO80302.1     1
 CW732_00380   Olleya sp. Bg11-27 AUC74215.1     1
 CW732_00360   Olleya sp. Bg11-27 AUC74212.1     1
 H0I26_00435   Olleya sp. HaHaR_3_96 QXP60147.1     1
 H0I26_00415   Olleya sp. HaHaR_3_96 QXP60143.1     1
 F7C95_16295 (fragment)   Opitutae bacterium ISCC 51 QXD23467.1    
 F7C95_12895   Opitutae bacterium ISCC 51 QXD22834.1     1
 GA003_16195 (fragment)   Opitutae bacterium ISCC 52 QXD27539.1    
 GA003_12820   Opitutae bacterium ISCC 52 QXD26912.1     1
 Oweho_2210   Owenweeksia hongkongensis DSM 17368 AEV33184.1     1
 PBLR_12488   Paenibacillus alvei SYX84066.1     2
 PC41400_19590   Paenibacillus chitinolyticus KCCM 41400 QAV19742.1    
 PC41400_16075   Paenibacillus chitinolyticus KCCM 41400 QAV19113.1     2
 PDUR_05170   Paenibacillus durus DSM 1735 AIQ11428.1     2
 SK3146_02996 (Cslb_1)   Paenibacillus konkukensis SK3146 UQZ83789.1     2
 SK3146_05602 (Cslb_2)   Paenibacillus konkukensis SK3146 UQZ86309.1     2
 SK3146_05592 (Xyna1_24)   Paenibacillus konkukensis SK3146 UQZ86299.1    
 D5F53_15660   Paenibacillus lautus E7593-69 AYB44622.1    
 KIK04_23790   Paenibacillus sp. 481 UHA76294.1     2
 DVH26_23060 (fragment)   Paenibacillus sp. H1-7 ULL17067.1    
 DVH26_16490   Paenibacillus sp. H1-7 ULL15900.1    
 DVH26_06480   Paenibacillus sp. H1-7 ULL14122.1     2
 DVH26_23035   Paenibacillus sp. H1-7 ULL17062.1     2
 DVH26_27280   Paenibacillus sp. H1-7 ULL19979.1     2
 LOZ80_05320   Paenibacillus sp. HWE-109 UKS28360.1     2
 LOZ80_05345 (fragment)   Paenibacillus sp. HWE-109 UKS28363.1    
 LOZ80_05350   Paenibacillus sp. HWE-109 UKS31026.1    
 JNUCC31_01080   Paenibacillus sp. JNUCC-31 QOS79584.1     2
 JNUCC31_01110 (fragment)   Paenibacillus sp. JNUCC-31 QOS79589.1     2
 JNUCC32_11140   Paenibacillus sp. JNUCC32 QOT12529.1    
 MJB10_22435   Paenibacillus sp. MBLB1832 WNR43827.1     2
 H7F31_12430   Paenibacillus sp. PAMC21692 QNK59588.1    
 H7F31_12475   Paenibacillus sp. PAMC21692 QNK59596.1     2
 H7F31_12440 (fragment)   Paenibacillus sp. PAMC21692 QNK59590.1     2
 K2F33_22055   Paenibacillus sp. PSB04 UYO02428.1    
 D3H65_05270   Paraflavitalea soli 5GH32-13 AXY73421.1     2
 D3H65_15600   Paraflavitalea soli 5GH32-13 AXY75320.1     2
 D3H65_19195   Paraflavitalea soli 5GH32-13 AXY75977.1    
 D3H65_19225   Paraflavitalea soli 5GH32-13 AXY75982.1     1
 exo-alginate lyase (polyG-specific) (AlyGC) 4.2.2.- Paraglaciecola chathamensis S18K6T WP_007984897.1 A0A1S4NYD7
A0A1S4NYD8
A0A656LHA2
5GKD[A,B,C,D]
5GKQ[A,B]
1
 FX988_03251   Paraglaciecola mesophila GPM4 QHJ12993.1     1
 FX988_03277   Paraglaciecola mesophila GPM4 QHJ13019.1     1
 FX988_03375   Paraglaciecola mesophila GPM4 QHJ13116.1     3
 HFP51_00425   Parasphingopyxis sp. CP4 QLC20781.1     1
 CHN51_02470   Parasphingorhabdus flavimaris YGSMI21 ATW02512.1     1
 HF685_13555   Parasphingorhabdus halotolerans sp. JK6 QJB70187.1     1
 FYC62_01005   Pedobacter aquae CJ43 QEK50405.1     1
 FYC62_01010   Pedobacter aquae CJ43 QEK53191.1     1
 AY601_1657   Pedobacter cryoconitis PAMC 27485 AMP98572.1     1
 QG516_07560 (fragment)   Pedobacter gandavensis WB7 WGQ11510.1     1
 QG516_25140   Pedobacter gandavensis WB7 WGQ09802.1     1
 CPT03_04505   Pedobacter ginsengisoli T01R-27 ATP55779.1     1
 poly-(MG)-lyase / MG-specific alginate lyase (Phep_3223) 4.2.2.-
4.2.2.-
Pedobacter heparinus DSM 2366 ACU05418.1 C6Y3X5   2
 chondroitinase B (CslB;ChnB;Phep_0789) 4.2.2.19 Pedobacter heparinus DSM 2366 ACU03011.1
AAC83384.1
AAE46726.1
ABC06960.1
ABJ38857.1
ACK03140.1
Q46079 1DBG[A]
1DBO[A]
1OFL[A]
1OFM[A]
 LOK61_06600 (fragment)   Pedobacter mucosus Q8-18 UKT65450.1    
 H9L23_01485 (fragment)   Pedobacter roseus KACC 11594 QNN42816.1    
 G7074_00430   Pedobacter sp. HDW13 QIL37884.1     1
 G7074_00435   Pedobacter sp. HDW13 QIL37885.1     1
 AQ505_11675   Pedobacter sp. PACM 27299 ALL06092.1     1
 AQ505_07330 (fragment)   Pedobacter sp. PACM 27299 ALL05317.1     1
 H7F33_08115   Pedobacter sp. PAMC26386 QNK64429.1     1
 OVA16_06885   Pedobacter sp. SL55 WAC42075.1     2
 OVA16_18505   Pedobacter sp. SL55 WAC40533.1     1
 OVA16_18510   Pedobacter sp. SL55 WAC40534.1     1
 BFS30_18155   Pedobacter steynii DX4 AOM78923.1     1
 BFS30_00355   Pedobacter steynii DX4 AOM80550.1     1
 AM2010_1737   Pelagerythrobacter marensis KCTC 22370 AKM07803.1     1
 NCF86_09625   Pelagerythrobacter marinus E6 USA38586.1     1
 T8T98_02420   Pelagerythrobacter marinus OXR-96 WPZ07388.1     1
 PEPS_32330   Persicobacter psychrovividus NBRC 101262 BDD00953.1     1
 PEPS_32230   Persicobacter psychrovividus NBRC 101262 BDD00943.1     1
 PEPS_00850   Persicobacter psychrovividus NBRC 101262 BDC97804.1     2
 PEPS_32630   Persicobacter psychrovividus NBRC 101262 BDD00983.1     1
 H744_1c1636   Photobacterium gaetbulicola Gung47 AJR06654.1    
 endolytic alginate lyase   Photobacterium lutimaris FC615 QGJ83311.1    
 PTW35_27120   Photobacterium sp. DA100 WEM44922.1    
 IPV69_22840 (fragment)   Phycisphaerales bacterium M1803 QOV89029.1     1
 Pla175_02610 (CslB) (fragment)   Pirellulimonas nuda Pla175 QDU86907.1     1
 MACH26_09760   Planctobacterium marinum Dej080120_11 BDX05455.1     3
 MACH26_09670   Planctobacterium marinum Dej080120_11 BDX05446.1     1
 CA11_36700 (CslB) (fragment)   Planctomycetes bacterium CA11 QDU15842.1     1
 HG66A1_37420 (CslB)   Planctomycetes bacterium HG66A1 QDT21937.1     1
 K239x_35180 (CslB)   Planctomycetes bacterium K23_9 QDT11520.1     1
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